Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000081 00000 ------------ - 0.81 0.52 0.67 + 0.19 0.48 0.33 0000 --- --- --- --- 000449 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 000540 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000586 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000650 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 000658 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 000695 00000 ------------ C 0.88 0.75 0.82 T 0.12 0.25 0.18 0000 --- --- --- --- 000922 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001319 00000 ------------ C 0.93 0.76 0.85 T 0.07 0.24 0.15 0000 --- --- --- --- 001456 00000 ------------ G 0.89 0.74 0.81 A 0.11 0.26 0.19 0000 --- --- --- --- 001532 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001711 00000 ------------ - 0.06 0.02 0.04 + 0.94 0.98 0.96 0000 --- --- --- --- 001795 00000 ------------ G 0.95 0.86 0.90 A 0.05 0.14 0.10 0000 --- --- --- --- 001821 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001830 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 001913 00000 ------------ - 0.04 0.23 0.13 + 0.96 0.77 0.87 0000 --- --- --- --- 002381 00000 ------------ G 0.93 0.91 0.92 A 0.07 0.09 0.08 0000 --- --- --- --- 002767 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 002800 00000 ------------ - 0.73 0.86 0.79 + 0.27 0.14 0.21 0000 --- --- --- --- 002927 00000 ------------ C 0.83 0.91 0.87 G 0.17 0.09 0.13 0000 --- --- --- --- 003004 00000 ------------ G 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 003061 00000 ------------ G 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 003062 00000 ------------ A 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 003114 00000 ------------ A 0.73 0.86 0.79 C 0.27 0.14 0.21 0000 --- --- --- --- 003418 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 003781 00000 ------------ T 0.88 0.83 0.85 G 0.12 0.17 0.15 0000 --- --- --- --- 003988 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004191 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004393 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 004414 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004437 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 004565 00000 ------------ - 0.54 0.50 0.52 + 0.46 0.50 0.48 0000 --- --- --- --- 004658 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004861 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004941 00000 ------------ T 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 004983 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 005024 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 005573 00000 ------------ - 0.17 0.11 0.14 + 0.83 0.89 0.86 0000 --- --- --- --- 006204 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 006294 00000 ------------ - 0.83 0.89 0.86 + 0.17 0.11 0.14 0000 --- --- --- --- 006297 00000 ------------ C 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 006362 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 006443 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 006542 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 006666 00000 ------------ G 0.62 0.50 0.56 A 0.38 0.50 0.44 0000 --- --- --- --- 006805 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006895 00000 ------------ C 0.70 0.75 0.73 T 0.30 0.25 0.27 0000 --- --- --- --- 007074 00000 ------------ - 0.07 0.27 0.18 + 0.93 0.73 0.82 0000 --- --- --- --- 007139 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 007179 00000 ------------ - 0.17 0.11 0.14 + 0.83 0.89 0.86 0000 --- --- --- --- 007180 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007270 00000 ------------ A 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 007314 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007445 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 007531 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 007619 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 007793 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008087 00000 ------------ - 0.81 0.83 0.82 + 0.19 0.17 0.18 0000 --- --- --- --- 008191 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 008215 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 008530 00000 ------------ A 0.74 0.74 0.74 G 0.26 0.26 0.26 0000 --- --- --- --- 008588 00000 ------------ A 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 008782 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 009114 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009386 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009407 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 009652 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 009962 00000 ------------ G 0.79 0.67 0.73 C 0.21 0.33 0.27 0000 --- --- --- --- 010012 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 010063 00000 ------------ T 0.88 0.80 0.84 C 0.12 0.20 0.16 0000 --- --- --- --- 010587 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010623 00000 ------------ C 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 010740 00000 ------------ T 0.91 0.91 0.91 G 0.09 0.09 0.09 0000 --- --- --- --- 011170 00000 ------------ A 0.69 0.52 0.61 C 0.31 0.48 0.39 0000 --- --- --- --- 011237 00000 ------------ T 0.94 0.75 0.85 C 0.06 0.25 0.15 0000 --- --- --- --- 011275 00000 ------------ - 0.12 0.20 0.16 + 0.88 0.80 0.84 0000 --- --- --- --- 011336 00000 ------------ A 0.92 0.91 0.91 T 0.08 0.09 0.09 0000 --- --- --- --- 011403 00000 ------------ - 0.31 0.48 0.39 + 0.69 0.52 0.61 0000 --- --- --- --- 011652 00000 ------------ C 0.96 0.78 0.87 G 0.04 0.22 0.13 0000 --- --- --- --- 011667 00000 ------------ C 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 011759 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 011966 00000 ------------ G 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 012140 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012563 00000 ------------ T 0.81 0.80 0.81 C 0.19 0.20 0.19 0000 --- --- --- --- 012751 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 013183 00000 ------------ G 0.83 0.89 0.86 C 0.17 0.11 0.14 0000 --- --- --- --- 013380 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 013418 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013958 00000 ------------ T 0.83 0.89 0.86 C 0.17 0.11 0.14 0000 --- --- --- --- 013969 00000 ------------ G 0.81 0.83 0.82 A 0.19 0.17 0.18 0000 --- --- --- --- 014012 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 014091 00000 ------------ G 0.92 0.91 0.91 A 0.08 0.09 0.09 0000 --- --- --- --- 014100 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 014303 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014346 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 014691 00000 ------------ A 0.79 0.67 0.73 G 0.21 0.33 0.27 0000 --- --- --- --- 014761 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014868 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 015013 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 015385 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015568 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015569 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015588 00000 ------------ C 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 015678 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015758 00667 SYNON T 0.96 0.78 0.87 C 0.04 0.22 0.13 0214 AAT AAC ASN(N) ASN(N) 015861 00770 NON-SYN C 0.83 0.89 0.86 G 0.17 0.11 0.14 0249 CAA GAA GLN(Q) GLU(E) 015919 00828 NON-SYN G 0.92 1.00 0.96 A 0.08 0.00 0.04 0268 CGA CAA ARG(R) GLN(Q) 016051 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016168 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016183 00000 ------------ - 0.73 0.75 0.74 + 0.27 0.25 0.26 0000 --- --- --- --- 016237 00000 ------------ - 0.17 0.11 0.14 + 0.83 0.89 0.86 0000 --- --- --- --- 016249 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 016258 00000 ------------ G 0.83 0.89 0.86 C 0.17 0.11 0.14 0000 --- --- --- --- 016294 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 016349 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 016458 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016460 00000 ------------ G 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 016890 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016925 00000 ------------ - 0.91 0.73 0.82 + 0.09 0.27 0.18 0000 --- --- --- --- 016936 00000 ------------ G 0.84 1.00 0.91 A 0.16 0.00 0.09 0000 --- --- --- --- 017118 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 017135 00000 ------------ G 0.98 0.80 0.89 A 0.02 0.20 0.11 0000 --- --- --- --- 017139 00000 ------------ C 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 017254 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017269 00000 ------------ - 0.02 0.09 0.06 + 0.98 0.91 0.94 0000 --- --- --- --- 017539 00000 ------------ G 0.85 0.93 0.88 A 0.15 0.07 0.12 0000 --- --- --- --- 017823 00000 ------------ G 0.55 0.52 0.53 C 0.45 0.48 0.47 0000 --- --- --- --- 018159 01146 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018382 01369 3' UTR T 0.69 0.87 0.78 C 0.31 0.13 0.22 0000 --- --- --- --- 018412 01399 3' UTR C 0.92 0.76 0.84 A 0.08 0.24 0.16 0000 --- --- --- --- 018427 01414 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018472 01459 3' UTR A 0.71 0.76 0.73 G 0.29 0.24 0.27 0000 --- --- --- --- 018517 01504 3' UTR G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 018906 01893 3' UTR A 0.71 0.98 0.84 G 0.29 0.02 0.16 0000 --- --- --- --- 019425 00000 ------------ T 0.83 0.70 0.77 G 0.17 0.30 0.23 0000 --- --- --- --- 019720 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 020425 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020689 00000 ------------ A 0.92 0.76 0.84 G 0.08 0.24 0.16 0000 --- --- --- --- 020738 00000 ------------ T 0.83 0.74 0.79 C 0.17 0.26 0.21 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000081: A 000449: T 000658: CAA 001711: GGA 001830: TTGTGACGAAGCGCGCATGCGCGCTTCGCACCC 001913: GG 002800: T 004393: T 004565: A 005573: G 006294: TCT 006443: TT 007074: TTTC 007179: T 008087: TGAC 009407: TCTA 011275: TTAATA 011403: TAT 016183: TA 016237: GT 016249: T 016925: G 017269: GCACT