Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000423 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000434 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 001028 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 001426 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001551 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 002281 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002285 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 002383 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002568 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002603 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 002648 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002785 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 002994 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003060 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003443 00000 ------------ - 0.61 0.02 0.32 + 0.39 0.98 0.68 0000 --- --- --- --- 003479 00000 ------------ G 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 003694 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003765 00000 ------------ C 0.50 0.98 0.73 G 0.50 0.02 0.27 0000 --- --- --- --- 004185 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 004263 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 005622 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005651 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 005688 00000 ------------ C 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 005690 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005846 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005869 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006117 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007301 00000 ------------ G 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 007413 00000 ------------ G 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 007528 00000 ------------ - 0.79 1.00 0.89 + 0.21 0.00 0.11 0000 --- --- --- --- 007539 00000 ------------ - 0.21 0.00 0.11 + 0.79 1.00 0.89 0000 --- --- --- --- 007669 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007888 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 007889 00000 ------------ A 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 007890 00000 ------------ A 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 007891 00000 ------------ A 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 008102 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 008104 00000 ------------ T 0.39 0.98 0.69 C 0.61 0.02 0.31 0000 --- --- --- --- 008397 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 008482 00000 ------------ G 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 008575 00000 ------------ A 0.79 1.00 0.91 C 0.21 0.00 0.09 0000 --- --- --- --- 008600 00000 ------------ C 0.64 0.98 0.81 T 0.36 0.02 0.19 0000 --- --- --- --- 008652 00000 ------------ T 0.40 0.98 0.67 C 0.60 0.02 0.33 0000 --- --- --- --- 008653 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 008718 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009005 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 009159 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009238 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 009413 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 009451 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 009505 00000 ------------ A 0.88 1.00 0.95 C 0.12 0.00 0.05 0000 --- --- --- --- 009606 00000 ------------ - 0.25 0.00 0.10 + 0.75 1.00 0.90 0000 --- --- --- --- 009918 00000 ------------ A 0.41 0.97 0.67 G 0.59 0.03 0.33 0000 --- --- --- --- 010702 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 010942 00000 ------------ A 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 011030 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011084 00000 ------------ T 0.70 1.00 0.85 G 0.30 0.00 0.15 0000 --- --- --- --- 011427 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 011429 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 011594 00148 5' UTR G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011650 00204 5' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011779 00333 SYNON G 0.95 1.00 0.98 T 0.05 0.00 0.02 0039 CTG CTT LEU(L) LEU(L) 011982 00000 ------------ T 0.48 0.98 0.73 C 0.52 0.02 0.27 0000 --- --- --- --- 012199 00000 ------------ A 0.48 0.98 0.72 G 0.52 0.02 0.28 0000 --- --- --- --- 012434 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 012482 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 012547 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 013033 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 013166 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013198 00000 ------------ C 0.52 0.98 0.76 A 0.48 0.02 0.24 0000 --- --- --- --- 013256 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 013297 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013636 00000 ------------ C 0.48 0.98 0.72 T 0.52 0.02 0.28 0000 --- --- --- --- 013682 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 014152 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014192 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014429 00000 ------------ C 0.60 0.98 0.78 T 0.40 0.02 0.22 0000 --- --- --- --- 014456 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 014851 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014868 00000 ------------ A 0.48 0.98 0.72 G 0.52 0.02 0.28 0000 --- --- --- --- 014936 00000 ------------ T 0.48 0.98 0.72 C 0.52 0.02 0.28 0000 --- --- --- --- 014995 00000 ------------ A 0.48 0.98 0.72 G 0.52 0.02 0.28 0000 --- --- --- --- 015024 00000 ------------ T 0.48 0.98 0.72 C 0.52 0.02 0.28 0000 --- --- --- --- 015208 00000 ------------ G 0.48 0.98 0.72 A 0.52 0.02 0.28 0000 --- --- --- --- 015211 00000 ------------ T 0.54 0.98 0.76 C 0.46 0.02 0.24 0000 --- --- --- --- 015363 00000 ------------ C 0.48 0.98 0.73 T 0.52 0.02 0.27 0000 --- --- --- --- 015655 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 015749 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015752 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015885 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 016187 00000 ------------ C 0.44 0.98 0.70 G 0.56 0.02 0.30 0000 --- --- --- --- 016246 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 016926 00000 ------------ T 0.57 0.98 0.77 C 0.43 0.02 0.23 0000 --- --- --- --- 017164 00000 ------------ C 0.46 0.98 0.72 T 0.54 0.02 0.28 0000 --- --- --- --- 017340 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 017417 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 017540 00000 ------------ G 0.52 0.97 0.74 C 0.48 0.03 0.26 0000 --- --- --- --- 017551 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 017598 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 017677 00000 ------------ T 0.52 0.97 0.74 C 0.48 0.03 0.26 0000 --- --- --- --- 017786 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017963 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017968 00000 ------------ G 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 018111 00000 ------------ T 0.50 0.98 0.73 C 0.50 0.02 0.27 0000 --- --- --- --- 018161 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 018438 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 018449 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 018468 00000 ------------ - 0.56 0.98 0.77 + 0.44 0.02 0.23 0000 --- --- --- --- 018517 00000 ------------ G 0.57 0.98 0.77 A 0.43 0.02 0.23 0000 --- --- --- --- 018627 00000 ------------ G 0.52 0.98 0.76 A 0.48 0.02 0.24 0000 --- --- --- --- 018910 00000 ------------ C 0.44 0.98 0.70 G 0.56 0.02 0.30 0000 --- --- --- --- 018917 00000 ------------ T 0.44 0.98 0.70 G 0.56 0.02 0.30 0000 --- --- --- --- 019330 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019360 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019549 00000 ------------ G 0.83 0.98 0.90 A 0.17 0.02 0.10 0000 --- --- --- --- 019563 00000 ------------ G 0.54 0.98 0.76 A 0.46 0.02 0.24 0000 --- --- --- --- 019693 00000 ------------ T 0.44 0.98 0.70 A 0.56 0.02 0.30 0000 --- --- --- --- 019782 00000 ------------ A 0.54 0.98 0.76 G 0.46 0.02 0.24 0000 --- --- --- --- 019865 00000 ------------ G 0.54 0.97 0.74 A 0.46 0.03 0.26 0000 --- --- --- --- 020019 00685 NON-SYN T 0.52 0.98 0.74 C 0.48 0.02 0.26 0157 TGC CGC CYS(C) ARG(R) 020127 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020972 00000 ------------ A 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 021007 00000 ------------ C 0.59 0.98 0.78 T 0.41 0.02 0.22 0000 --- --- --- --- 021061 00000 ------------ T 0.54 0.98 0.76 C 0.46 0.02 0.24 0000 --- --- --- --- 021226 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 021561 01188 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0324 TAC TAT TYR(Y) TYR(Y) 021600 01227 SYNON G 0.97 1.00 0.99 A 0.03 0.00 0.01 0337 CTG CTA LEU(L) LEU(L) 021669 01296 SYNON G 0.48 0.98 0.73 A 0.52 0.02 0.27 0360 ACG ACA THR(T) THR(T) 021832 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022024 01348 NON-SYN A 0.52 0.98 0.75 G 0.48 0.02 0.25 0378 ATG GTG MET(M) VAL(V) 022283 00000 ------------ T 0.59 0.98 0.78 C 0.41 0.02 0.22 0000 --- --- --- --- 022469 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022628 01608 SYNON C 1.00 0.80 0.90 T 0.00 0.20 0.10 0464 AAC AAT ASN(N) ASN(N) 023150 00000 ------------ G 0.57 0.98 0.77 A 0.43 0.02 0.23 0000 --- --- --- --- 023309 00000 ------------ C 0.57 0.98 0.77 G 0.43 0.02 0.23 0000 --- --- --- --- 023587 01860 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0548 AAC AAT ASN(N) ASN(N) 023805 00000 ------------ A 0.57 0.98 0.78 G 0.43 0.02 0.22 0000 --- --- --- --- 023925 00000 ------------ - 0.43 0.02 0.22 + 0.57 0.98 0.78 0000 --- --- --- --- 024253 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024433 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024437 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 024712 02016 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0600 ACC ACT THR(T) THR(T) 024715 02019 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0601 ACG ACA THR(T) THR(T) 024790 02094 SYNON A 0.50 0.98 0.72 G 0.50 0.02 0.28 0626 GGA GGG GLY(G) GLY(G) 024961 00000 ------------ G 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 025008 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025336 02258 NON-SYN T 0.50 0.98 0.73 C 0.50 0.02 0.27 0681 ATG ACG MET(M) THR(T) 025376 02298 SYNON T 0.96 1.00 0.98 C 0.04 0.00 0.02 0694 AAT AAC ASN(N) ASN(N) 025401 02323 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0703 CTG TTG LEU(L) LEU(L) 025569 02491 3' UTR - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 025998 00000 ------------ A 0.65 0.98 0.82 G 0.35 0.02 0.18 0000 --- --- --- --- 026054 00000 ------------ T 0.52 0.98 0.76 C 0.48 0.02 0.24 0000 --- --- --- --- 026085 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026161 00000 ------------ - 0.47 0.02 0.23 + 0.53 0.98 0.77 0000 --- --- --- --- 026414 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 026990 00000 ------------ T 0.44 0.98 0.70 C 0.56 0.02 0.30 0000 --- --- --- --- 027706 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 028016 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002285: A 003443: C 007528: CA 007539: T 009451: TCT 009606: AATAC 013033: GTT 018468: TGAATGAA 023925: A 025569: G 026161: G 028016: A