TRADD Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

CAGCACGGTC TCTCAGGGAC AGGTGGCGGA AGATGAGTGC CAGCACCTCC 50 TCTGGCAGTC CCTCTCCAGG CTCGGCCATG GCCCAGATCC GGCTGGGGTG 100 GGAGGATCCG CCACTCCCAA TAGCTCCGGC CTGGAGAGAG ACGGACGTCT 150 CTGAGGTCGG GAAGGCGCAA AGTGTTGCAG GAAGACCGAG CTTAGGTGTA 200 CAAATGCTTG TGGCCTGAGG AACTGAGGGC CTCTCAGACA GCGTGGGGCA 250 | REPEAT TCAGATAACC CCGAAACTTG TTCACAAAGC AGATTTCACC GCCTCACCTA 300 CTAAATCAGG CTCTCCGGAA AGGGTAAGGC CCAGGAATCT GCATTTCAAC 350 | var(316):[T:0.05] AAGCCCCTGT GACTCCACAG GTTCCACGTT GAGAACTCCC CTCCCACTTT 400 | REPEAT TTTTTTTTTT TTTCTTTTTT TTTGAGACAG GGTCTCGCTC TTTACCCAGG 450 CTGGAGTGCA GTGGCGCAAT CACAACTCAC TGCACCCTCA GTCTCCCGGG 500 CTCAAGCAAT CCTCCCACCT CAGCCTCCCG AGTAGCTGGG ACTACAGGGG 550 CACGCCACCA CGCCTGGCTA ATTTTTGTAA TTTTGTTGCA GAGACGAGGT 600 CTCGCTTTGT TGCCCAGACT GACCTCGAAC TCCTAGGCTC AAGCGATCGG 650 CCCGCCTGGG CCTCCCAAAG TGCTGGGATT ACGGGCATGA GCCACCGCGC 700 CCGGCCTGAG AAACCCCATC TTAACCCCGC CGGTTAGTAG AAAGTGACTA 750 CAGGGTTAAT AAGGCGGGAG CGTTAATGTA GGCTTTTCTT TGTCAGGGAC 800 CATGAGCCAA TCAGGAAGCG AGGCGTGGGC GGGGCAAAGC TGGATCCACC 850 CCTGGAGGGG AGGCTCCTTC CCCGCCTCCG CCTCGCCGGG GAGATGTCCC 900 | var(887):[T:0.06] GGGTGCTTCC TAAGACAGCC CCACTGGATG AAAAAAAACT TGGGTCTCTG 950 GGACCTGACG GTTCTGGGGC CTGAGGGGCT CAAGATTTAA GTTCCGACCC 1000 CTGAGCAGCC CTGGCTCCCG CTGAGCAATT TGGGTTCGGC TGGAACTCCG 1050 CAGACCCACC CTGGAGCGCA GCCTTTAGAG GGGGATGGGT TACTGGAAAG 1100 TGTGCGTCCT CTTTGAAGTT GCCAATCCTG TTTGTTTTTG TTTTGTTTTG 1150 | REPEAT TTTTGAGACG GAATCTAGCT GTGTCGCCCA GGCTGGAGTG CAGTGGCGAG 1200 ATCTCGGCTC ACTGCAAACT CCGCCTCGCG GGTTCAAGCG ATTCTTCTGC 1250 CTCAGCCTCC CGAGTAGCTG GGACTCCAGG CGCGCGCCAC CTCGCCGGGC 1300 TAATTTTTGT ATTTTTAGTA GAGACGGGGT TTCACCATAT TGGCCAGGCT 1350 GGTCTCAAAC TCCTGACCTC AGGTGATCCA CCTGCCTCGG CCTTCCAAAG 1400 TGCTGGGATT ACAGGCGTGA GCCACCGCGC CCGGCCGCCA ATCTTGTTTT 1450 AAGGTTCTTA AAGGTTTGTG TACACAAGGC TTCACACTAC TCGCCAGTTA 1500 ATGTTCCCAT ATCTTCCGGG CTAACAGTTT CTCCCGGAAT TTGTGCCACG 1550 TGTTTCCTGG GGCTTCAGAT ACGTTCGGCC GGGCTTGTAC CTGGGACCCA 1600 TGGGCACCCC GTTTTGAGTG CCCACTGGTA GCAGCGATCT TGAAGCCGGA 1650 TCCCCAGGGG TACCAGAAAA TTCTGGTCTC CAGGGGGCGC CCCCTTGATT 1700 TACCGAAGTC TGGCAGCTGT AGCTCTTACG AGCCCCCCGC CTCGTAAGAA 1750 TCGCAAACCC CCAAAGTCGG GTCTTCCTGC CGTCTAACCT TGGGCGCTGG 1800 TGTCTTACCT GCTCGGCGGA CCAGATGGGC TTTGCCCGGG GCAGGGGACT 1850 GGCAGCAGAG GACAGCGGAC GGGAAGCAGC CACCGGGAGC CCGCGGGGCG 1900 GGACGCGCGG GCGGACGGGG CGGCTCGGGC TAGGGCACCG CCCCAGCGCC 1950 TCCGCGCACA CCCGGAAGCG GCGGAGTAGA GCGGAGCCTG GCGGGCGTGG 2000 | Exon 1 | UTR GAACCCAGGC CCCGCCGAGG CGGCCAGGTT AGTGCAGCAG GTGGGTGGGT 2050 GGGCTCCCCG GTGCGGGCGG GAGAGGAGGT GGATCTTGGC TCCGAAGCGT 2100 GGGCGCGGCG CAGATGTCAC CGGCGGCTGC TCCAGCCAGC TGGTGGCGGC 2150 GGTCTACTGA GCTGTTCGAA CACCGTGGGA GGCGGGGGAC GGTACGGAAT 2200 TTGGCCCCCG CAGGCTCCTC GTCCCTGCCA GCACTTTCGA GGTGCAGTAG 2250 GGCCCTGCAG GAGAGAGGGT GGGGGAGAAG GGGCTGGTTC TGAATACTTT 2300 CCTTGAGCGG AGACCCCCTT GCCCACCCCA GCCGATCGCA CGTGCGAAAC 2350 CCCAGCTTGA GGGTGGGCTA GTGGGAGCCT GGGAAGCTCC CCTCAAGCGC 2400 TCGGGAGCTG CGTAGCTGAG TAGGGGGTGT GCCCGGCGGG TCGCAAGGAG 2450 TCACAGGCTT TCAGTTCTGG GCCACGCCCA CAGGCTGTCT CTGTCCACCC 2500 AGCCAGAGGT GGGGCTGCCC CCGGGACTGT TAGGTGTTCA GGGGGCACCG 2550 TGCGTGGCTC GTCCCTGGAA ACAGGCGCAG AAGTTGTTAG GTCGGTACCT 2600 AAGCGCCCCA CAGTCTCCGG CCACCAAACT TTCTCAGGAC CCAGCCTGGA 2650 AGCCTCAGCC CCGCCCAAAA AGGGACGACT CCTGGTGGGT GGGGCGCGGG 2700 GCTTCCCAAG GAGGGGCTTC CGTGAAAGAA CACGTAAGAA GAGCTGCCAG 2750 TCGGCGGATG CGAAACTAGG GCCCTGGCCT CTTTACCCTG TTAACTCGAC 2800 CTCCAGCCTG GTTCACCTTC CCCATCTTCT AGTACTAGTG AGTGTGAGAA 2850 AGCATCCCCA GTCTCCAGGT TCCCAGTACT CCCCACCTCC CCCTCGACCC 2900 CCACAGACCT GATGGGCAGA CAATGGTCCT GTTCGGTCCC CACTTCCACC 2950 CCTTGGGGTG GGACCATAAC CAAGTCAAGC ACTCTCAAGT CAAGGGGCCA 3000 GAAAGACATG AAAGAGGGAA TGTTTCCAGG GGAAGTTCCC ACTCTCTCCT 3050 ACTCCCCAGG CCACTTTCGA AGGACTCCCC CCTTATCTCA CCTCCGTGGC 3100 TGGCTCCCTA TTATGGACCC ACTTGTCACC TGCAGAGTTT CCTGTTTTTT 3150 CTTGTTTTGC TTTTAAAGAA AACAAATTTA TTTTGCTCTT TTAATACAAA 3200 GAAAATATGT CTACTTCACA TAAAGCAGAA AATATTGCTA AATACAAAGA 3250 AAATAAAAAT CACCCACAAT CCTTCCCCAC CCCCACCTAC CTTCCTTCAT 3300 CCTGCCCAGA GATAAACAAA ATGCAAACTT CCTGTTACTA TCCAGACTGT 3350 GGTTTGGCGT AAGTACACAA GTATTAATGT TTTCTATGAA AAGATTAGAA 3400 GGCTGGGTGT GGTGCCTCAC ACCTGTAACC CAGCACTTTG GGAAGCTGAG 3450 | REPEAT GTGGGCAGAT CGCTTGAGCC CAGGAGTTTG AGACCAGCCT GGGCAACATG 3500 GTGAAACTCC ATCTCTACTA AAAATACAAA AACTAGCCAG GCATGGCGGC 3550 GTGTGCCTAA AGTCCCAGCT ACTTGAAAGG TTGAGGTGAG AGGGTTGCTT 3600 GAGCTGGGAA GGTCAAGGCT GCAGTGAGCT GCGATAGTGC CACTGCACTC 3650 CAGCCTGGGT GACAGAGCAA GACCCTGTCT CAAAAACAAG ACAATTGAAA 3700 AAACAAAGGT CGAGAGTAGT GCCTTACTCC TGTAATCGCA GCACTTTGGG 3750 | REPEAT | var(3741):[C:0.01] AGGCCAGGGC AGGAGGACAG CTTCCTGTTC CTCATGTAAA CAGATGGCAG 3800 CTGGGCCACC CCATCTGTCC TGCCCCATAG CTAACACTCA ACACTCCTCT 3850 TAGCCCACCA TATATAAACC CTGATGACTG GAGAGTACAG GAGTGTGACT 3900 | var(3878):[:0.68] GATGGGGCAG GAGGTAGGGC CTTGAGCCCA TGATTATAGG AAAAGGGTGG 3950 GTAGGAAAAG GGTGAGGTGG GGAGAAAGAG GAGGCAGTTT TCTACTTGCT 4000 GTCTCACGGG GTAGTAACTG GGAGACCATT GAGCTGTAGG TCAGTGCAGT 4050 GGTTCCTTGG CTGGGAATTT TGCCCCCGCT GGTCCAGAGC TAGGTTTTTG 4100 | var(4058):[C:0.04] | var(4077):[G:0.04] TCAGAAGATG GAGGAAGGAG ATACTATACT AGCACCAAGG GGCCCTGGCT 4150 TTTTCTGGAC AGGGAAGGAA TAGAGCAATT TGTGTTGGAA ATGACTGGAG 4200 | var(4163):[C:0.02] | REPEAT CCGAACTCCA AGGGCTTTAT AACAAAAAGG AATTATTTAG CTCACATAAC 4250 TGAAAAGTCC AGTGTGCAAT GGCTTCAGGG ACGGCTGGAT CCAGGGGCCT 4300 AGTATGCTTA GGAATGCACT TCTCCATCTC TTGACTCTTT CTTTCTGTGT 4350 CAGCTTCATT CCCAGCCAGG CTCTTCCCAA GCAGTGCTAA AGGAGAGCTA 4400 CCTTTTCCTT CCAGTTCAGC CCCAAGGGAA GGGAAAGTAG TGCCTCTTTC 4450 CTATTGGCTC AACCAGAGTC GCAGCGTTGA TTCTCATGGG TCCAACTTAA 4500 GTCCTATACC CCGCCCTGAA CTAATCACTG CAGAAATGTG AATGGAATAT 4550 GCAGATTGGC CAGGTCTGGT ACACAAGCCC GACCTGGAAC TAGGGAGTGG 4600 GACACAGGCA CATGGATTGA GAAGAGGGAG GAGGGAAGTC CCCAAAGGTA 4650 AGTCAGGCTT GGGGAGAGAA TCTGGGTAGA TGCAAACTAC AGGTGCCCTT 4700 CGAAGTGAAG ACAGGAGGTT TAGTCTTAGG CTGAGGTCCT CCAGAAATGC 4750 TGGGCTCAAG TCTACTCAGA AGGCAAGGCC AGGATATGGG TCTGGTTGGC 4800 TTTGGGGCAT GGGCACCATC CAGAATGAAG ATGTCTCTTG TCCGCATTGG 4850 | var(4802):[G:0.01] TAAGAGAGAC ACACAGGCCT GAGAAGGAAG CAGAGAAGCC CCATTGCAGG 4900 ATCTGCCTCT GCTCCCCCTC CACTGTGACC TTGGGCTCTT TCTCCAAGAA 4950 GGCAGTGGAG GGACAGTCCT CACTGCAAGC CTGGGGCGGG TGGGACTCTG 5000 TACAGAGCCA GGAGCTCAAG GGGCTTCCTG TGAGATGGTG AACTCCTGTC 5050 CCAAGTATGC CAACCAGTGG TGGGGACAAC TGAACCATGT GGGACTTGAG 5100 GCTACTGTGG TGGGGACAGC TGAACCACGT GGGGCTGGGT AGTTGTCTCC 5150 AGGGTGGAGG GAGGGGGGAT GAACTGGATA CCTGACTGTC TGCATCTCCA 5200 GGAGGTGAGA TGGCAGCTGG GCAAAATGGG CACGAAGAGT GGGTGGGCAG 5250 | Exon 2 | UTR M A A G Q N G H E E W V G S 14 CGCATACCTG TTTGTGGAGT CCTCGCTGGA CAAGGTGGTC CTGTCGGATG 5300 A Y L F V E S S L D K V V L S D 30 CCTACGCGCA CCCCCAGCAG AAGGTGGCAG TGTACAGGGC TCTGCAGGCT 5350 A Y A H P Q Q K V A V Y R A L Q A 47 GCCTTGGCAG GTGCGTGGAT GGGCGGGCAT GTGGAGAGGA AGGGGTGGCC 5400 A L A 50 TGGAGCATTT TGTGGGTGGG CCTGGGTTTA GCCACCTTTA AGAAGAAGAT 5450 TTGGGGTGGG AGGAGCAAGA CGGAGGACCC CTGGCTGTGC AGACTCTCTT 5500 CTTTGCTTGT GGCATGACCT TGAGGATAGG CGTGTGTTCT CGAGTCTGTG 5550 TATGATTTAC CAATTTGTGC ACTAACGTCC TTTGCTCCAT CCCCGCCCCC 5600 CTCCACCAGC CGGCTCACTC CTTTCTACTA ATTGTGGATG TCTCTCTCCT 5650 | var(5609):[C:0.09] CTTTTCCTCT CTTACTGCAG CACTCCTTGC TCAAGACCCC TCCCCAGTAC 5700 CTACCCTTCC AGGCCCCCCT TTCCCATCTC AGGGCAGAGG CCACAGGAGG 5750 | var(5746):[A:0.01] CTGAAGCGGG TTGGGGGATC TGTTCGTGGC CTCAGAGCGG CGAGAGCCCC 5800 | var(5796):[C:0.07] | var(5799):[A:0.04] TCTTCTTCCC GAGCAGTGGG AGTCGCGCTT GGTGGAGGCC GAAGACCTGA 5850 GACCTCTCGC CCTCCTCTGC CCTGCTGGCC GCCTACCCAG ACGGCTTGTT 5900 TGCCCAGGGC ACACGCCCCC TTTTCTGTGC TTCGAAGTCC CTCTCTTTTG 5950 CCAACCCTCA TTTGGGGCGT GAGAGCGGGG GTTAGGTGGC ACCCACTCTG 6000 TCTTAGGGTG CTCCCTGTGA CAGATCCTGG TCTTCTTTCT GGGTTATTGC 6050 TGTTTGTATC CCAATTTTGC TTCCCAGCTG GGTACTCTGG GGTAACTGCA 6100 | NOT SCANNED CCCTAGGTCA GGGGATGGGA CGCGGGGCTT CACCACGGGC TTCGCCCCTC 6150 CTCCGGCCGT TTGGAGAACG GCCGAGCTTG GGGACCGCCC GGCGCCTGAC 6200 CGCCCGCCTC CGCAGAGAGC GGCGGGAGCC CGGACGTGCT GCAGATGCTG 6250 | Exon 3 E S G G S P D V L Q M L 62 AAGATCCACC GCAGCGACCC GCAGCTGATC GTGCAGCTGC GATTCTGCGG 6300 K I H R S D P Q L I V Q L R F C G 79 GCGGCAGCCC TGTGGCCGCT TCCTCCGCGC CTACCGCGAG GGGGCGCTGC 6350 R Q P C G R F L R A Y R E G A L 95 GCGCCGCGCT GCAGAGGAGC CTGGCGGCCG CGCTCGCCCA GCACTCGGTG 6400 R A A L Q R S L A A A L A Q H S V 112 CCGCTGCAAC TGGAGCTGCG CGCCGGCGCC GAGCGGCTGG ACGCTTTGCT 6450 P L Q L E L R A G A E R L D A L L 129 GGCGGACGAG GAGCGCTGTT TGAGTTGCAT CCTAGCCCAG CAGGTGCGGC 6500 A D E E R C L S C I L A Q Q 143 CGGGCTAGGG TCAGGATGGG GTAGGGCGGG GATCCGCGGT TAAGTCCCCC 6550 | var(6525):[A:0.02] GTGACGGCAC GTTCCATTCC CCTAGCCCGA CCGGCTCCGG GATGAAGAAC 6600 | Exon 4 P D R L R D E E 151 TGGCTGAGCT GGAGGATGCG CTGCGAAATC TGAAGTGCGG CTCGGGGGCC 6650 L A E L E D A L R N L K C G S G A 168 CGGGGTGGCG ACGGGGAGGT CGCTTCGGCC CCCTTGCAGC CCCCGGTGCC 6700 R G G D G E V A S A P L Q P P V P 185 CTCTCTGTCG GAGGTGAAGC CGCCGCCGCC GCCGCCACCT GCCCAGACTT 6750 S L S E V K P P P P P P P A Q T 201 TTCTGTTCCA GGGTCAGCCT GTAGGTGAGG CGCAGGTGGA GAGGCGGGGT 6800 F L F Q G Q P V 209 CACCAGGAGG TTGGAGTCTG GGGAGGGGCA GGGGTCGTTG CCGGGTGGGG 6850 ATGGGTGGGA CCGGCGCTGG GGGTCCCCGC CCTCACCCCG TTTCCCCACT 6900 CCCTCTGCAG TGAATCGGCC GCTGAGCCTG AAGGACCAAC AGACGTTCGC 6950 | Exon 5 V N R P L S L K D Q Q T F A 223 GCGCTCTGTG GGTCTCAAAT GGCGCAAGGT GGGGCGCTCA CTGCAGCGAG 7000 R S V G L K W R K V G R S L Q R 239 GCTGCCGGGC GCTGCGGGAC CCGGCGCTGG ACTCGCTGGC CTACGAGTAC 7050 G C R A L R D P A L D S L A Y E Y 256 GAGCGCGAGG GACTGTACGA GCAGGCCTTC CAGCTGCTGC GGCGCTTCGT 7100 E R E G L Y E Q A F Q L L R R F V 273 GCAGGCCGAG GGCCGCCGCG CCACGCTGCA GCGCCTGGTG GAGGCACTCG 7150 Q A E G R R A T L Q R L V E A L 289 AGGAGAACGA GCTCACCAGC CTGGCAGAGG ACTTGCTGGG CCTGACCGAT 7200 E E N E L T S L A E D L L G L T D 306 CCCAATGGCG GCCTGGCCTA GACCAGGGGT GCAGCCAGCT TTTGGAGAAC 7250 | UTR P N G G L A 312 CTGGATGGCC TTAGGGTTCC TTCTGCGGCT ATTGCTGAAC CCCTGTCCAT 7300 CCACGGGACC CTGAAACTCC ACTTGGCCTA TCTGCTGGAC CTGCTGGGGC 7350 | var(7330):[C:0.04] AGAGTTGATT GCCTTCCCCA GGAGCCAGAC CACTGGGGGT GCATCATTGG 7400 GGATTCTGCC TCAGGTACTT TGATAGAGTG TGGGGTGGGG GGGACCTGCT 7450 TTGGAGATCA GCCTCACCTT CTCCCATCCC AGAAGCGGGG CTTACAGCCA 7500 GCCCTTACAG TTTCACTCAT GAAGCACCTT GATCTTTGGT GTCCTGGACT 7550 | REPEAT TCATCCTGGG TGCTGCAGAT ACTGCAGTGA AGTAAAACAG GAATCAATCT 7600 | var(7584):[T:0.06] TGCCTGCCCC CAGCTCACAC TCAGCGTGGG ACCCCGAATG TTAAGCAATG 7650 ATAATAAAGT ATAACACGGA TTTTGATGTG AGAAATACAA GTAGTAGTGG 7700 | REPEAT CTTACACCTG TAATCCCAAC AATTTGGGAG ACAGAGATAG GAGGATTGCT 7750 TGAGCTCAGG AGTTTGAGAC CAGCCTGGGT AGTCCCAGCC ACTTAGGAGG 7800 CTGAGGTGGG AGGATCCCTG GAGCATGGAA GGTTGAGGCT GCAGTGAGAT 7850 | var(7826):[C:0.04] GTCACTGAGC TACTGCACTC CAGCCTGGGT GACAGAGTGA GACCCTGTCT 7900 CAAAAAAAAA AAAAAAAAAA GAAAGAAAAA AAAAGAGAAG TTGTGGAGGA 7950 TGGAGGAAGG GGCCTAACCT GGGCAGGGGA CAGGGGGTAG GCTTCCTGGA 8000 GGAGATGAGT GTGAGTAGGC ATAGGGGTGG GCTATCGAGA GAAGGGCAGT 8050 GTTCGGGGCA CAGTCTCAGG CAAGGGCTTG AGGAAGGCTT GTGGGTTTTT 8100 CAATGAGGCC AGTAGGAAGC CTTTGAAGAG TTTCGGGAGT TAAGACTGGG 8150 AGGTGGTTGT TTTTTTTTTT TTTTTAATTT TAATTTTTTT TCAGATGGAG 8200 | REPEAT CTTCACTCTT ATTTCCCAGG CTGTAGTGTA ATGGCACGTT TTTGGCTCAC 8250 TGCAACCTCC ACCTCCTGGG TTCAAGCAAT TCTCCTGTTT CAGCCTCCCA 8300 AGTAGCTGGG ATTACAGGCG CCCACCACCA TGCCCAGCTA ATTTTGTATT 8350 | var(8326):[G:0.01] TTTAGTAGAG ATGGGGTTTC TCCATGTTGG TCAGGCTGGT CTCAAACTCC 8400 TGACCTCAGG TGATCCACCC ACCTTGGTCT CCCAAAGTGC TGGGATTACA 8450 GGCATGTGCC ACCGCACCTG GCCAAGACTG GGAGGTTGAT GAGGATGGGG 8500 GTGGGGGAAA TGGTGGCCCC AGGCTGGGGC AGTAGCAGCA GAGATGGAGG 8550 GAAGGGGATG ACCACCAAAG AGCTGTGTGG GTGGAAGAGT AACAGGCCTG 8600 | var(8562):[A:0.05] GTGACACTGG GTGAGGAATG GCTGAGAGAG GGCCCCAAGT TTCTGCCTTT 8650 GCCAGTTGGA TGGTGGGTGG GACTGCTTGC TGGGATGGGG CCCTGGGGGG 8700 AAATGAAATG CTTGCTCTGT TTGGGACAAG TTGAGCATGA TGTTCCTGCA 8750 GTGCATCCGG GGAGAGAGTA TGAGGGTAGT TGGGTCTGTA GTTCTGAGTT 8800 CAGGATGAGG GTTCAATCTA AAGATTGATG AATAGACAGG TGGGGAGTGG 8850 | var(8845):[:0.37] GTGGGGTGGC CCCAGGGGAT GTCCTGAAGG ACACCAACCA GAATGGGAAC 8900 AGCCAAAGAG GAAGGAGGAA AACCAGGAGA TTTGGAAACC AGGGGATTAC 8950 CCACCCACTA TAATGGAGCG GGTAGTCAAG ACCGAGGAGT GTCTGTTGGA 9000 CT