Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000118 AA 3 7 10 AG 9 13 22 GG 6 1 7 0.015 2.545 0.710 000130 AA 0 0 0 AG 0 2 2 GG 18 19 37 0.000 0.053 0.027 000356 CC 17 21 38 CT 3 1 4 TT 0 0 0 0.131 0.012 0.105 000511 AA 0 0 0 AG 0 1 1 GG 20 21 41 0.000 0.012 0.006 000653 AA 0 0 0 AC 1 2 3 CC 23 21 44 0.011 0.048 0.051 000685 AA 0 0 0 AG 4 1 5 GG 20 22 42 0.198 0.011 0.148 001020 CC 23 19 42 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 001148 AA 0 0 0 AG 0 1 1 GG 22 18 40 0.000 0.014 0.006 001684 AA 0 0 0 AG 1 0 1 GG 20 23 43 0.012 0.000 0.006 002066 -- 0 0 0 +- 1 0 1 ++ 21 16 37 0.012 0.000 0.007 002766 -- 18 21 39 +- 1 0 1 ++ 1 0 1 8.183 0.000 17.537 003299 CC 4 5 9 CG 8 12 20 GG 4 6 10 0.000 0.048 0.027 004311 AA 0 0 0 AC 2 0 2 CC 21 20 41 0.048 0.000 0.024 004584 AA 20 18 38 AG 4 0 4 GG 0 0 0 0.198 0.000 0.105 004591 CC 20 18 38 CT 4 0 4 TT 0 0 0 0.198 0.000 0.105 004914 CC 5 15 20 CT 13 4 17 TT 4 0 4 0.747 0.263 0.019 005346 CC 1 3 4 CG 16 12 28 GG 6 5 11 4.874 0.900 4.906 005814 CC 23 21 44 CT 1 1 2 TT 0 0 0 0.011 0.012 0.023 005837 AA 3 7 10 AG 14 12 26 GG 7 3 10 0.960 0.362 0.783 005901 CC 24 21 45 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 005931 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 005958 AA 3 7 10 AT 13 9 22 TT 8 7 15 0.421 1.087 0.133 006388 CC 21 18 39 CT 3 1 4 TT 0 0 0 0.107 0.014 0.102 006553 CC 20 17 37 CG 4 2 6 GG 0 0 0 0.198 0.059 0.242 006671 AA 24 20 44 AG 0 2 2 GG 0 0 0 0.000 0.050 0.023 006874 AA 17 23 40 AG 4 0 4 GG 0 0 0 0.233 0.000 0.100 006914 AA 16 10 26 AG 4 10 14 GG 1 3 4 1.037 0.040 1.010 007777 GG 0 0 0 GT 1 0 1 TT 20 21 41 0.012 0.000 0.006 007798 AA 2 4 6 AG 8 7 15 GG 11 9 20 0.093 1.284 1.209 008021 CC 23 19 42 CT 0 1 1 TT 0 0 0 0.000 0.013 0.006 008085 CC 6 4 10 CG 12 9 21 GG 6 10 16 0.000 0.591 0.394 008212 AA 0 0 0 AG 1 0 1 GG 23 22 45 0.011 0.000 0.006 008289 CC 20 23 43 CT 4 0 4 TT 0 0 0 0.198 0.000 0.093 008355 -- 3 1 4 +- 9 1 10 ++ 11 20 31 0.277 9.075 4.201 008660 AA 19 12 31 AG 3 7 10 GG 2 3 5 5.958 1.223 5.998 008682 AA 21 22 43 AT 2 0 2 TT 1 0 1 4.959 0.000 10.478 008820 AA 0 0 0 AG 1 0 1 GG 18 23 41 0.014 0.000 0.006 008948 AA 1 0 1 AG 1 1 2 GG 21 22 43 9.521 0.011 10.478 009198 CC 19 23 42 CT 3 0 3 TT 1 0 1 2.457 0.000 6.146 009289 CC 1 3 4 CT 1 8 9 TT 20 12 32 9.075 0.733 5.428 009372 CC 18 23 41 CT 3 0 3 TT 1 0 1 2.296 0.000 5.985 009381 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 009407 CC 20 23 43 CT 2 0 2 TT 0 0 0 0.050 0.000 0.023 009618 GG 22 20 42 GT 2 0 2 TT 0 0 0 0.045 0.000 0.024 010489 CC 18 21 39 CT 3 0 3 TT 1 0 1 2.296 0.000 5.665 010589 AA 0 0 0 AG 1 0 1 GG 21 21 42 0.012 0.000 0.006 010817 CC 22 23 45 CG 2 0 2 GG 0 0 0 0.045 0.000 0.022 011003 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 011103 CC 20 23 43 CT 3 0 3 TT 1 0 1 2.617 0.000 6.306 011629 AA 7 3 10 AG 10 12 22 GG 4 6 10 0.016 0.583 0.095 011991 AA 0 0 0 AG 5 0 5 GG 16 22 38 0.383 0.000 0.164 012008 CC 18 21 39 CT 3 1 4 TT 0 0 0 0.124 0.012 0.102 012846 AA 3 5 8 AG 15 12 27 GG 6 1 7 1.748 2.918 3.446 012847 AA 6 1 7 AT 15 11 26 TT 3 5 8 1.748 2.327 2.968 012920 CC 3 1 4 CT 10 10 20 TT 10 6 16 0.040 1.409 0.391 012921 GG 16 17 33 GT 5 0 5 TT 2 0 2 2.200 0.000 5.596 013004 AA 0 0 0 AG 5 0 5 GG 17 17 34 0.362 0.000 0.183 013045 AA 0 0 0 AT 3 1 4 TT 19 17 36 0.118 0.015 0.111 013222 AA 0 0 0 AC 0 1 1 CC 23 17 40 0.000 0.015 0.006 013351 CC 0 0 0 CT 1 0 1 TT 22 23 45 0.011 0.000 0.006 013463 AA 16 21 37 AG 6 2 8 GG 1 0 1 0.195 0.048 0.483 013469 CC 22 22 44 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 013573 AA 0 1 1 AG 2 11 13 GG 22 11 33 0.045 0.741 0.046 013699 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 013919 CC 18 22 40 CT 5 0 5 TT 1 0 1 0.644 0.000 2.368 014045 AA 1 0 1 AG 5 0 5 GG 11 19 30 0.172 0.000 1.569 014235 CC 0 0 0 CT 1 0 1 TT 17 19 36 0.015 0.000 0.007 014331 AA 0 0 0 AG 1 1 2 GG 17 18 35 0.015 0.014 0.029 014443 AA 2 0 2 AG 1 2 3 GG 16 17 33 11.256 0.059 10.592 014459 CC 18 19 37 CT 1 0 1 TT 0 0 0 0.014 0.000 0.007 014465 CC 0 0 0 CG 1 2 3 GG 18 17 35 0.014 0.059 0.064 014466 AA 0 1 1 AG 2 8 10 GG 17 10 27 0.059 0.140 0.004 014526 AA 0 0 0 AG 2 1 3 GG 17 18 35 0.059 0.014 0.064 014976 CC 22 20 42 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 015058 CC 2 0 2 CT 4 1 5 TT 16 20 36 3.327 0.012 6.193 015121 AA 22 22 44 AG 0 1 1 GG 0 0 0 0.000 0.011 0.006 015127 CC 23 22 45 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 015158 CC 4 2 6 CT 16 11 27 TT 4 10 14 2.667 0.179 1.578 015586 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 015627 CC 4 2 6 CT 11 11 22 TT 9 10 19 0.042 0.179 0.009 015688 AA 22 23 45 AT 1 0 1 TT 0 0 0 0.011 0.000 0.006 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 002066: G 002766: CGG 008355: GTGTCTGC