Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000546 00000 ------------ A 0.79 0.57 0.68 G 0.21 0.43 0.32 0000 --- --- --- --- 000764 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000839 00000 ------------ A 0.65 0.54 0.59 G 0.35 0.46 0.41 0000 --- --- --- --- 002202 00204 5' UTR G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 002272 00274 5' UTR C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 002546 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002870 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 003375 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 003385 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003475 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003476 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004271 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 004393 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004423 00000 ------------ T 0.57 0.56 0.57 G 0.43 0.44 0.43 0000 --- --- --- --- 005301 00000 ------------ G 0.77 0.63 0.70 A 0.23 0.37 0.30 0000 --- --- --- --- 005596 00000 ------------ C 0.74 0.84 0.78 T 0.26 0.16 0.22 0000 --- --- --- --- 005710 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005980 00000 ------------ T 0.74 0.61 0.68 C 0.26 0.39 0.32 0000 --- --- --- --- 006275 00000 ------------ A 1.00 0.94 0.97 G 0.00 0.06 0.03 0000 --- --- --- --- 006983 00534 NON-SYN T 0.98 1.00 0.99 A 0.02 0.00 0.01 0055 CTG CAG LEU(L) GLN(Q) 007285 00000 ------------ - 0.31 0.42 0.36 + 0.69 0.58 0.64 0000 --- --- --- --- 007529 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007719 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007770 00000 ------------ - 0.10 0.00 0.06 + 0.90 1.00 0.94 0000 --- --- --- --- 008165 00000 ------------ C 0.70 0.60 0.65 T 0.30 0.40 0.35 0000 --- --- --- --- 008239 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008315 00000 ------------ C 0.77 0.88 0.83 T 0.23 0.12 0.17 0000 --- --- --- --- 008374 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008590 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 008885 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009141 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009580 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009654 00000 ------------ G 0.67 0.57 0.62 A 0.33 0.43 0.38 0000 --- --- --- --- 009700 00000 ------------ G 0.74 0.89 0.82 A 0.26 0.11 0.18 0000 --- --- --- --- 009744 00000 ------------ C 0.74 0.89 0.82 T 0.26 0.11 0.18 0000 --- --- --- --- 010055 00000 ------------ C 0.73 0.89 0.81 T 0.27 0.11 0.19 0000 --- --- --- --- 010959 00000 ------------ T 0.68 0.88 0.78 C 0.33 0.12 0.22 0000 --- --- --- --- 011101 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 011255 00000 ------------ - 0.34 0.20 0.27 + 0.66 0.80 0.73 0000 --- --- --- --- 011401 00000 ------------ G 0.70 0.89 0.80 A 0.30 0.11 0.20 0000 --- --- --- --- 011587 00000 ------------ G 0.65 0.55 0.60 A 0.35 0.45 0.40 0000 --- --- --- --- 011773 00000 ------------ A 0.59 0.55 0.57 G 0.41 0.45 0.43 0000 --- --- --- --- 012502 00000 ------------ C 0.54 0.53 0.53 T 0.46 0.47 0.47 0000 --- --- --- --- 012577 00000 ------------ G 0.54 0.53 0.53 A 0.46 0.47 0.47 0000 --- --- --- --- 012850 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 012879 00000 ------------ A 0.73 0.88 0.80 G 0.27 0.12 0.20 0000 --- --- --- --- 012997 00000 ------------ C 0.86 0.55 0.71 A 0.14 0.45 0.29 0000 --- --- --- --- 013019 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 013028 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013527 00000 ------------ G 0.75 0.88 0.82 A 0.25 0.12 0.18 0000 --- --- --- --- 013552 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 013904 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015297 00000 ------------ T 0.70 0.55 0.62 C 0.30 0.45 0.38 0000 --- --- --- --- 015626 00000 ------------ T 0.88 0.89 0.88 C 0.12 0.11 0.12 0000 --- --- --- --- 016557 00000 ------------ G 0.76 0.57 0.68 T 0.24 0.43 0.32 0000 --- --- --- --- 016818 00000 ------------ G 0.60 0.57 0.58 A 0.40 0.43 0.42 0000 --- --- --- --- 017575 00000 ------------ C 0.57 0.56 0.56 G 0.43 0.44 0.44 0000 --- --- --- --- 017607 00000 ------------ G 0.74 0.92 0.82 A 0.26 0.08 0.18 0000 --- --- --- --- 017888 00000 ------------ T 0.58 0.55 0.57 C 0.42 0.45 0.43 0000 --- --- --- --- 018135 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 018167 00000 ------------ - 0.58 0.57 0.57 + 0.42 0.43 0.43 0000 --- --- --- --- 018173 00000 ------------ C 0.58 0.57 0.58 T 0.42 0.42 0.42 0000 --- --- --- --- 018213 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 018256 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 018297 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 018344 00000 ------------ G 0.59 0.57 0.58 C 0.41 0.43 0.42 0000 --- --- --- --- 018647 00000 ------------ C 0.56 0.57 0.56 G 0.44 0.43 0.44 0000 --- --- --- --- 018765 00000 ------------ A 0.58 0.57 0.57 G 0.42 0.43 0.43 0000 --- --- --- --- 019437 00000 ------------ A 0.56 0.58 0.57 G 0.44 0.42 0.43 0000 --- --- --- --- 019443 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 019447 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019670 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019695 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019767 00000 ------------ A 0.56 0.58 0.57 G 0.44 0.42 0.43 0000 --- --- --- --- 019782 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019819 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020413 00000 ------------ G 0.54 0.57 0.56 C 0.46 0.43 0.44 0000 --- --- --- --- 020444 00000 ------------ - 0.09 0.34 0.21 + 0.91 0.66 0.79 0000 --- --- --- --- 020597 00000 ------------ A 0.52 0.57 0.55 T 0.48 0.43 0.45 0000 --- --- --- --- 020612 00000 ------------ A 0.52 0.57 0.55 G 0.48 0.43 0.45 0000 --- --- --- --- 021293 00000 ------------ A 0.57 0.55 0.56 G 0.43 0.45 0.44 0000 --- --- --- --- 021492 00000 ------------ T 0.57 0.55 0.56 C 0.43 0.45 0.44 0000 --- --- --- --- 021734 00000 ------------ C 0.56 0.57 0.57 T 0.44 0.43 0.43 0000 --- --- --- --- 021775 00000 ------------ G 0.56 0.57 0.57 C 0.44 0.43 0.43 0000 --- --- --- --- 021932 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022058 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 022095 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022148 00000 ------------ T 0.56 0.55 0.56 G 0.44 0.45 0.44 0000 --- --- --- --- 022419 00000 ------------ C 0.56 0.57 0.56 T 0.44 0.43 0.44 0000 --- --- --- --- 022428 00000 ------------ - 0.56 0.57 0.56 + 0.44 0.43 0.44 0000 --- --- --- --- 022552 00000 ------------ A 0.56 0.57 0.56 G 0.44 0.43 0.44 0000 --- --- --- --- 022743 00790 SYNON C 0.73 0.89 0.81 T 0.27 0.11 0.19 0140 TCC TCT SER(S) SER(S) 022746 00793 SYNON A 0.94 0.98 0.96 G 0.06 0.02 0.04 0141 CTA CTG LEU(L) LEU(L) 022860 00907 SYNON T 0.56 0.57 0.56 A 0.44 0.43 0.44 0179 CCT CCA PRO(P) PRO(P) 022867 00000 ------------ A 0.56 0.57 0.56 G 0.44 0.43 0.44 0000 --- --- --- --- 022868 00000 ------------ A 0.56 0.57 0.56 G 0.44 0.43 0.44 0000 --- --- --- --- 023128 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 023508 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 023618 00000 ------------ C 0.59 0.55 0.57 T 0.41 0.45 0.43 0000 --- --- --- --- 023735 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 023875 00000 ------------ A 0.57 0.55 0.56 G 0.43 0.45 0.44 0000 --- --- --- --- 023951 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 023994 00000 ------------ G 0.78 0.57 0.69 A 0.22 0.42 0.31 0000 --- --- --- --- 024093 00000 ------------ G 0.57 0.55 0.56 C 0.43 0.45 0.44 0000 --- --- --- --- 024436 00000 ------------ T 1.00 0.90 0.95 C 0.00 0.10 0.05 0000 --- --- --- --- 024507 00000 ------------ A 0.57 0.57 0.57 C 0.43 0.43 0.43 0000 --- --- --- --- 024549 00000 ------------ G 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 024562 00000 ------------ A 0.57 0.57 0.57 G 0.43 0.43 0.43 0000 --- --- --- --- 024636 00000 ------------ G 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 024655 00000 ------------ T 0.57 0.57 0.57 C 0.43 0.43 0.43 0000 --- --- --- --- 025155 00000 ------------ T 0.58 0.57 0.57 C 0.42 0.43 0.43 0000 --- --- --- --- 025192 00000 ------------ A 0.67 0.54 0.61 G 0.33 0.46 0.39 0000 --- --- --- --- 025301 00000 ------------ G 0.59 0.57 0.58 A 0.41 0.43 0.42 0000 --- --- --- --- 025656 00000 ------------ G 0.61 0.57 0.58 C 0.39 0.43 0.42 0000 --- --- --- --- 025711 00000 ------------ T 0.60 0.57 0.58 C 0.40 0.43 0.42 0000 --- --- --- --- 025737 00000 ------------ C 0.76 0.89 0.83 T 0.24 0.11 0.17 0000 --- --- --- --- 026031 00000 ------------ A 0.52 0.57 0.54 G 0.48 0.43 0.46 0000 --- --- --- --- 026201 00000 ------------ A 0.57 0.57 0.57 T 0.43 0.43 0.43 0000 --- --- --- --- 027421 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 028130 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 028351 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 028572 01399 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0343 AAT AAC ASN(N) ASN(N) 029446 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 029492 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029640 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029878 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030501 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 031051 00000 ------------ A 0.93 0.98 0.96 G 0.07 0.02 0.04 0000 --- --- --- --- 031548 00000 ------------ A 0.91 0.61 0.78 T 0.09 0.39 0.22 0000 --- --- --- --- 032278 01529 NON-SYN G 0.92 0.66 0.79 C 0.08 0.34 0.21 0387 GCG CCG ALA(A) PRO(P) 032419 00000 ------------ - 0.27 0.14 0.21 + 0.73 0.86 0.79 0000 --- --- --- --- 033525 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033563 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 034286 00000 ------------ G 0.73 0.62 0.68 A 0.27 0.38 0.32 0000 --- --- --- --- 034873 01629 NON-SYN C 1.00 0.97 0.99 T 0.00 0.03 0.01 0420 GCG GTG ALA(A) VAL(V) 034946 01702 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0444 GGG GGA GLY(G) GLY(G) 035332 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035413 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 036022 00000 ------------ A 0.73 0.54 0.64 G 0.27 0.46 0.36 0000 --- --- --- --- 036098 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036396 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 036839 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036884 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 036958 00000 ------------ - 0.35 0.41 0.38 + 0.65 0.59 0.62 0000 --- --- --- --- 037094 00000 ------------ T 0.67 0.63 0.65 C 0.33 0.37 0.35 0000 --- --- --- --- 037263 00000 ------------ T 0.74 0.50 0.62 G 0.26 0.50 0.38 0000 --- --- --- --- 037646 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 038629 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 038710 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 039068 00000 ------------ - 0.35 0.20 0.28 + 0.65 0.80 0.72 0000 --- --- --- --- 039406 00000 ------------ A 0.69 0.93 0.81 G 0.31 0.07 0.19 0000 --- --- --- --- 040893 00000 ------------ C 0.98 0.94 0.96 A 0.02 0.06 0.04 0000 --- --- --- --- 041262 00000 ------------ G 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- 041359 00000 ------------ T 0.71 0.53 0.62 C 0.29 0.47 0.38 0000 --- --- --- --- 041881 00000 ------------ A 0.67 0.91 0.79 G 0.33 0.09 0.21 0000 --- --- --- --- 042248 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 043736 02306 NON-SYN G 0.95 1.00 0.97 A 0.05 0.00 0.03 0646 GTC ATC VAL(V) ILE(I) 044818 00000 ------------ C 0.60 0.80 0.70 T 0.40 0.20 0.30 0000 --- --- --- --- 044827 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 045306 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 045322 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 045394 00000 ------------ C 0.96 0.93 0.94 T 0.04 0.07 0.06 0000 --- --- --- --- 045623 00000 ------------ - 0.38 0.20 0.29 + 0.62 0.80 0.71 0000 --- --- --- --- 046590 00000 ------------ T 0.93 0.72 0.84 C 0.07 0.28 0.16 0000 --- --- --- --- 046739 00000 ------------ G 0.62 0.79 0.70 C 0.38 0.21 0.30 0000 --- --- --- --- 047245 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 047246 00000 ------------ G 0.93 0.77 0.85 A 0.07 0.23 0.15 0000 --- --- --- --- 047351 00000 ------------ - 0.68 0.57 0.62 + 0.32 0.43 0.38 0000 --- --- --- --- 047529 00000 ------------ A 0.69 0.93 0.81 T 0.31 0.07 0.19 0000 --- --- --- --- 047574 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 047582 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 048264 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 049085 00000 ------------ G 0.63 0.53 0.58 C 0.37 0.47 0.42 0000 --- --- --- --- 049804 00000 ------------ - 0.28 0.07 0.18 + 0.72 0.93 0.82 0000 --- --- --- --- 050411 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 050526 00000 ------------ T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 050553 00000 ------------ C 0.65 0.93 0.79 A 0.35 0.07 0.21 0000 --- --- --- --- 050663 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 051066 00000 ------------ G 0.64 0.59 0.61 T 0.36 0.41 0.39 0000 --- --- --- --- 051132 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 051274 00000 ------------ G 0.73 0.57 0.64 A 0.27 0.43 0.36 0000 --- --- --- --- 051300 00000 ------------ G 0.70 0.57 0.63 A 0.30 0.43 0.37 0000 --- --- --- --- 051323 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 051359 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 051374 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 051400 00000 ------------ - 0.39 0.07 0.21 + 0.61 0.93 0.79 0000 --- --- --- --- 051444 00000 ------------ T 0.40 0.97 0.73 C 0.60 0.03 0.27 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007285: G 007770: TC 011255: A 013552: T 013904: C 018167: AATAA 020444: G 022428: A 027421: ATCT 032419: ATATA 036958: T 039068: AAG 045623: T 047351: GCA 049804: GCGTCCTGGGCGGG 050663: GAAT 051400: AGG