Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000632 CC 16 22 38 CT 1 0 1 TT 0 0 0 0.016 0.000 0.007 000990 CC 22 15 37 CT 1 0 1 TT 0 0 0 0.011 0.000 0.007 001001 CC 0 0 0 CG 1 0 1 GG 22 15 37 0.011 0.000 0.007 001041 CC 3 0 3 CT 11 0 11 TT 8 15 23 0.065 0.000 0.947 001169 AA 16 10 26 AC 5 5 10 CC 1 0 1 0.499 0.600 0.001 001401 CC 24 18 42 CT 0 1 1 TT 0 0 0 0.000 0.014 0.006 001640 GG 21 16 37 GT 2 1 3 TT 0 0 0 0.048 0.016 0.061 001643 AA 3 0 3 AG 6 0 6 GG 15 18 33 2.667 0.000 7.292 001645 GG 23 18 41 GT 1 0 1 TT 0 0 0 0.011 0.000 0.006 002425 AA 0 0 0 AG 1 0 1 GG 20 20 40 0.012 0.000 0.006 002524 AA 0 0 0 AC 4 0 4 CC 20 23 43 0.198 0.000 0.093 002923 AA 16 11 27 AG 7 12 19 GG 0 0 0 0.741 2.865 3.116 003005 CC 21 23 44 CG 2 0 2 GG 0 0 0 0.048 0.000 0.023 003043 GG 23 22 45 GT 0 1 1 TT 0 0 0 0.000 0.011 0.006 003221 AA 0 0 0 AG 9 12 21 GG 14 10 24 1.361 3.094 4.168 003437 AA 20 23 43 AC 3 0 3 CC 1 0 1 2.617 0.000 6.306 003942 CC 0 0 0 CT 3 2 5 TT 20 20 40 0.112 0.050 0.156 004111 CC 8 0 8 CT 6 12 18 TT 8 9 17 4.545 3.360 0.666 004141 CC 21 18 39 CT 0 2 2 TT 0 0 0 0.000 0.055 0.026 004850 AA 0 0 0 AG 1 0 1 GG 23 15 38 0.011 0.000 0.007 005328 AA 0 0 0 AG 0 1 1 GG 23 15 38 0.000 0.017 0.007 005586 CC 23 22 45 CG 0 1 1 GG 0 0 0 0.000 0.011 0.006 005979 -- 6 0 6 +- 8 11 19 ++ 9 12 21 1.965 2.272 0.263 006132 AA 8 10 18 AT 7 12 19 TT 9 1 10 4.146 1.239 1.317 006228 AA 8 1 9 AG 7 12 19 GG 9 10 19 4.146 1.239 1.102 006929 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 006941 CC 23 23 46 CG 1 0 1 GG 0 0 0 0.011 0.000 0.005 007029 CC 9 12 21 CT 9 11 20 TT 6 0 6 1.361 2.272 0.129 007416 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 007446 AA 0 0 0 AG 1 3 4 GG 23 20 43 0.011 0.112 0.093 007703 CC 5 0 5 CG 5 9 14 GG 11 7 18 4.868 2.450 0.691 007799 CC 19 16 35 CT 2 0 2 TT 0 0 0 0.053 0.000 0.029 008062 AA 11 7 18 AG 5 9 14 GG 5 0 5 4.868 2.450 0.691 008351 CC 4 0 4 CG 6 11 17 GG 13 12 25 3.390 2.272 0.202 008542 AA 0 0 0 AG 0 3 3 GG 23 20 43 0.000 0.112 0.052 008572 AA 22 23 45 AG 2 0 2 GG 0 0 0 0.045 0.000 0.022 008682 CC 5 0 5 CG 6 11 17 GG 13 12 25 4.594 2.272 0.639 009082 AA 0 0 0 AG 1 0 1 GG 19 22 41 0.013 0.000 0.006 009088 AA 18 22 40 AG 2 0 2 GG 0 0 0 0.055 0.000 0.025 009829 CC 19 23 42 CT 1 0 1 TT 0 0 0 0.013 0.000 0.006 009933 CC 0 0 0 CT 2 0 2 TT 14 23 37 0.071 0.000 0.027 010441 AA 0 0 0 AC 1 0 1 CC 23 23 46 0.011 0.000 0.005 010568 AA 7 1 8 AG 6 11 17 GG 11 10 21 5.662 0.889 1.780 010613 AA 0 0 0 AG 1 0 1 GG 23 22 45 0.011 0.000 0.006 010657 CC 5 0 5 CT 6 10 16 TT 13 12 25 4.594 1.903 0.930 011066 CC 13 12 25 CG 8 10 18 GG 3 0 3 0.897 1.903 0.010 011258 AA 14 12 26 AG 8 10 18 GG 2 0 2 0.296 1.903 0.261 011271 AA 0 0 0 AG 0 1 1 GG 24 21 45 0.000 0.012 0.006 011751 CC 24 15 39 CG 0 1 1 GG 0 0 0 0.000 0.017 0.006 011791 AA 23 16 39 AC 1 0 1 CC 0 0 0 0.011 0.000 0.006 012337 CC 17 23 40 CT 1 0 1 TT 0 0 0 0.015 0.000 0.006 012543 AA 17 22 39 AG 4 0 4 GG 0 0 0 0.233 0.000 0.102 012728 CC 0 0 0 CG 2 1 3 GG 20 21 41 0.050 0.012 0.055 012749 AA 0 0 0 AG 0 1 1 GG 22 21 43 0.000 0.012 0.006 012810 AA 21 20 41 AC 1 0 1 CC 0 0 0 0.012 0.000 0.006 013132 AA 0 0 0 AT 1 0 1 TT 18 19 37 0.014 0.000 0.007 014031 CC 22 22 44 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 014316 AA 22 22 44 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 014912 CC 12 16 28 CG 3 1 4 GG 0 0 0 0.185 0.016 0.142 015067 GG 0 0 0 GT 8 3 11 TT 16 20 36 0.960 0.112 0.826 015102 AA 0 0 0 AT 1 0 1 TT 23 23 46 0.011 0.000 0.005 015490 AA 0 0 0 AC 0 1 1 CC 24 22 46 0.000 0.011 0.005 015560 AA 4 0 4 AG 5 11 16 GG 4 10 14 0.692 2.644 0.031 015578 -- 1 0 1 +- 11 3 14 ++ 12 20 32 0.618 0.112 0.140 015904 AA 19 20 39 AG 5 0 5 GG 0 0 0 0.324 0.000 0.160 016022 AA 1 0 1 AG 7 9 16 GG 16 11 27 0.044 1.686 0.607 016058 AA 0 0 0 AT 0 2 2 TT 24 18 42 0.000 0.055 0.024 016143 CC 23 20 43 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 016163 AA 11 16 27 AT 12 4 16 TT 1 0 1 1.059 0.247 0.607 016703 AA 10 17 27 AG 11 3 14 GG 0 0 0 2.644 0.131 1.738 017152 CC 0 0 0 CG 9 2 11 GG 15 16 31 1.278 0.062 0.954 017188 AA 11 16 27 AG 13 2 15 GG 0 0 0 3.311 0.062 1.985 017828 CC 0 0 0 CT 13 2 15 TT 10 14 24 3.569 0.071 2.211 018141 AA 8 7 15 AG 12 9 21 GG 3 1 4 0.209 0.746 0.739 018225 AA 0 0 0 AG 2 1 3 GG 21 16 37 0.048 0.016 0.061 018327 GG 0 0 0 GT 1 9 10 TT 21 8 29 0.012 2.203 0.843 018367 AA 21 17 38 AG 2 0 2 GG 0 0 0 0.048 0.000 0.026 018566 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 018571 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 018660 CC 11 12 23 CG 11 10 21 GG 1 0 1 0.741 1.903 2.308 018905 CC 0 0 0 CT 0 1 1 TT 24 21 45 0.000 0.012 0.006 019557 GG 23 21 44 GT 1 1 2 TT 0 0 0 0.011 0.012 0.023 019631 CC 0 0 0 CT 2 0 2 TT 22 23 45 0.045 0.000 0.022 019916 AA 0 1 1 AT 10 11 21 TT 12 11 23 1.903 0.741 2.308 020677 AA 0 0 0 AG 2 0 2 GG 19 18 37 0.053 0.000 0.027 020807 AA 20 19 39 AT 2 0 2 TT 0 0 0 0.050 0.000 0.026 020973 AA 21 11 32 AG 3 11 14 GG 0 1 1 0.107 0.741 0.140 021862 AA 0 0 0 AG 2 0 2 GG 20 20 40 0.050 0.000 0.025 022049 CC 16 20 36 CG 6 0 6 GG 0 0 0 0.548 0.000 0.249 022175 AA 0 0 0 AG 1 0 1 GG 22 20 42 0.011 0.000 0.006 022421 CC 16 23 39 CT 2 0 2 TT 0 0 0 0.062 0.000 0.026 022832 AA 14 23 37 AG 4 0 4 GG 1 0 1 0.825 0.000 3.341 022848 AA 0 0 0 AG 1 0 1 GG 18 23 41 0.014 0.000 0.006 022986 AA 0 0 0 AG 1 0 1 GG 17 23 40 0.015 0.000 0.006 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 005979: AATTTT 015578: g