Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000164 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000241 00000 ------------ G 1.00 0.70 0.85 A 0.00 0.30 0.15 0000 --- --- --- --- 000250 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000257 00000 ------------ G 0.98 0.70 0.84 A 0.02 0.30 0.16 0000 --- --- --- --- 000264 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000269 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000404 00000 ------------ G 0.98 0.48 0.73 T 0.02 0.52 0.27 0000 --- --- --- --- 000440 00000 ------------ A 0.83 0.43 0.64 C 0.17 0.57 0.36 0000 --- --- --- --- 000648 00000 ------------ C 0.96 0.50 0.74 G 0.04 0.50 0.26 0000 --- --- --- --- 000656 00000 ------------ A 0.81 0.91 0.86 T 0.19 0.09 0.14 0000 --- --- --- --- 000666 00000 ------------ C 0.44 0.84 0.63 T 0.56 0.16 0.37 0000 --- --- --- --- 000740 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001747 00000 ------------ C 0.58 0.89 0.73 G 0.42 0.11 0.27 0000 --- --- --- --- 001997 00024 5' UTR G 0.69 0.91 0.80 A 0.31 0.09 0.20 0000 --- --- --- --- 002197 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 002418 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 002598 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 003025 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 003461 00000 ------------ C 0.72 1.00 0.90 A 0.28 0.00 0.10 0000 --- --- --- --- 003600 00000 ------------ G 0.89 0.40 0.58 A 0.11 0.60 0.42 0000 --- --- --- --- 004322 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004496 00000 ------------ A 0.91 0.32 0.59 G 0.09 0.68 0.41 0000 --- --- --- --- 004608 00000 ------------ G 0.93 0.35 0.65 A 0.07 0.65 0.35 0000 --- --- --- --- 004706 00000 ------------ G 0.90 0.97 0.94 A 0.10 0.03 0.06 0000 --- --- --- --- 004714 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 004887 00000 ------------ T 0.93 0.35 0.62 C 0.07 0.65 0.38 0000 --- --- --- --- 005061 00000 ------------ C 0.93 0.35 0.62 T 0.07 0.65 0.38 0000 --- --- --- --- 005153 00000 ------------ C 0.93 0.34 0.63 A 0.07 0.66 0.37 0000 --- --- --- --- 005270 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 005367 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005368 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005373 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 005858 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 005898 00000 ------------ T 0.70 0.91 0.81 C 0.30 0.09 0.19 0000 --- --- --- --- 006003 00000 ------------ C 0.93 0.34 0.64 T 0.07 0.66 0.36 0000 --- --- --- --- 006013 00000 ------------ G 0.93 0.34 0.64 T 0.07 0.66 0.36 0000 --- --- --- --- 006045 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006130 00000 ------------ A 0.93 0.33 0.65 G 0.07 0.67 0.35 0000 --- --- --- --- 006191 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 006269 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 006317 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006460 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006527 00000 ------------ T 0.87 1.00 0.92 C 0.13 0.00 0.08 0000 --- --- --- --- 006543 00000 ------------ T 0.87 1.00 0.92 C 0.13 0.00 0.08 0000 --- --- --- --- 006625 00000 ------------ A 0.93 0.34 0.69 T 0.07 0.66 0.31 0000 --- --- --- --- 006704 00000 ------------ C 0.94 0.34 0.70 G 0.06 0.66 0.30 0000 --- --- --- --- 006770 00000 ------------ C 0.94 0.34 0.70 T 0.06 0.66 0.30 0000 --- --- --- --- 006840 00000 ------------ G 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 006950 00000 ------------ G 0.94 0.34 0.70 T 0.06 0.66 0.30 0000 --- --- --- --- 006953 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007160 00000 ------------ C 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 007170 00000 ------------ C 0.94 0.34 0.70 G 0.06 0.66 0.30 0000 --- --- --- --- 007518 00000 ------------ G 0.94 0.35 0.65 A 0.06 0.65 0.35 0000 --- --- --- --- 007624 00000 ------------ T 0.94 0.35 0.65 C 0.06 0.65 0.35 0000 --- --- --- --- 007726 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 007989 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 007995 00000 ------------ A 0.73 0.91 0.82 G 0.27 0.09 0.18 0000 --- --- --- --- 008002 00000 ------------ A 0.93 0.35 0.64 G 0.07 0.65 0.36 0000 --- --- --- --- 008230 00295 NON-SYN G 0.72 0.91 0.82 A 0.28 0.09 0.18 0044 GAA AAA GLU(E) LYS(K) 008660 00000 ------------ G 0.86 0.34 0.60 C 0.14 0.66 0.40 0000 --- --- --- --- 008666 00000 ------------ G 0.98 0.75 0.86 A 0.02 0.25 0.14 0000 --- --- --- --- 008946 00468 SYNON G 0.91 1.00 0.96 A 0.09 0.00 0.04 0101 GTG GTA VAL(V) VAL(V) 009195 00000 ------------ C 0.92 0.35 0.64 G 0.08 0.65 0.36 0000 --- --- --- --- 009200 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009214 00000 ------------ C 0.92 0.35 0.64 T 0.08 0.65 0.36 0000 --- --- --- --- 009298 00000 ------------ A 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 009365 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009381 00000 ------------ A 0.92 0.36 0.65 G 0.08 0.64 0.35 0000 --- --- --- --- 009511 00000 ------------ T 0.92 0.35 0.64 C 0.08 0.65 0.36 0000 --- --- --- --- 009735 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009757 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009935 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 010029 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 010183 00000 ------------ G 0.91 0.34 0.63 A 0.09 0.66 0.37 0000 --- --- --- --- 010275 00000 ------------ A 0.91 0.34 0.63 G 0.09 0.66 0.37 0000 --- --- --- --- 010418 00000 ------------ - 0.08 0.64 0.35 + 0.92 0.36 0.65 0000 --- --- --- --- 010605 00000 ------------ A 0.92 0.33 0.67 G 0.08 0.67 0.33 0000 --- --- --- --- 010637 00000 ------------ C 0.92 0.34 0.66 T 0.08 0.66 0.34 0000 --- --- --- --- 010681 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 010861 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010943 00000 ------------ C 0.92 0.36 0.66 G 0.08 0.64 0.34 0000 --- --- --- --- 011124 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 011182 00000 ------------ C 0.92 0.35 0.64 T 0.08 0.65 0.36 0000 --- --- --- --- 011915 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 011922 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 012842 00000 ------------ T 0.91 0.38 0.65 C 0.09 0.62 0.35 0000 --- --- --- --- 013266 00000 ------------ A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 013406 00000 ------------ A 0.79 0.33 0.58 C 0.21 0.67 0.42 0000 --- --- --- --- 013507 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013634 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013873 00000 ------------ G 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 013925 00000 ------------ T 0.86 0.36 0.61 C 0.14 0.64 0.39 0000 --- --- --- --- 014085 00000 ------------ T 0.98 0.72 0.84 C 0.02 0.28 0.16 0000 --- --- --- --- 014353 00753 SYNON G 0.64 0.74 0.69 A 0.36 0.26 0.31 0196 CCG CCA PRO(P) PRO(P) 014714 00000 ------------ - 0.88 0.35 0.62 + 0.12 0.65 0.38 0000 --- --- --- --- 014716 00000 ------------ G 0.50 0.91 0.70 T 0.50 0.09 0.30 0000 --- --- --- --- 014787 00000 ------------ C 0.65 0.74 0.69 T 0.35 0.26 0.31 0000 --- --- --- --- 014826 00000 ------------ T 0.48 0.91 0.69 C 0.52 0.09 0.31 0000 --- --- --- --- 015038 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 015043 00000 ------------ G 0.48 0.91 0.69 A 0.52 0.09 0.31 0000 --- --- --- --- 015070 00000 ------------ G 0.98 0.76 0.87 A 0.02 0.24 0.13 0000 --- --- --- --- 015073 00000 ------------ A 0.65 0.74 0.69 G 0.35 0.26 0.31 0000 --- --- --- --- 015103 00000 ------------ C 0.65 0.74 0.69 T 0.35 0.26 0.31 0000 --- --- --- --- 015349 00000 ------------ T 0.65 0.74 0.69 C 0.35 0.26 0.31 0000 --- --- --- --- 015353 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 015368 00000 ------------ T 0.65 0.74 0.69 C 0.35 0.26 0.31 0000 --- --- --- --- 015585 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015687 00000 ------------ C 0.88 0.34 0.62 G 0.12 0.66 0.38 0000 --- --- --- --- 015706 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015720 00000 ------------ C 0.73 0.91 0.82 T 0.27 0.09 0.18 0000 --- --- --- --- 015722 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015796 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015797 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015798 00000 ------------ A 0.79 0.34 0.58 G 0.21 0.66 0.42 0000 --- --- --- --- 016006 00000 ------------ T 0.67 0.34 0.51 C 0.33 0.66 0.49 0000 --- --- --- --- 016053 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016076 00000 ------------ A 0.79 0.34 0.58 G 0.21 0.66 0.42 0000 --- --- --- --- 016391 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016465 00000 ------------ T 0.88 0.35 0.62 C 0.12 0.65 0.38 0000 --- --- --- --- 016515 00000 ------------ T 0.42 0.67 0.54 A 0.58 0.33 0.46 0000 --- --- --- --- 016554 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 016567 00000 ------------ G 0.88 0.35 0.62 A 0.12 0.65 0.38 0000 --- --- --- --- 016881 00000 ------------ T 0.42 0.66 0.53 C 0.58 0.34 0.47 0000 --- --- --- --- 017078 00958 SYNON T 1.00 0.97 0.99 C 0.00 0.03 0.01 0265 TTG CTG LEU(L) LEU(L) 017095 00975 SYNON G 1.00 0.95 0.98 A 0.00 0.05 0.02 0270 GCG GCA ALA(A) ALA(A) 017180 00000 ------------ T 0.91 0.97 0.94 C 0.09 0.03 0.06 0000 --- --- --- --- 017340 01003 NON-SYN G 0.86 0.35 0.62 A 0.14 0.65 0.38 0280 GAC AAC ASP(D) ASN(N) 017599 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 017810 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018096 00000 ------------ T 0.92 0.93 0.92 G 0.08 0.07 0.08 0000 --- --- --- --- 018425 00000 ------------ A 0.66 0.36 0.51 G 0.34 0.64 0.49 0000 --- --- --- --- 018508 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 018535 00000 ------------ G 0.98 0.71 0.85 C 0.02 0.29 0.15 0000 --- --- --- --- 018710 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 018849 00000 ------------ A 0.82 0.36 0.59 G 0.18 0.64 0.41 0000 --- --- --- --- 019090 00000 ------------ A 0.82 0.36 0.59 G 0.18 0.64 0.41 0000 --- --- --- --- 019233 00000 ------------ A 0.84 0.36 0.60 G 0.16 0.64 0.40 0000 --- --- --- --- 019238 00000 ------------ T 0.84 0.36 0.60 C 0.16 0.64 0.40 0000 --- --- --- --- 019582 00000 ------------ G 0.67 0.36 0.52 C 0.33 0.64 0.48 0000 --- --- --- --- 019668 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 019845 00000 ------------ G 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 020231 00000 ------------ C 0.97 0.81 0.88 T 0.03 0.19 0.12 0000 --- --- --- --- 020308 00000 ------------ G 0.97 0.42 0.67 C 0.03 0.58 0.33 0000 --- --- --- --- 020466 00000 ------------ - 0.14 0.00 0.07 + 0.86 1.00 0.93 0000 --- --- --- --- 020530 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 020553 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 020640 00000 ------------ - 0.87 0.95 0.91 + 0.13 0.05 0.09 0000 --- --- --- --- 021449 00000 ------------ A 0.97 0.65 0.80 G 0.03 0.35 0.20 0000 --- --- --- --- 021475 00000 ------------ G 0.83 0.97 0.91 C 0.17 0.03 0.09 0000 --- --- --- --- 021585 00000 ------------ C 0.86 0.97 0.92 T 0.14 0.03 0.08 0000 --- --- --- --- 021728 00000 ------------ T 0.86 0.97 0.92 G 0.14 0.03 0.08 0000 --- --- --- --- 021889 00000 ------------ G 0.85 0.70 0.78 A 0.15 0.30 0.22 0000 --- --- --- --- 022387 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 022420 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022433 00000 ------------ - 0.13 0.00 0.07 + 0.87 1.00 0.93 0000 --- --- --- --- 022512 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022699 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 022986 00000 ------------ A 0.95 0.75 0.85 G 0.05 0.25 0.15 0000 --- --- --- --- 023000 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 023271 00000 ------------ C 0.92 0.98 0.94 T 0.08 0.02 0.06 0000 --- --- --- --- 023422 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 024021 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 024046 00000 ------------ C 0.76 0.91 0.84 T 0.24 0.09 0.16 0000 --- --- --- --- 024141 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024392 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024617 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024913 00000 ------------ C 0.54 0.92 0.71 T 0.46 0.08 0.29 0000 --- --- --- --- 024952 00000 ------------ G 0.75 1.00 0.86 A 0.25 0.00 0.14 0000 --- --- --- --- 025121 00000 ------------ T 0.56 0.74 0.64 C 0.44 0.26 0.36 0000 --- --- --- --- 026122 00000 ------------ G 0.98 0.76 0.87 A 0.02 0.24 0.13 0000 --- --- --- --- 026461 00000 ------------ A 0.41 0.76 0.59 G 0.59 0.24 0.41 0000 --- --- --- --- 026577 00000 ------------ C 0.45 0.71 0.57 G 0.55 0.29 0.43 0000 --- --- --- --- 026794 00000 ------------ G 0.91 1.00 0.94 A 0.09 0.00 0.06 0000 --- --- --- --- 026858 00000 ------------ G 0.91 1.00 0.94 A 0.09 0.00 0.06 0000 --- --- --- --- 026936 00000 ------------ - 0.13 0.46 0.24 + 0.87 0.54 0.76 0000 --- --- --- --- 027025 00000 ------------ A 0.54 0.46 0.51 G 0.46 0.54 0.49 0000 --- --- --- --- 027137 00000 ------------ G 0.98 0.54 0.83 A 0.02 0.46 0.17 0000 --- --- --- --- 027323 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027417 00000 ------------ T 0.88 0.32 0.61 G 0.12 0.68 0.39 0000 --- --- --- --- 027546 00000 ------------ G 0.67 0.91 0.78 A 0.33 0.09 0.22 0000 --- --- --- --- 027668 01260 SYNON T 1.00 0.95 0.98 C 0.00 0.05 0.02 0365 AGT AGC SER(S) SER(S) 028621 02213 3' UTR C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 028723 02315 3' UTR T 0.87 0.33 0.60 A 0.13 0.67 0.40 0000 --- --- --- --- 028859 02451 3' UTR T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 029023 02615 3' UTR T 0.70 0.91 0.80 C 0.30 0.09 0.20 0000 --- --- --- --- 029110 02702 3' UTR T 0.55 0.76 0.66 C 0.45 0.24 0.34 0000 --- --- --- --- 029166 00000 ------------ - 0.43 0.09 0.26 + 0.57 0.91 0.74 0000 --- --- --- --- 029176 00000 ------------ - 0.59 0.74 0.68 + 0.41 0.26 0.32 0000 --- --- --- --- 029561 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 029583 00000 ------------ A 0.98 0.76 0.88 T 0.02 0.24 0.12 0000 --- --- --- --- 029584 00000 ------------ - 0.61 0.90 0.75 + 0.39 0.10 0.25 0000 --- --- --- --- 029868 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002197: CTGGTAGA 006460: ATCTTT 010418: C 011922: TT 014714: TGGGGG 020466: GTT 020553: GCCTCCCGGGTCCCGGTTCAAGCAATTCTTCTGCCTCA 020640: T 022387: AT 022433: T 026936: T 029166: CAAAACAAAA 029176: CAAAA 029584: AATT