Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000207 C 6 6 12 G 40 40 80 000498 T 6 0 6 C 42 46 88 000555 A 5 3 8 C 43 43 86 000760 G 4 3 7 T 44 43 87 000773 C 15 1 16 T 33 45 78 000793 T 0 1 1 C 48 45 93 000859 T 5 1 6 C 41 45 86 001063 T 2 3 5 A 44 41 85 001088 G 0 2 2 A 46 42 88 001457 C 4 1 5 G 36 37 73 001487 - 1 3 4 + 43 41 84 001489 A 1 0 1 T 43 44 87 001583 G 33 10 43 T 11 36 47 001587 T 1 3 4 C 43 43 86 001637 A 5 3 8 G 43 43 86 001775 G 7 6 13 T 41 40 81 001816 G 4 2 6 A 44 42 86 002099 C 1 0 1 G 47 44 91 002339 T 0 1 1 A 48 45 93 002396 T 5 0 5 C 41 44 85 002472 C 2 0 2 G 46 46 92 003039 T 24 6 30 G 24 40 64 003812 G 8 6 14 A 36 36 72 004434 G 1 0 1 A 43 46 89 004439 A 33 9 42 C 11 37 48 004588 - 0 2 2 + 40 44 84 004698 T 4 3 7 C 40 39 79 004794 T 1 0 1 A 47 46 93 004888 C 15 1 16 T 33 45 78 004901 T 1 0 1 C 47 46 93 004988 T 5 3 8 A 41 43 84 005147 C 0 1 1 T 46 45 91 005160 T 5 3 8 C 41 43 84 005428 G 2 3 5 A 46 43 89 005576 T 0 2 2 C 44 42 86 005578 A 5 3 8 G 39 41 80 005873 G 13 1 14 T 33 45 78 005883 T 8 1 9 C 38 45 83 005914 T 9 4 13 C 37 42 79 006198 G 6 3 9 C 42 43 85 006199 A 0 1 1 G 48 45 93 006333 C 2 0 2 A 46 46 92 006527 C 2 3 5 A 46 43 89 006531 - 3 3 6 + 45 43 88 006654 G 6 0 6 A 42 46 88 006813 C 1 0 1 A 39 36 75 007044 A 13 0 13 G 27 40 67 007244 A 1 0 1 G 39 42 81 007276 C 0 6 6 T 40 34 74 007401 G 2 0 2 A 38 42 80 007420 T 2 0 2 C 38 42 80 007421 A 1 0 1 G 39 42 81 007479 A 3 3 6 G 37 39 76 007595 C 1 0 1 T 39 42 81 007644 C 1 0 1 T 39 42 81 007829 C 4 2 6 T 42 40 82 008051 C 0 2 2 T 46 42 88 008072 A 5 1 6 G 41 41 82 008348 A 2 29 31 G 46 15 61 008368 T 7 5 12 C 39 39 78 008588 G 0 2 2 A 48 44 92 008858 G 1 0 1 C 45 46 91 008877 A 33 9 42 G 13 37 50 008979 T 0 2 2 C 48 44 92 009325 G 2 0 2 A 46 46 92 009354 C 5 3 8 T 43 43 86 009516 T 3 3 6 C 45 43 88 009525 C 0 2 2 G 48 44 92 009534 G 8 6 14 A 40 40 80 009673 A 5 3 8 G 43 43 86 009682 C 5 3 8 T 43 43 86 009687 A 3 0 3 G 45 46 91 009972 T 2 3 5 G 46 41 87 010098 T 0 2 2 C 48 42 90 010516 + 5 3 8 - 39 43 82 010751 - 6 0 6 + 40 46 86 010876 C 1 0 1 G 47 46 93 010890 T 5 3 8 C 43 43 86 010989 G 5 3 8 T 41 39 80 010994 A 6 0 6 G 40 40 80 011024 C 1 0 1 G 45 42 87 011064 C 1 2 3 A 45 36 81 011134 G 2 0 2 T 42 40 82 011152 C 2 2 4 A 42 36 78 011226 A 10 31 41 G 32 9 41 011390 G 14 1 15 T 28 43 71 011633 G 36 10 46 A 12 36 48 011659 T 16 1 17 C 32 45 77 011675 T 6 1 7 C 42 45 87 011686 T 1 0 1 G 47 46 93 011710 T 1 0 1 C 47 46 93 011763 G 1 1 2 A 47 41 88 011798 G 6 1 7 A 42 37 79 011825 T 3 1 4 G 45 37 82 011943 G 16 1 17 C 32 43 75 011992 C 6 0 6 T 42 44 86 012036 A 0 2 2 G 48 44 92 012070 T 16 1 17 G 32 45 77 012087 A 1 3 4 T 47 43 90 012117 C 8 4 12 G 40 42 82 012181 A 1 0 1 G 47 46 93 012313 G 1 0 1 T 43 44 87 012364 A 2 0 2 G 46 46 92 012421 G 6 1 7 A 42 43 85 012443 T 1 0 1 C 47 46 93 012454 T 1 0 1 C 47 46 93 012593 T 3 1 4 C 41 37 78 012652 G 1 0 1 A 45 38 83 012732 * 012767 T 1 0 1 C 45 34 79 012773 T 14 1 15 C 32 37 69 012776 G 1 0 1 T 45 36 81 012798 A 9 3 12 G 37 41 78 012833 G 10 1 11 A 36 45 81 012856 A 12 6 18 T 36 40 76 012989 * 013042 C 35 8 43 A 13 38 51 013164 C 0 2 2 G 48 44 92 013181 A 0 2 2 C 48 44 92 013326 G 13 3 16 C 33 43 76 013436 C 26 8 34 T 22 36 58 013593 C 12 5 17 G 36 41 77 013604 G 4 0 4 A 44 46 90 013635 A 28 8 36 G 20 38 58 013659 A 1 0 1 G 47 46 93 013660 C 1 0 1 A 47 46 93 013661 + 21 0 21 - 23 44 67 013679 G 3 0 3 A 43 46 89 013692 A 0 15 15 G 46 31 77 013706 A 1 1 2 G 45 45 90 013712 T 7 7 14 A 37 39 76 013807 A 6 0 6 G 40 46 86 013872 T 1 0 1 C 45 46 91 014088 - 0 1 1 + 40 41 81 014114 G 5 0 5 A 35 42 77 014121 C 4 3 7 G 38 39 77 014135 A 10 0 10 G 32 42 74 014139 T 10 0 10 G 32 42 74 014223 T 2 1 3 C 38 41 79 014224 C 1 0 1 G 39 42 81 014254 C 10 2 12 T 28 40 68 014304 A 0 4 4 G 40 40 80 014605 C 7 4 11 A 39 40 79 014851 C 1 0 1 T 47 46 93 014897 C 22 4 26 T 26 42 68 014965 T 16 6 22 C 32 40 72 015151 C 1 0 1 T 47 44 91 015212 A 17 5 22 C 31 39 70 015320 A 0 1 1 G 44 45 89 015321 G 2 1 3 A 42 45 87 015407 A 3 0 3 C 45 46 91 015444 T 4 1 5 C 44 45 89 015567 T 11 3 14 C 37 43 80 015649 G 4 1 5 A 44 45 89 015685 T 2 0 2 C 46 46 92 015729 C 28 9 37 A 20 37 57 015739 A 1 0 1 C 47 46 93 015801 A 28 9 37 G 20 37 57 015802 T 28 9 37 G 20 37 57 015849 G 11 3 14 C 37 43 80 016083 A 7 0 7 C 41 46 87 016209 A 4 1 5 G 44 45 89 016535 C 6 3 9 A 40 41 81 016808 A 1 0 1 G 47 44 91 016831 G 4 1 5 A 44 43 87 016899 A 1 0 1 G 45 44 89 016998 T 1 0 1 C 45 44 89 017019 T 4 1 5 C 42 43 85 017114 T 4 0 4 A 42 44 86 017480 T 5 1 6 C 41 45 86 017740 C 1 0 1 A 45 46 91 017855 T 1 0 1 C 45 46 91 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 001487: A 004588: TTTG 006531: A 010516: caaa 010751: g 013661: C 014088: TTG Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 012732 G 1 0 1 C 2 0 2 T 43 38 81 012989 T 2 0 2 G 17 4 21 A 27 38 65