SFTPA1 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
GC
C
T
T
A
A
A
C
A
T
A
A
G
A
C
C
C
A
A
A
G
G
T
A
T
G
A
A
A
C
T
A
G
T
A
G
G
A
A
A
A
A
G
C
A
T
A
G
G
50 |
REPEAT
A
G
A
A
G
T
G
C
T
T
C
A
G
G
A
T
A
T
T
G
G
T
C
T
G
G
A
T
G
A
A
G
A
T
T
T
T
A
T
G
G
A
G
A
G
A
C
C
T
C
100 |
var(53):[G:0.05]
A
A
A
A
G
T
A
C
T
G
G
G
A
A
C
A
A
A
A
A
C
C
A
A
A
A
A
T
A
A
G
C
C
A
A
T
A
T
G
G
T
T
A
T
A
T
C
A
A
A
150
C
T
A
A
A
A
A
G
C
T
T
C
T
G
C
A
C
A
G
A
A
A
A
G
A
A
A
A
C
A
A
T
C
A
A
C
T
G
A
G
T
G
A
A
G
A
G
A
C
G
200
G
C
C
T
G
C
A
G
A
G
T
G
G
G
A
G
A
A
A
T
A
T
C
C
A
C
A
A
G
C
T
A
T
T
C
A
T
C
C
A
A
T
A
A
G
G
G
A
T
T
250 |
var(232):[T:0.01]
A
A
T
A
T
C
C
T
G
A
A
T
A
T
A
A
A
A
G
G
A
A
C
T
C
A
A
A
C
A
A
T
T
C
C
A
C
A
G
C
A
A
A
A
C
A
T
T
C
A
300
A
A
T
A
A
T
C
C
A
A
T
T
T
A
A
A
A
A
T
A
G
G
C
A
A
A
T
G
A
T
C
T
G
A
A
C
A
G
A
C
A
C
T
T
C
T
C
A
A
A
350
A
G
A
A
G
A
C
A
T
A
A
A
A
A
T
G
G
C
C
A
C
G
T
A
T
A
T
A
A
A
T
G
A
C
A
C
T
C
A
A
T
A
T
C
T
C
T
A
T
T
400 |
var(396):[T:0.12]
C
C
T
A
A
G
A
T
A
A
A
T
G
C
A
A
A
T
G
A
A
A
C
C
A
A
A
A
T
A
A
A
T
T
A
T
C
T
C
A
C
C
C
C
A
G
G
T
A
G
450 |
var(434):[C:0.08]
A
C
T
G
G
C
T
T
T
T
A
T
C
A
A
T
A
A
G
A
C
A
A
A
A
A
A
G
A
A
T
A
A
A
T
A
C
T
G
G
T
G
C
G
G
G
T
G
C
A
500
G
A
G
A
A
A
A
G
G
G
A
A
C
T
C
A
T
A
C
A
C
T
G
T
T
G
G
T
G
G
A
A
A
T
G
G
A
A
A
G
T
A
C
T
A
C
A
G
C
C
550
A
T
T
A
T
G
G
A
A
A
G
C
A
A
A
A
T
G
A
A
G
C
T
T
T
C
T
T
G
A
A
A
A
C
C
T
A
A
A
A
C
T
A
G
A
A
C
T
A
T
600 |
var(578):[C:0.08]
C
A
T
A
T
A
A
T
C
T
A
G
C
A
A
T
C
C
C
A
C
T
A
C
T
G
G
G
T
A
T
T
C
A
A
A
G
A
A
A
A
G
G
A
A
C
C
C
A
G
650 |
var(647):[G:0.09]
T
A
T
G
T
T
A
A
A
G
A
G
G
T
A
T
C
T
A
C
C
C
T
C
C
T
A
T
G
T
T
T
A
T
T
G
C
G
G
A
G
C
T
A
T
T
C
A
T
A
700 |
var(687):[T:0.08]
A
T
A
G
C
C
A
A
G
A
T
A
T
G
G
A
A
T
C
A
A
C
C
T
A
A
G
T
G
T
C
T
A
T
C
A
G
T
G
A
A
T
G
A
A
T
G
G
A
T
750
T
T
A
A
A
A
C
A
T
G
T
A
G
T
A
A
C
T
A
A
A
C
A
C
A
A
T
G
G
A
A
T
A
C
A
G
T
T
C
A
T
C
C
A
T
A
A
G
A
A
800
A
G
A
A
T
A
A
A
A
T
T
C
T
G
C
C
A
T
T
C
A
T
A
G
C
A
A
C
A
T
G
G
G
T
G
A
G
C
C
A
T
T
A
T
G
T
T
A
A
G
850 |
var(835):[A:0.09]
T
G
A
A
A
T
A
A
A
G
C
C
A
G
G
A
A
A
A
G
A
A
A
A
T
T
A
A
A
C
A
C
A
G
C
A
T
G
T
T
C
T
C
A
C
T
C
A
T
T
900
T
G
T
G
G
A
T
G
C
T
A
A
G
A
A
A
A
C
T
T
A
G
T
T
A
A
T
C
T
C
A
T
A
G
A
A
G
T
A
A
A
C
A
T
A
G
A
A
C
A
950
G
T
A
A
G
T
A
A
A
C
A
G
T
A
G
A
A
C
A
G
A
A
T
A
T
A
T
T
A
G
A
G
G
C
T
G
G
G
A
A
G
A
T
T
A
A
G
G
G
G
1000
A
A
T
G
A
G
A
A
A
T
G
G
G
A
A
A
G
G
T
G
G
G
G
C
A
A
T
G
G
G
T
A
C
A
A
A
A
T
T
A
C
A
G
C
T
A
G
A
T
A
1050 |
var(1029):[C:0.02]
G
G
A
G
A
A
A
T
G
A
G
T
T
G
T
A
G
C
C
T
T
C
T
T
T
A
G
C
G
C
T
G
T
A
G
G
G
T
G
A
C
C
A
T
A
G
C
C
A
A
1100 |
var(1064):[T:0.01]
C
A
A
A
A
A
A
A
T
T
A
T
G
T
A
T
A
C
T
T
T
C
A
A
A
T
A
G
C
T
A
A
A
A
G
A
G
A
G
G
A
T
T
T
T
G
A
A
T
G
1150 |
var(1118):[A:0.01]
|
var(1147):[G:0.03]
T
T
A
T
C
A
A
C
A
C
A
A
A
A
C
A
G
T
A
A
G
T
T
T
T
T
G
A
G
G
T
G
A
T
G
A
A
T
A
T
G
C
T
G
C
T
T
A
C
C
1200
T
T
G
A
T
T
T
C
A
T
C
A
T
T
G
C
A
C
A
T
T
A
C
A
T
A
C
A
T
G
T
A
T
C
A
A
A
A
T
A
G
T
C
C
A
C
T
G
T
G
1250 |
var(1219):[G:0.12]
C
C
C
A
T
A
T
G
T
A
T
G
T
A
A
A
A
T
A
A
T
T
G
T
G
T
C
A
A
A
A
A
T
A
A
CATTT TTTAAATTAA
1300
AAAGATAGTA AAGAATATAT TACCAGAAGT AAAAACAAAC AAACTCCAAG
1350
AAAAGACTAT AGTTACAATT ATATCCCTAT GTGTCAATCT GAAAAGATGG
1400
CTGGCATATG TAAGAGAAAA CACTAATTGT AGAACAGTAT ATGCAGTATG
1450
ATCTTATTGG TGCAAAGTAA GAGAATGTGT GTGTGTGTGT CTGCACGTGT
1500
GTGTTCCTGA GCCTATTTCT TTGAAGACAG TTGCTGCCAC CTGCCAGTTT
1550
CAATTCCTCC AAGGTGCAGA ATGGGAAAAC CTCTCTCCCT CTCCTCAAAA
1600
CCTCAGTAAA GCATGATGTA TTTCTCTGGG GTTTGGAAG
G
TTCAA
A
ATGT
1650 |
var(1640):[T:0.02]
|
var(1646):[G:0.09]
TCAGGGCAGA AAGAAGGGTG ACAAGGCTGC ATTGGCAAAA ATGAAAATAA
1700
AAACAAGTAA TGTGATTTTT AAGGCAAATT GGATGCTATT TCTAGGCAAC
1750
AGAAATATAT TTACAGTGTT ATTCTTTTTA AAAATAAAAT GGCA
T
T
A
TTA
1800 |
var(1795):[:0.09]
GAGAGGCATC AATGTAATAT ATATGTATGT AAACATACAG CACA
C
AATAT
1850 |
var(1845):[T:0.01]
ATGTGTGTGT ATATATATG
T
ATATAATGCA TACACACATA TTTGCTTAGT
1900 |
var(1870):[C:0.02]
TT
A
CTGGCTG CCTCAGCAAA GAAAA
G
CCTC AACTTCCATC CCCTTCATGT
1950 |
var(1903):[G:0.12]
|
var(1926):[T:0.02]
GGCTGAGCTG TCCCTTAGAT TCTGACATTA TAAGCGATTT TGAAATATAT
2000
CCATGATTAG TAAATTAATT TGTGCATTCC CTTGTCTTCA TGTACAGGTA
2050
GAATAAGCAT GTTCCTCTGA CTCTGGGAAG GTTCTAGCAG AGGACTGAGC
2100
TGGAAAGAAG ATTTCTGGTA ATTCTGGCAA TCCA
T
GTAAC CCCTGTCATC
2150 |
var(2135):[C:0.09]
CTCAGCTGAC TGAAGTATGG AATGGGGATT TACTCTCT
A
T ACAACTCATA
2200 |
var(2189):[G:0.23]
GAGTGCTGTG ATGATCCAAA GTGACAGAAA GATCCAGCAG TCACAGACAG
2250
CCTCCTCCTA CTGCTAGCAC CCAGGGCAGC TGGAAAAGGG GGCAGGGGAA
2300
GGGTCCCCTG AGCACTAAGA GAGAGGCCTC AAATATGCAG AGAAGCCCAT
2350
GCACTGTCCT
T
AGTGCCTGT ACATGGCCTC
C
A
C
T
C
T
G
C
A
C
C
C
C
T
T
T
G
A
A
A
2400 |
var(2361):[C:0.03]
|
REPEAT
|
REPEAT
C
G
G
G
A
G
A
G
T
C
C
C
C
T
G
A
T
C
C
C
C
C
T
C
A
C
A
G
G
A
T
G
C
A
T
G
A
C
A
G
G
G
G
T
G
T
G
G
C
T
2450 |
var(2401):[T:0.09]
C
A
C
C
T
G
T
T
T
G
G
T
T
G
C
C
C
C
A
C
T
G
C
T
C
A
A
A
C
C
C
C
T
A
G
G
G
G
G
A
G
C
A
T
G
C
A
G
A
T
2500
G
G
G
C
A
G
G
T
T
C
A
G
A
G
G
C
T
G
G
G
G
T
G
A
G
T
G
C
T
T
T
G
G
G
C
T
C
C
A
G
C
T
G
T
T
C
A
G
T
A
2550
G
A
G
T
C
T
A
G
G
G
A
T
G
G
G
T
G
C
C
T
G
T
A
A
T
C
C
T
G
G
T
G
T
T
A
C
A
A
A
A
C
T
C
T
T
T
C
A
G
T
2600
T
T
T
G
C
A
T
A
C
G
C
A
G
G
T
G
G
C
T
T
G
A
G
T
G
T
T
A
A
T
C
A
G
C
T
C
A
A
T
G
G
A
C
C
C
T
C
T
G
C
2650 |
var(2606):[G:0.02]
C
T
T
A
T
C
C
T
A
A
G
G
G
C
A
G
A
G
G
G
C
C
T
G
T
G
T
G
A
C
A
G
C
T
T
T
C
T
G
T
A
T
C
C
C
A
A
G
C
T
2700
T
T
C
A
C
C
C
A
G
C
A
T
C
C
T
G
G
A
A
G
A
A
T
C
A
G
A
T
C
A
C
A
T
G
T
G
G
G
C
T
T
G
A
A
G
G
A
T
G
A
2750
G
T
G
C
A
A
G
A
T
T
T
T
A
T
T
G
A
G
T
G
G
T
G
G
A
G
G
T
G
G
C
T
C
T
C
A
G
T
G
A
G
A
T
G
G
A
T
T
G
G
2800 |
var(2764):[C:0.03]
G
G
A
C
T
G
G
A
A
A
G
G
G
A
A
A
T
G
G
A
G
T
G
G
G
A
A
G
G
T
G
A
T
C
T
T
C
C
C
T
T
G
G
A
G
G
C
G
G
G
2850
C
C
A
T
C
C
A
G
T
A
G
C
T
G
G
T
A
T
C
T
T
C
T
C
C
G
A
T
C
G
C
C
C
C
T
G
G
G
C
A
A
A
C
T
C
C
C
C
T
C
2900
A
G
T
G
T
T
C
A
G
A
T
G
T
T
C
C
T
C
C
T
C
T
T
C
T
C
T
C
T
C
T
C
T
C
T
G
C
C
A
C
G
T
C
G
T
T
C
C
A
C
2950
T
G
T
C
C
A
T
C
T
G
C
T
T
G
T
C
T
G
C
T
A
G
T
C
T
G
C
T
G
G
T
C
T
G
C
T
T
C
T
G
G
A
G
C
C
T
G
G
G
G
3000 |
var(2999):[A:0.04]
T
T
C
A
A
G
G
T
T
T
A
T
A
T
G
G
T
T
G
C
A
G
G
A
T
A
G
G
G
G
T
T
G
T
G
G
C
A
G
A
A
C
A
A
A
A
G
G
C
A
3050 |
var(3048):[A:0.03]
A
C
T
T
T
T
T
G
G
T
C
A
T
G
A
A
A
A
C
A
G
A
A
A
T
G
T
C
T
T
T
T
C
T
C
A
T
T
T
A
G
G
G
C
C
A
C
A
G
G
3100
T
C
T
T
C
A
G
G
C
T
T
G
A
G
G
G
T
G
G
G
G
T
C
T
T
T
G
T
T
G
G
G
G
A
G
T
C
A
C
C
C
T
T
T
T
T
T
T
A
C
3150
C
C
A
G
T
G
T
G
T
C
A
C
T
G
T
C
T
C
C
T
G
T
C
A
T
T
A
T
C
A
T
T
C
C
C
C
T
C
C
T
C
T
G
A
A
G
A
G
G
C
3200 |
var(3151):[A:0.03]
|
REPEAT
A
C
A
T
C
T
A
A
C
T
G
C
C
T
T
T
A
G
A
A
T
A
T
G
G
A
C
G
A
T
G
A
C
C
A
G
T
C
T
T
A
G
C
T
A
C
T
T
C
C
3250 |
var(3234):[A:0.12]
T
G
C
T
G
A
C
A
G
G
G
G
G
A
G
T
T
G
T
T
T
T
G
G
G
G
A
A
A
A
T
G
T
C
A
G
T
C
A
G
A
T
T
C
C
T
C
C
C
A
3300 |
var(3268):[T:0.12]
G
A
C
G
T
C
T
A
T
C
T
A
A
A
G
G
T
C
C
C
T
G
A
C
A
A
A
A
G
G
G
A
G
C
C
A
T
C
A
T
C
T
G
A
G
G
C
T
C
T
3350 |
var(3304):[A:0.03]
G
A
T
T
G
C
C
T
G
A
T
C
A
T
C
T
T
G
A
G
T
T
T
G
A
T
A
A
C
C
T
C
T
A
A
G
T
G
A
G
A
G
A
G
G
A
A
A
A
A
3400 |
var(3362):[G:0.02]
A
A
A
A
G
T
T
T
T
A
T
A
A
G
A
T
T
A
A
G
T
A
G
G
C
A
T
G
G
G
T
T
A
A
A
A
T
T
G
T
G
T
A
T
T
A
T
A
C
A
3450
A
G
G
A
A
A
G
A
A
T
C
T
A
G
T
G
C
C
A
A
A
G
A
T
T
A
C
A
G
A
A
A
T
A
A
G
A
A
G
T
A
A
A
A
T
A
T
A
C
T
3500
A
A
T
T
A
C
C
C
T
G
A
A
A
A
C
A
C
T
A
T
T
G
T
A
C
C
C
C
G
T
G
G
T
A
T
A
G
A
A
C
A
G
A
A
C
A
A
A
G
G
3550 |
REPEAT
T
A
A
G
A
A
C
C
A
C
A
A
G
C
A
T
A
G
G
C
A
A
G
A
C
T
A
C
A
A
A
G
A
G
G
A
C
A
T
A
C
A
T
G
A
A
A
T
G
T
3600
T
A
A
T
T
A
A
C
A
C
T
A
A
C
C
T
T
T
T
G
T
G
A
T
T
T
T
T
A
G
T
T
T
G
A
G
T
A
C
C
C
T
G
A
T
C
T
C
T
T
3650 |
var(3612):[T:0.05]
C
A
C
A
A
T
G
G
T
A
T
T
T
T
G
G
G
T
G
C
T
C
C
T
C
T
A
G
G
T
T
G
A
A
A
G
A
G
G
T
G
A
C
T
C
T
G
T
T
G
3700 |
var(3667):[A:0.12]
G
C
T
T
C
C
C
A
G
G
C
C
T
T
T
A
C
T
T
G
A
G
T
A
T
A
A
T
G
A
A
T
C
C
A
A
G
A
G
T
C
T
A
T
T
C
T
G
G
T
3750
G
A
C
C
T
T
G
A
C
C
T
T
C
A
C
C
A
C
C
A
C
A
G
G
A
G
T
G
A
A
A
A
G
A
A
G
T
A
C
A
G
T
G
C
A
A
G
G
T
C
3800
C
C
T
C
C
C
A
A
C
C
A
G
G
G
C
A
T
A
T
T
G
A
G
A
G
A
G
A
A
A
G
G
T
A
A
G
G
A
A
G
T
A
C
C
T
T
T
A
C
C
3850
A
G
T
A
C
T
A
G
G
T
C
C
C
C
T
G
G
G
T
T
G
A
A
T
A
G
A
G
G
T
G
G
G
C
C
T
G
G
T
T
C
G
T
G
G
G
A
T
T
G
3900
G
G
C
C
T
T
C
A
A
C
A
G
T
T
G
T
T
T
C
A
G
T
T
C
C
T
G
T
T
G
G
A
A
A
T
G
G
A
C
C
A
A
A
G
A
G
G
T
T
A
3950
T
G
T
G
C
T
T
A
A
T
T
A
A
A
A
C
A
A
A
G
G
T
T
T
C
T
T
G
G
T
C
T
A
G
C
A
A
G
A
A
A
T
C
A
T
T
C
A
T
G
4000 |
var(4000):[A:0.09]
A
G
A
A
A
A
T
G
T
C
A
T
C
C
A
T
A
C
A
T
A
G
T
C
T
C
A
A
A
G
A
G
A
C
T
C
A
A
A
C
C
C
A
G
A
C
T
T
G
A
4050 |
var(4008):[A:0.01]
A
G
G
A
G
T
G
T
T
T
C
T
G
A
T
A
T
A
T
A
G
C
A
G
G
A
C
T
A
T
G
G
A
A
A
G
A
A
G
A
G
T
A
G
T
C
C
A
G
G
4100
G
G
A
G
A
T
G
A
G
T
C
T
C
C
T
G
A
G
A
C
A
G
T
T
T
C
T
T
G
A
G
G
T
G
C
C
T
T
T
T
G
A
T
A
A
T
A
T
C
A
4150
T
T
T
T
T
G
T
C
T
T
T
T
C
T
A
C
C
T
T
T
C
C
T
G
A
G
G
A
T
T
G
T
G
G
T
C
T
C
C
A
A
A
C
A
C
A
A
T
G
A
4200 |
var(4151):[:0.05]
A
G
A
T
G
G
T
A
C
T
G
T
A
T
G
C
C
T
A
G
T
G
C
C
T
T
T
G
A
G
A
C
C
C
C
C
T
G
G
G
T
G
A
C
A
G
C
T
G
C
4250
C
T
T
G
A
A
C
G
A
G
G
G
G
C
C
A
T
T
A
T
T
G
C
T
C
T
G
G
A
G
G
T
A
C
T
T
A
G
G
G
G
G
T
C
C
A
A
A
G
T
4300 |
var(4291):[A:0.22]
G
A
G
G
A
A
T
T
A
T
C
T
C
A
T
T
G
A
T
T
A
G
T
A
C
T
A
T
T
A
T
C
A
C
C
T
C
A
G
A
G
G
C
T
T
T
C
T
C
T
4350
G
T
C
T
G
A
C
A
T
G
G
A
A
A
T
G
C
T
T
C
T
A
C
T
C
A
G
T
T
A
G
T
G
A
A
G
G
T
A
T
C
T
A
T
C
C
A
C
A
C
4400
T
A
G
G
A
G
G
T
A
C
T
G
G
A
T
G
C
C
C
C
T
T
A
C
C
T
T
T
G
G
C
A
T
A
T
G
G
G
T
G
A
A
A
T
C
C
A
T
T
T
4450
G
C
C
A
G
T
C
T
T
C
C
C
C
T
A
G
G
T
A
G
C
C
T
T
G
G
A
G
A
A
G
A
C
A
C
T
A
T
T
A
A
T
T
A
A
G
G
G
G
A
4500
T
T
G
T
T
T
T
T
A
A
G
G
C
A
G
G
T
C
T
T
G
C
A
A
G
C
A
T
T
A
A
C
A
A
C
C
T
G
T
T
T
A
A
C
T
G
T
T
T
G
4550
T
A
T
C
A
G
G
T
T
T
T
T
A
T
C
T
G
A
G
A
A
C
A
A
T
C
T
G
A
G
C
C
A
G
T
C
A
G
T
A
G
G
T
T
T
T
A
T
C
T
4600 |
var(4578):[C:0.02]
G
T
A
C
C
T
A
G
G
T
G
G
A
A
G
G
C
C
T
G
G
A
G
A
A
G
G
C
T
T
T
T
A
A
G
A
A
C
T
T
T
C
C
A
T
T
G
G
T
T
4650
G
C
C
A
G
C
T
G
G
T
A
G
A
T
G
A
A
G
C
A
T
G
C
C
A
T
C
C
T
A
A
G
A
G
G
T
G
T
C
C
C
A
T
T
C
T
A
T
T
T
4700
C
C
A
T
A
G
G
A
G
A
G
T
A
T
T
G
A
G
G
T
T
T
T
A
T
T
T
C
T
C
T
G
A
T
G
G
G
G
G
C
C
C
T
C
C
A
A
G
A
T
4750
C
A
G
T
A
A
G
G
C
T
T
C
A
A
G
T
G
G
G
T
C
A
G
A
G
A
C
C
T
G
G
G
G
C
C
C
C
C
T
T
G
C
T
G
C
T
G
C
T
A
4800 |
var(4755):[G:0.01]
G
C
T
G
C
T
C
A
G
T
C
T
A
G
C
T
A
G
C
T
GCT
C
A
T
A
A
A
G
C
A
G
G
G
T
G
T
G
A
A
A
T
A
G
T
T
A
C
T
4850 |
var(4801):[C:0.01]
|
REPEAT
|
var(4835):[:0.78]
C
T
G
A
A
T
G
A
T
A
T
T
G
T
T
G
A
G
A
G
C
A
C
A
C
C
T
C
T
C
T
C
C
T
C
A
G
G
C
A
C
A
A
G
T
G
C
T
C
A
4900
A
C
T
G
G
C
C
A
A
A
C
T
A
A
T
T
A
C
C
C
T
C
A
T
G
A
G
A
G
C
A
C
T
T
G
A
A
T
T
A
G
G
C
A
A
A
G
G
A
A
4950 |
var(4941):[A:0.07]
A
A
A
C
A
G
T
T
A
A
C
A
T
T
T
A
T
A
C
T
G
A
T
T
C
T
A
A
G
T
A
T
G
C
T
T
T
C
C
T
A
G
T
T
C
T
C
C
A
C
5000
A
C
C
C
A
T
G
C
C
A
C
T
A
T
C
T
G
G
A
A
A
G
A
C
A
G
G
A
A
C
T
T
C
C
T
C
A
C
A
G
C
T
A
A
T
G
G
G
T
A
5050 |
var(5027):[A:0.01]
T
C
C
C
A
T
T
A
A
A
T
G
C
C
A
T
C
A
G
G
A
A
A
T
T
A
A
T
A
G
A
C
T
A
T
T
T
T
G
C
T
C
A
G
T
T
T
T
C
C
5100
T
C
C
C
A
C
A
G
G
A
A
G
C
G
G
C
TCAG CCCC
T
A
G
C
T
G
C
T
C
A
G
T
C
T
G
C
C
A
G
C
C
C
G
T
T
T
5150 |
REPEAT
C
C
C
T
C
A
G
C
T
A
T
T
T
C
A
T
C
C
A
T
C
C
C
T
C
T
T
T
G
G
T
G
G
C
C
T
T
T
A
C
A
A
T
G
T
A
T
T
A
C
5200 |
var(5166):[A:0.03]
T
G
C
C
A
C
T
T
C
C
T
G
T
G
C
G
T
A
A
G
A
A
T
C
C
C
C
T
C
G
G
T
T
G
C
T
T
G
A
G
T
G
T
T
T
G
G
G
G
A
5250 |
REPEAT
|
var(5216):[A:0.07]
G
G
A
G
A
A
A
G
G
A
G
G
A
G
A
T
A
G
G
T
T
T
A
A
T
C
C
T
T
T
C
T
T
C
G
C
C
C
A
A
T
G
C
C
C
T
G
G
T
C
5300
C
C
C
T
C
T
G
A
C
A
A
G
A
C
C
A
G
G
C
T
T
A
G
G
T
G
C
T
T
C
A
C
T
G
A
A
G
T
C
T
G
A
C
A
G
A
G
C
T
G
5350
A
G
C
T
T
C
A
G
A
T
T
T
T
G
A
A
A
C
A
T
T
A
T
A
T
C
C
T
C
T
G
T
T
A
G
C
A
A
G
A
A
A
A
T
T
A
A
G
A
G
5400 |
var(5376):[A:0.01]
G
A
G
C
C
T
T
A
C
T
G
C
C
C
T
T
C
T
G
A
G
A
G
A
T
T
T
C
C
T
C
A
G
T
T
G
G
A
G
T
G
C
A
A
A
A
G
A
G
A
5450
A
G
G
T
C
C
T
C
C
A
T
G
T
A
T
T
G
C
A
A
A
A
C
T
T
T
G
A
C
C
T
G
A
G
G
A
T
A
A
A
G
G
A
A
C
T
T
G
G
A
5500
G
A
G
A
T
C
T
C
T
C
C
A
T
A
A
T
G
C
C
T
G
C
C
C
A
A
A
C
A
A
G
T
G
G
G
A
G
C
T
G
T
C
T
T
G
G
A
A
T
C
5550
C
C
T
G
A
G
G
T
A
A
C
A
T
T
G
T
C
C
A
G
G
T
T
A
A
C
A
G
G
G
T
G
G
T
T
T
G
G
T
T
A
G
A
G
G
G
A
T
C
C
5600 |
var(5583):[T:0.02]
T
C
A
A
A
T
T
C
A
A
A
C
A
A
A
T
A
C
T
G
G
G
A
G
T
T
G
T
G
G
T
A
T
A
A
T
G
G
T
A
T
G
C
A
G
A
A
G
A
A
5650
G
G
C
A
T
C
C
T
T
T
A
G
G
T
C
C
A
G
G
A
A
C
C
A
T
T
T
A
G
T
T
C
C
C
T
C
A
G
G
T
A
T
T
T
G
A
G
C
T
A
5700
G
C
A
G
G
G
T
A
T
A
C
G
G
A
T
T
G
G
G
A
A
T
C
A
T
T
G
A
A
T
G
T
A
T
T
G
G
A
A
C
C
A
C
A
G
C
C
T
C
A
5750 |
var(5740):[A:0.01]
T
T
A
A
C
A
A
G
G
A
G
G
T
G
G
T
T
C
T
G
A
A
C
T
A
G
C
C
T
C
C
A
T
T
T
C
T
A
G
T
T
G
G
G
T
T
T
T
T
G
5800
T
A
C
C
C
C
C
A
A
T
A
T
T
G
G
G
G
T
A
T
T
A
C
A
A
G
G
G
C
T
A
T
T
G
C
A
G
G
G
T
T
T
G
A
G
T
G
G
G
C
5850
C
C
T
C
C
A
T
C
T
T
C
A
A
G
T
T
A
T
C
A
A
T
G
A
T
G
G
C
T
T
C
T
A
G
T
C
C
T
T
T
C
C
T
A
A
C
C
T
C
T
5900
A
G
T
T
T
C
A
G
G
G
G
A
T
A
T
T
G
T
T
T
C
T
G
G
T
T
A
G
G
A
A
A
G
G
A
G
G
T
G
G
G
A
T
C
C
T
T
A
A
G
5950
A
T
G
G
A
C
C
C
A
G
A
C
T
G
G
T
A
T
G
G
T
A
G
T
T
G
T
G
G
C
T
C
T
G
A
C
A
A
T
C
T
T
C
C
C
T
A
G
A
G
6000
T
T
G
C
C
C
A
A
A
C
T
T
C
T
G
G
G
T
T
A
A
T
A
T
T
G
G
T
C
T
C
T
A
C
T
A
G
G
A
T
G
A
G
A
C
A
A
A
G
A
6050
G
T
T
T
C
C
C
T
A
G
G
G
G
C
C
A
T
C
A
G
A
A
T
G
A
T
G
G
T
C
C
C
C
A
C
A
T
G
G
G
C
C
G
G
A
A
T
A
T
C
6100
C
C
T
A
C
C
C
A
A
C
A
G
A
G
G
A
G
T
T
G
G
G
C
T
T
T
C
A
G
G
C
A
T
A
A
T
T
A
G
A
A
A
A
G
C
T
T
T
G
G
6150 |
var(6131):[A:0.02]
T
G
A
A
C
A
A
C
C
C
C
A
G
G
T
A
C
A
A
C
T
A
A
G
G
G
G
T
T
G
G
A
A
A
A
A
A
T
A
T
C
G
G
G
T
T
A
A
A
G
6200 |
var(6169):[G:0.27]
A
C
C
T
T
C
C
T
G
A
G
A
T
G
T
C
C
C
T
C
A
C
A
G
T
C
A
T
G
C
T
A
A
G
A
G
A
G
G
A
G
A
G
G
G
G
G
C
C
T
6250
G
G
A
T
T
C
A
A
G
A
G
G
A
G
A
A
C
T
G
A
G
A
G
A
C
C
A
G
T
C
C
C
A
G
T
G
T
C
C
A
A
A
A
G
G
A
G
G
T
C
6300
C
A
C
T
T
T
C
C
T
C
T
C
T
T
C
G
A
T
T
T
C
C
A
T
G
A
T
T
A
C
C
C
A
G
G
G
C
A
C
C
T
T
G
A
T
G
A
T
A
A
6350 |
var(6334):[C:0.03]
T
G
G
T
G
G
T
C
T
G
G
A
C
T
A
C
A
G
G
A
G
C
C
A
G
G
A
G
A
G
G
A
G
C
C
C
T
G
G
G
A
C
C
T
G
T
C
A
G
T
6400
C
C
T
G
C
T
G
C
T
G
G
A
C
C
A
T
T
T
G
G
A
A
G
A
C
T
G
G
C
T
C
T
G
G
A
C
C
T
G
G
T
G
A
C
C
A
G
C
A
T
6450 |
var(6446):[C:0.01]
G
C
C
C
A
G
G
A
A
C
A
G
T
C
C
A
C
C
C
T
C
C
A
G
T
G
G
T
C
C
C
C
A
C
T
G
C
A
G
A
T
T
G
G
A
C
A
G
G
G
6500
T
T
G
A
G
G
T
A
G
C
T
T
C
C
T
C
A
T
G
C
T
G
T
C
T
G
A
G
A
A
A
T
T
C
T
T
G
A
A
A
T
G
C
C
C
T
G
A
T
T
6550
T
G
C
C
A
C
A
T
C
T
G
T
A
G
C
A
A
T
T
G
A
C
A
G
G
T
G
C
A
C
C
C
T
G
G
G
A
A
T
T
C
T
G
G
G
G
T
T
T
G
6600
T
G
G
G
C
T
T
G
T
C
T
G
C
T
G
G
C
C
A
T
T
A
A
A
G
T
C
T
C
T
G
T
C
T
C
T
T
T
C
C
T
G
T
A
T
T
T
C
C
T
6650 |
var(6614):[G:0.02]
|
var(6629):[:0.09]
C
T
C
T
C
T
C
T
T
G
T
G
C
C
T
A
C
C
T
A
T
C
T
C
T
A
T
T
A
T
A
A
A
A
A
A
C
C
A
A
G
G
T
G
G
G
T
A
C
T
6700
T
T
C
A
G
A
A
G
G
T
T
C
T
C
T
A
A
A
G
T
A
C
T
C
T
C
T
T
G
T
C
C
C
A
G
A
G
C
C
T
G
T
T
T
T
G
T
A
G
C
6750
T
T
C
C
T
C
C
T
G
A
T
A
T
C
A
G
G
G
G
C
T
G
C
C
T
G
A
G
T
A
G
T
A
A
A
T
T
T
A
T
G
C
T
T
T
A
G
G
A
T
6800
T
G
G
T
T
G
T
C
C
C
T
C
A
G
C
T
G
A
A
T
C
A
G
G
G
G
A
T
A
G
A
C
A
G
G
T
G
T
G
C
T
T
T
A
C
T
A
A
G
G
6850 |
var(6809):[T:0.10]
C
C
T
C
C
C
T
T
G
G
C
C
T
T
T
C
C
A
G
G
A
A
G
G
C
A
G
T
G
G
G
A
T
T
T
T
C
A
T
C
A
A
A
T
C
C
C
T
G
G
6900
T
C
A
A
T
C
A
T
G
G
A
T
G
A
T
T
T
A
G
T
A
T
A
A
T
T
G
A
G
A
G
G
C
T
T
G
G
T
C
C
T
G
G
T
C
T
T
A
C
A
6950 |
var(6936):[T:0.03]
T
A
A
G
C
C
C
T
C
C
A
T
T
A
T
G
C
A
C
A
C
C
T
G
A
A
A
G
T
G
C
C
T
C
C
T
C
T
T
C
C
A
G
G
C
T
T
C
C
A
7000
T
C
T
T
G
T
C
A
T
T
G
G
A
A
T
C
C
T
A
T
T
T
A
G
G
G
T
A
A
T
C
C
A
T
T
G
A
T
A
C
T
G
C
T
T
C
T
C
T
C
7050 |
var(7031):[A:0.02]
C
C
A
G
T
T
G
G
A
T
A
A
T
G
T
T
T
G
C
C
C
C
C
T
T
C
C
C
T
G
A
C
A
C
T
A
T
A
T
G
T
G
A
T
A
C
T
A
A
G
7100
C
T
C
A
T
C
C
C
C
A
A
A
T
C
T
C
T
C
T
G
C
T
G
C
T
T
G
C
A
G
A
G
C
A
G
G
C
T
G
C
T
T
C
T
C
A
G
T
G
T
7150 |
var(7136):[C:0.12]
C
T
G
T
C
A
A
G
G
T
C
T
G
G
T
T
C
A
A
A
A
G
C
A
A
C
A
T
A
A
T
G
T
C
T
C
T
C
C
A
G
G
A
G
A
G
A
T
C
A
7200
A
A
T
A
T
T
T
G
G
G
T
G
A
A
A
T
T
C
T
G
G
A
A
A
G
C
C
T
C
T
A
T
A
T
A
T
C
T
G
T
C
G
G
G
G
T
C
A
T
C
7250
T
G
A
A
A
A
G
T
T
C
C
C
A
A
G
A
T
C
C
C
C
C
T
T
A
A
T
T
C
A
C
T
T
T
A
A
G
T
C
C
T
G
T
A
G
G
G
A
G
G
7300
A
G
G
G
G
A
A
C
T
G
G
A
C
C
T
T
A
C
T
G
G
G
C
C
C
A
A
A
T
T
C
A
C
C
A
G
G
C
A
T
T
G
G
T
T
G
A
A
G
G
7350
G
G
C
A
A
G
A
G
T
G
A
G
G
T
T
G
G
G
G
C
T
T
G
T
C
T
A
G
G
G
T
G
A
G
G
A
T
T
T
T
T
A
G
G
A
G
G
G
G
G
7400
C
A
A
G
T
G
A
G
A
G
G
C
T
G
A
A
G
C
T
G
A
A
T
A
G
G
G
A
G
G
T
C
G
A
G
G
T
A
G
A
C
C
C
A
G
A
G
G
G
G
7450 |
var(7432):[T:0.03]
A
A
G
A
G
C
T
G
G
A
G
G
G
G
G
C
T
G
G
C
T
T
C
T
C
T
G
C
T
T
G
G
G
G
T
G
C
C
T
C
T
G
G
G
A
T
T
C
A
T
7500
A
T
C
T
T
T
A
G
T
T
T
C
C
T
A
G
G
C
T
T
G
C
C
C
C
T
T
G
C
A
G
T
C
C
T
C
C
C
T
G
A
G
A
T
G
G
C
A
A
A
7550
C
A
G
G
A
G
G
G
C
T
G
T
A
T
C
A
A
T
C
C
T
A
C
A
C
T
G
T
C
A
G
C
A
A
A
G
G
T
C
T
G
G
A
T
T
G
C
C
T
T
7600
G
C
A
A
G
G
T
A
T
A
G
A
A
A
A
C
C
T
G
C
A
C
A
T
A
T
G
G
G
A
C
C
T
C
A
G
A
C
C
A
T
T
T
G
T
C
T
T
C
A
7650
T
G
T
A
T
A
C
A
G
A
A
A
A
G
G
C
C
T
G
A
T
C
A
C
C
G
G
A
T
A
C
T
A
T
C
G
A
A
A
T
G
A
A
A
G
G
T
T
C
A
7700
T
T
C
C
T
G
A
G
G
T
C
C
A
C
C
C
G
G
T
C
C
T
T
C
A
T
A
A
T
T
T
G
G
C
C
A
A
A
C
C
T
T
T
G
T
G
C
A
G
A
7750
G
G
G
C
T
A
T
G
A
G
G
C
A
T
T
T
T
T
C
T
T
C
C
A
G
A
T
T
A
A
G
A
G
G
A
T
C
A
A
A
G
C
A
G
T
C
C
C
A
T
7800
T
G
G
T
T
C
T
G
G
A
T
A
C
A
C
T
C
C
A
G
A
G
G
G
G
T
A
T
A
A
G
C
T
G
G
G
A
G
T
G
G
T
G
A
A
G
A
G
A
G
7850
A
T
G
G
T
T
G
C
C
T
A
T
T
C
T
G
A
A
A
G
A
C
A
G
A
G
A
A
T
A
G
A
G
G
CATGCC TCATTCCCTT
7900
CCTTCTTTAG TGAAAACTCA GGGTGTGATG GAGAGAGAAA GCAAGAC
T
GT
7950 |
var(7948):[A:0.02]
GGACTCTGAG GTGGCTTGGC ATGGGCGCCC AAGGACTGGC AG
T
GTGAAGA
8000 |
var(7993):[G:0.07]
GGATATCCCT GCAGAGGGAA GAAGCCCAAC
G
TGGAGGGTG AGGCCCCGAG
8050 |
var(8031):[A:0.02]
GAGAA
C
GAGA AAGATACTGA AGGAGAGCGG ACTGGACCGG CGGGGGCAGT
8100 |
var(8056):[T:0.01]
GGAGCCTAAG CAGGGGGAGG AGGCTGTGGA CACAGCTGAG TGGCCTGGTG
8150
TGGGCACT
C
G G
A
A
C
T
C
A
G
C
A
G
G
A
A
C
T
A
C
A
G
C
A
A
T
T
C
T
T
A
G
A
G
C
T
A
A
G
A
G
T
8200 |
var(8159):[T:0.01]
|
REPEAT
G
A
C
A
A
A
T
T
T
G
T
G
T
T
G
G
G
A
G
A
A
C
C
A
T
C
T
T
C
T
T
A
G
C
G
A
C
A
T
T
C
T
T
T
A
G
A
T
T
C
8250 |
var(8233):[A:0.23]
A
C
T
G
G
T
G
C
CA TGTGCTGGCA AACTGTAACT GTTTCAACAT CAAACACACG
8300
TAGTGCCCCC TGCAGCCCGC AGGTGGGTGC TCGGCACCCC CTGGTGGTCA
8350
GTGGTAGGCC TCACGAACGA GTCCACATTG CTACAAATCA ATCAATGGGC
8400
AACAGA
G
A
C
A
G
T
G
T
G
A
T
G
A
G
G
A
A
T
G
G
G
A
T
C
T
T
T
A
C
A
A
T
A
G
C
C
C
C
A
A
A
G
T
G
8450 |
REPEAT
T
G
T
C
C
T
C
A
T
A
A
C
A
T
A
G
T
C
A
C
T
G
A
T
T
A
A
A
A
C
C
A
G
A
A
A
A
A
G
A
A
T
G
T
A
T
T
T
A
T
8500 |
var(8451):[C:0.25]
|
var(8452):[A:0.01]
G
G
T
A
G
T
G
A
A
G
C
G
T
G
A
C
A
C
C
C
A
C
C
A
C
C
T
T
A
A
T
T
C
A
A
T
G
A
T
C
A
A
C
A
A
G
A
A
C
A
8550 |
var(8528):[C:0.09]
T
C
A
T
C
A
A
T
C
T
T
G
G
G
G
C
A
A
A
C
T
A
A
A
G
T
C
A
C
A
T
G
C
C
G
C
C
C
G
G
T
A
G
A
A
T
G
G
G
A
8600
G
A
A
G
A
G
C
G
C
A
G
C
A
G
G
A
T
G
T
C
T
A
T
C
G
C
A
T
T
T
C
T
G
C
T
G
A
A
G
T
T
A
C
A
G
A
A
C
C
T
8650
G
A
A
T
C
T
A
A
T
C
A
T
G
A
G
C
C
A
A
T
A
C
A
T
T
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
G
T
G
A
G
G
G
8700
G
C
A
T
T
C
T
A
C
A
C
A
G
T
A
A
C
T
C
T
C
C
T
G
T
G
A
T
C
T
T
C
A
C
A
C
T
G
T
G
T
T
C
A
G
G
T
C
A
T
8750 |
var(8746):[C:0.04]
G
A
A
G
G
T
G
A
A
G
G
G
A
A
G
A
C
A
G
A
G
G
G
C
C
T
T
T
G
T
G
G
G
T
T
T
C
A
G
G
A
C
C
C
T
G
G
A
G
A
8800 |
var(8774):[A:0.01]
A
G
C
G
T
G
A
C
A
A
C
C
G
A
A
T
A
C
G
G
C
A
C
A
T
G
G
C
T
C
A
G
A
A
A
T
G
G
A
T
C
C
T
T
T
G
C
T
A
T
8850 |
var(8818):[T:0.02]
|
var(8849):[G:0.04]
A
A
A
G
G
A
C
A
C
T
A
T
T
G
G
G
G
C
A
T
T
G
G
G
T
A
C
A
T
T
T
T
G
C
A
T
A
G
G
G
C
C
T
G
A
A
G
G
C
T
8900
A
T
T
T
G
G
A
G
T
T
A
T
T
A
T
A
T
C
C
A
T
G
T
T
A
A
T
T
T
C
T
T
G
A
T
T
A
T
G
G
T
T
A
T
A
A
T
G
C
G
8950 |
var(8908):[T:0.02]
|
var(8949):[T:0.11]
AAAATGCCTT TGCATGAAAA ACACATTAAA GTATTGGGGT GTTGGGGTTT
9000
CATGCTGACA ACCTACTTTC ATAGGTTCAG GGAAACATAT TTGTACCGTG
9050
CCTGCAATTC TTCTGTAAAT TTGATGTTTC AAGATAATAA AA
A
C
A
A
A
A
A
G
9100 |
REPEAT
G
A
A
A
C
T
G
A
G
C
C
T
C
A
A
A
A
T
G
T
T
A
C
A
T
A
A
C
C
T
G
A
C
T
G
A
G
T
C
C
A
C
A
T
G
G
G
T
A
A
9150
T
A
A
G
T
G
A
C
A
G
C
T
C
T
G
G
G
T
G
A
A
A
A
C
T
C
A
G
G
T
G
T
G
C
C
T
T
T
C
C
C
C
T
A
A
A
G
T
C
A
9200
C
G
C
C
C
T
G
C
C
C
T
G
C
C
A
A
C
C
A
C
AAGGCCCTGC ACATCTGAGT TGGCCTC
T
GT
9250 |
var(9248):[A:0.01]
T
C
CTGCTCAT CACCTGCAAA ACAGCCCTGC CTCCCCACAG CCAAGTTGCT
9300 |
var(9252):[T:0.01]
GGAGCTGCGC CCCACCTGCC CCCACCCTGC ACTGGCCTGA CTCCCCCATT
9350
CCACACCTGG
C
CCAGCACCC ACCACATGGT GTGGCAGACA GCACTGGGGC
9400 |
var(9361):[T:0.10]
AGCTGAAAGA CTCCATG
C
TA CAAATTGGCA CTGCCCAGCT TCCTGCTTCT
9450 |
var(9418):[T:0.04]
GGGAGTGGGG TCCATTGGCT GAGCTTCCGC TCCCTGGAAG AGCTCCAGAC
9500
TCC
T
CAATG
G
TTTGGGATTT TTCAAACCAA TTCCAAATAA GCCAGGGGA
G
9550 |
var(9504):[A:0.06]
|
var(9510):[T:0.01]
|
var(9550):[T:0.38]
ATTTTCCTGT CTTGGTTCCC ATCATTACCA CCTCCACAGT TGGAGATTCC
9600
CTCCTAATCC AGATGCTC
G
A ACCAGGACCT CAACAACTAG GGCTTCATAT
9650 |
var(9619):[A:0.12]
ATCACTGGGA CACTTAGCAT AATCACCATT GCAGGTTGCC AGACATCACC
9700
CAAAGTGATG TTCTACCAAA GACAGAAACT GCAGCTCTCC C
G
TGACCTTC
9750 |
var(9742):[A:0.05]
CAGGTGCTGC CCTGACTCCT CCAGCTGAAC CTGCTAGGGC AGAGGGAAGT
9800
GGAACGTGCA GCATATTTGC C
G
GCCACTCT GCCCATGTGC CCACCAACTC
9850 |
var(9822):[T:0.12]
A
GCTGCAGGC TCCAG
G
GACA CAGGCTGGTG GGGGGGCCTG GGGCTCATGG
9900 |
var(9851):[G:0.01]
|
var(9866):[A:0.01]
CTGAGCCAGG TCGCAGGACA GACAAGTTGG CCTGGATCAA CCTGACCAAT
9950
CTCAGCTGGA GCAGTGAGTT CTTCATTGTC TGAATCTAAA CCAGGAACCC
10000
AGTGGGGCTT CCTTAGTGCC TGTGTAAGGG CTCTCGGCTT TCACTGCTAA
10050
GGAGCTTGCT AGGGGCAGGG TGGGTGACCT CAGCCAAGGG GGGGATTTCT
10100
CTTCTTACAG A
C
CTGGAGTT CCTCTTTCGC AGGTTCTGTG CTCCC
C
TCAA
10150 |
var(10112):[A:0.02]
|
var(10146):[A:0.17]
GGGTCCTTTG AGATCCTCCA GCCTGAGTGC TCTTGGGGAA ACATGCTGTG
10200
TAAACACTAT GCCCATTTCC TGCCTGGAGC ACAGGTTTTG TGGTAGGGCT
10250
CTCAGGGGTG AGGAGGAAGC CTGGCAGCCC CCA
C
ATCTAT AAATGCTGCG
10300 |
var(10284):[T:0.05]
TCTACCTTAC CCTCTGACTT GGAGGCAGAG ACCCAAGCAG CTGGAGGCTC
10350
TGTGTGTGGG TGAGTTTAGC CCCATCCCCT AGGTGTTCTC CAGCTTGAGG
10400
ATCGCAGGCA GAGAGGACCA GCCCAGCAGC CACAGGCCTG ACCAAAGCCC
10450
AGGCTGGGAA GGAGGGCAAC TCCCCATTTT CCACTGGGAG GTGTTTCACA
10500
GCACAGTCAA CATAGGTGAC CTGCAAAGAT CCTCATGTTT GTTATTTTCT
10550
TTGGCCAGAT CCATCCCTA
C
AGGGTTCAGC AGGGCCTACA GGAGGGGCAG
10600 |
var(10570):[T:0.02]
TGAGAGAACA GACCCCAAAA AGAAAGGGGA CTCCATGACT GACCACCTTG
10650
AGGGGGGCCA GGCTGCGGG
C
CCCGTTCATC TTTTTTCATT CTCAGGTCGC
10700 |
var(10670):[T:0.09]
TGATTTCTTG GAGCCTGAAA AGAAAGTAAC ACAGCAGGGA TGAGGACAGA
10750
TGGTGTGAGT CAGTGAGTGA GTGACCTGAC TAATAGCCTG GGAGGGACAG
10800
GGCAGGTTTT CTGCAGAGCA CGGAAGATTC
A
G
C
T
G
A
A
G
T
C
A
G
A
G
A
G
G
T
G
A
10850 |
REPEAT
A
G
C
C
A
G
T
T
T
C
C
C
A
G
G
G
T
A
A
C
A
T
A
G
T
G
A
G
G
C
A
C
T
G
A
A
A
G
A
A
A
G
G
A
G
A
C
T
G
C
10900
A
C
T
G
G
A
G
C
C
C
A
G
G
T
C
C
C
C
G
G
G
C
T
C
C
C
C
A
G
A
G
C
T
C
C
T
T
A
C
T
C
T
T
C
C
T
C
C
T
C
10950
CTCAGCAGCC T
G
GAGACCCC ACAACCTCCA GCCGGAGGCC TGAAGCATGA
11000 |
var(10962):[T:0.14]
GGCCATGCCA GGTGCCAGGT GATGCTGGGA ATTTTCCCGG G
A
GCTTCGGG
11050 |
var(11042):[T:0.10]
TCTTCCCAGC ACTCTGGTCT CGCCCGCCCT GCCTCTCGGG CTCTGCCCAG
11100
CTTCCTGAGT CCTGACAGAG CACAGTGGGG GAGATGTTGG CAGAGGTGGC
11150
AGATGGGCTC ACGGCCATCC CTCCTGCAGG AGCAGCGACT GGACCCAGAG
11200
CC
A
T
G
T
G
G
C
T
G
T
G
C
C
C
T
C
T
G
G
C
C
C
T
C
A
A
C
C
T
C
A
T
C
T
T
G
A
T
G
G
C
A
G
C
C
T
C
T
11250 | Exon 1 |
var(11228):[C:0.03]
M W L C P L A L N L I L M A A S 16
G
G
T
G
C
T
G
T
G
T
G
C
G
A
A
G
T
G
A
A
G
G
A
C
G
T
T
T
G
T
G
T
T
G
G
A
A
G
C
C
C
T
G
G
T
A
T
C
C
C
11300 |
var(11258):[C:0.05]
G A V C E V K D V C V G S P G I P 33
C
G
G
C
A
C
T
C
C
T
G
G
A
T
C
C
C
A
C
G
G
C
C
T
G
C
C
A
G
G
C
A
G
G
G
A
C
G
G
G
A
G
A
G
A
T
G
G
T
G
11350 |
var(11319):[T:0.10]
|
var(11350):[C:0.43]
G T P G S H G L P G R D G R D G 49
T
C
A
A
A
G
G
A
G
A
C
C
C
T
G
G
C
C
C
T
C
C
A
G
GTACTG TGCTGCAGAC CCCACCCTCA
11400
V K G D P G P P 57
GCTGAGGGAC ACAGACCCCT TTTCAGGAGG CCCATCTGTC CAGGCCCCTA
11450
GGCTGTGGGC CATAGTGAGC TGGGGGCTAT AGTAAGCTGG GTGGGACTTC
11500
AGTCTGCAGG GCTGGTGGGT TCCTGGGGCC CTTATGATGG CGCA
T
CCTGG
11550 |
var(11545):[A:0.01]
AGAGTCTGTC CTCATAGTGC CCA
C
GGAGTG ATAGAGTGAT AGCTGAGCCA
11600 |
var(11574):[T:0.10]
GCCCTGGTGA TAATGGGCAT CGAGTCTCAC TAGCTCCAAC CAGTTGTGGG
11650
TGACAGATCC TACACATCCA TGTCTCTTTT CTCTGCAG
G
C
C
C
C
A
T
G
G
G
T
C
11700 | Exon 2
G P M G 61
C
A
C
C
T
G
G
A
G
A
A
A
T
G
C
C
A
T
G
T
C
C
T
C
C
T
G
G
A
A
A
T
G
A
T
G
G
G
C
T
G
C
C
T
G
G
A
G
C
C
11750 |
var(11702):[G:0.14]
P P G E M P C P P G N D G L P G A 78
C
C
T
G
G
T
A
T
C
C
C
T
G
G
A
G
A
G
T
G
T
G
G
A
G
A
G
A
A
G
G
G
G
G
A
G
C
C
T
G
G
C
G
A
G
A
G
G
G
G
11800
P G I P G E C G E K G E P G E R G 95
C
C
C
T
C
C
A
G
GT GAGCAGGGTG GGGCAGGTGG GCAGTGGAAA CATGGGCACA
11850
P P 97
GC
G
ACCCTGA AGTCAGTTAC ACGGGGATGA TGGGGATCAG ACAAACCCTA
11900 |
var(11853):[:0.14]
CAGGTTCCCC AAGGGCATTT GGCTCAACCT AAGTAAGAGA GGATAAGCTT
11950
GAGGGAGAAA GCTGAGGTGT CTGGGGAGTG TGGTCACAAT TCAGGGAAAG
12000
GCAGGTGTGG GAAGTCCTCC GTGCCTCATG ACCACCGATG GGGACACACT
12050
GAGTCAGGTG TGGGA
T
GAGG GACAGCACTG GGAGGCAGGG GAGGCATGTC
12100 |
var(12066):[C:0.15]
CTGGGATGGA GGCCCTGGGG GC
T
GTCTGAA GGGTGAATG
C
G
GACGAGGCA
12150 |
var(12123):[A:0.27]
|
var(12140):[A:0.01]
|
var(12141):[A:0.05]
TCCAGACAGA
C
GGTGTGATC AGGAGCCCCA CAGACAGAGG GGA
G
CTTTGA
12200 |
var(12161):[T:0.01]
|
var(12194):[A:0.40]
AGCTCAGAGC GGTAAGCAAG TCCATCAGGG CAGTGCAGAG AGCATCATGC
12250
TTGCCCTTGG TGGAGGGTGC GGGAGAGGGA C
T
T
G
CCCCAC AGAGGCGGGC
12300 |
var(12282):[:0.57]
AGACAGA
G
CC CCTCGAGGGA CAGAGCAG
A
A AA
T
AGGACAA GGGGTGGGGG
12350 |
var(12308):[A:0.26]
|
var(12329):[G:0.16]
|
var(12333):[G:0.17]
TCTCAGCAGG GGCAAGGCTT CACTAAAGAA TAGGGGACCA CGGGGTGTGG
12400
AGACACACTG GAATCTTGTG GACCCTCTGA GCCTAGGGTC TGGGTGGCGC
12450
CTAACAGCAA TGAAAGGGCA GAGTTCCAGG ATTGCAGATG GCAAAACACC
12500
TGCGTGGCAG CAAGTGGGAG TCTTCACTGG CCTGCCCCTC CTTCTGTGTG
12550
GGGCACTCTC CACAG
G
G
C
T
T
C
C
A
G
C
T
C
A
T
C
T
A
G
A
T
G
A
G
G
A
G
C
T
C
C
A
A
G
C
C
12600 | Exon 3
G L P A H L D E E L Q A 109
A
C
A
C
T
C
C
A
C
G
A
C
T
T
T
A
G
A
C
A
T
C
A
A
A
T
C
C
T
G
C
A
G
A
C
A
A
G
G
G
G
A
G
GTAAGGG
12650
T L H D F R H Q I L Q T R G 123
GACCCCCTGG GCCTCA
C
GGG GTAGGAGTTT CCCACAAATT CC
C
CTCATTC
12700 |
var(12667):[T:0.01]
|
var(12693):[T:0.02]
TCAGCACCAG CTTCTAGAAC ATAGAGATTA CAAATAGGCA TGCACATGCA
12750
GGTCTTGGGG AAAGGAATGA CGCTTGCTTT TCTGATGTCT TTGAATGGCC
12800
CA
C
AGGAGAC AGAAGCAGAC ACAATTCACT CCCCATTTCA TAG
G
A
A
A
G
C
A
12850 |
var(12803):[G:0.45]
|
REPEAT
A
G
T
T
C
T
C
C
A
C
C
T
G
C
C
T
T
G
C
T
T
T
C
C
A
C
T
G
A
A
T
T
C
C
A
G
G
A
A
A
T
T
G
C
A
C
C
A
T
T
12900 |
var(12876):[T:0.01]
T
C
T
G
G
C
A
A
T
A
A
G
T
A
A
T
T
G
T
T
A
C
T
T
A
G
G
T
G
A
A
T
G
A
A
T
AAAT GGAGGAGAGT
12950
CTAAAAGTGA ATT
T
AGAAAA CTGCAATTGG AAGAGGAAGA GAAGACACAG
13000 |
var(12964):[C:0.05]
AGAGAGGCAG AGATGGAGAG ACTGGGGAGA ATCTGGTAGC AGAGACCCCA
13050
GGTGAGGGAG GT
G
GCTTAGA GACAAAGTGG TCAGTGGCCT GACCCGGACT
13100 |
var(13063):[A:0.02]
CCTCTGCTCT CAG
C
C
C
T
C
A
G
T
C
T
G
C
A
G
G
G
C
T
C
C
A
T
A
A
T
G
A
C
A
G
T
A
G
G
A
G
A
13150 | Exon 4 |
var(13142):[G:0.04]
A L S L Q G S I M T V G E 136
G
A
A
G
G
T
C
T
T
C
T
C
C
A
G
C
A
A
T
G
G
G
C
A
G
T
C
C
A
T
C
A
C
T
T
T
T
G
A
T
G
C
C
A
T
T
C
A
G
G
13200
K V F S S N G Q S I T F D A I Q 152
A
G
G
C
A
T
G
T
G
C
C
A
G
A
G
C
A
G
G
C
G
G
C
C
G
C
A
T
T
G
C
T
G
T
C
C
C
A
A
G
G
A
A
T
C
C
A
G
A
G
13250
E A C A R A G G R I A V P R N P E 169
G
A
A
A
A
T
G
A
G
G
C
C
A
T
T
G
C
A
A
G
C
T
T
C
G
T
G
A
A
G
A
A
G
T
A
C
A
A
C
A
C
A
T
A
T
G
C
C
T
A
13300 |
var(13295):[C:0.03]
E N E A I A S F V K K Y N T Y A Y 186
T
G
T
A
G
G
C
C
T
G
A
C
T
G
A
G
G
G
T
C
C
C
A
G
C
C
C
T
G
G
A
G
A
C
T
T
C
C
G
C
T
A
C
T
C
A
G
A
C
G
13350 |
var(13349):[T:0.01]
V G L T E G P S P G D F R Y S D 202
G
G
A
C
C
C
C
T
G
T
A
A
A
C
T
A
C
A
C
C
A
A
C
T
G
G
T
A
C
C
G
A
G
G
G
G
A
G
C
C
C
G
C
A
G
G
T
C
G
G
13400 |
var(13398):[T:0.07]
G T P V N Y T N W Y R G E P A G R 219
G
G
A
A
A
A
G
A
G
C
A
G
T
G
T
G
T
G
G
A
G
A
T
G
T
A
C
A
C
A
G
A
T
G
G
G
C
A
G
T
G
G
A
A
T
G
A
C
A
G
13450
G K E Q C V E M Y T D G Q W N D R 236
G
A
A
C
T
G
C
C
T
G
T
A
C
T
C
C
C
G
A
C
T
G
A
C
C
A
T
C
T
G
T
G
A
G
T
T
C
T
G
A
GAGGCATTTA
13500 |
var(13467):[T:0.01]
N C L Y S R L T I C E F 248
GGCCATGGGA CAGGGAGGAC GCT
C
TCTGGC CTTCGGCCTC CATCCTGAGG
13550 |
var(13524):[T:0.01]
CTCCACTTGG TCTGTGAGAT GCTAGAACTC CCTTTCAACA GAATTCACTT
13600
GTGGCTATTG GGACTGGAGG CACCCTTAGC CACTTCATTC CTCTGATGGG
13650
CCCT
G
ACTCT TCCCCATAAT CACTGACCAG CCTTGACACT CCCCTTGCAA
13700 |
var(13655):[A:0.10]
AC
T
C
TCCCAG CACTGCACCC CAGGCAGCCA CTCTTAGC
C
T TGGCCTTCGA
13750 |
var(13703):[C:0.17]
|
var(13704):[A:0.17]
|
var(13739):[A:0.17]
CATGAGATGG AGCCCTCCTT ATTCCC
C
A
T
C
T
G
G
T
C
C
A
G
T
T
C
C
T
T
C
A
C
T
T
A
13800 |
REPEAT
C
A
G
A
T
G
G
C
A
G
C
A
G
T
G
A
G
G
T
C
T
T
G
G
G
G
T
A
G
A
A
G
G
A
C
C
C
T
C
C
A
A
A
G
T
C
A
C
A
C
13850
A
AAGTGCCTG CCTCCTGGTC CCCTCAGCTC T
G
C
CTCTGC
A
G
C
C
C
A
C
T
G
C
C
13900 |
var(13882):[C:0.45]
|
var(13883):[T:0.45]
|
var(13890):[G:0.36]
|
var(13891):[A:0.45]
|
var(13892):[:0.45]
T
G
CCCAGTGC CATCAGGATG AGCAATCCTG GCCAAGCATA ATGACAGAGA
13950
GAGGCAGA
C
T TCGGGGAAGC CCTGACTGTG CAGAGCTAAG GACACAGTGG
14000 |
var(13959):[T:0.03]
AGATTCTCTG GCACTCTGAG GTCTCTGTGG CAGGCCTGGT CAGGCTCTCC
14050
ATGAGGTTAG AAGGCCAGGT AGTGTTCCAG CAGGGTGG
T
G GCCAAGCCAA
14100 |
var(14089):[C:0.05]
CCCCATGATT GATGTGTAC
G
ATTCACTCCT TTGAGTCTTT GAATGGCAAC
14150 |
var(14120):[C:0.02]
TCAGCCCCCT GACCTGAAGA CAGCCAGCCT AGGCCTCTAG GGTGACCTAG
14200
AGCCGCCTTC AGATGTGACC CGA
G
TAACTT TCAACTGATG AACAAATCTG
14250 |
var(14224):[A:0.06]
CACCCTACTT CAGATTTCAG TGGGCATTCA CA
T
CACCC
C
C CACACCACTG
14300 |
var(14283):[C:0.40]
|
var(14289):[A:0.01]
GCTCTGCTTT CTCCTTTCAT TAATCCATTC ACCCAGATAT TTCATTAAAA
14350
TTATCACGTG CCAGGTCTTA GGATATGTCG TGGGGTGG
G
C AAGGTAATCA
14400 |
var(14389):[A:0.01]
GTGACAGTTG AAGATTTTTT TTTCCCAGAG CTTATGTCTT CATCTGTGAA
14450
ATGGGAATAA GATACTTGTT GCTGTCACAG TTATTACCAT CCCCCCAGCT
14500
ACCAAAATTA CTACCAGA
A
C TGTTACTATA C
A
CAGAGGC
T
A
T
T
G
A
C
T
G
A
G
14550 |
var(14519):[G:0.02]
|
var(14532):[G:0.01]
|
var(14540):[C:0.01]
|
REPEAT
C
A
C
C
T
A
T
C
A
T
T
T
G
C
C
A
A
G
A
A
C
C
T
T
G
A
C
A
A
G
C
A
C
T
T
C
T
A
A
T
A
C
A
G
C
A
T
A
T
T
14600
A
T
G
T
A
C
T
A
T
T
C
A
A
T
C
T
T
T
A
C
A
C
A
A
T
G
T
C
A
C
G
G
G
A
C
C
A
G
T
A
T
T
G
T
T
T
C
C
T
C
14650 |
var(14609):[C:0.07]
|
var(14618):[C:0.47]
A
T
T
T
T
T
T
A
T
A
A
G
G
A
C
A
C
T
G
A
A
G
C
T
T
G
G
A
G
G
A
G
T
T
A
A
A
T
G
T
T
T
T
G
A
G
T
A
T
T
14700
A
T
T
C
C
A
G
A
G
A
G
C
A
A
G
T
G
G
C
A
G
A
G
G
C
T
G
G
A
T
C
C
A
A
A
C
C
C
A
T
C
T
T
C
C
T
G
G
A
C
14750
C
T
G
A
A
G
C
T
T
A
T
G
C
T
T
C
C
A
G
C
C
A
C
CCCACTC CTGAGCTGAA TAAAGATGAT
14800
TTAAGCTTAA TAAATCGTGA ATGTGTTCAC ATGAGTTTCC ATAGCTTTGG
14850
TTCCAAGAAA TATCACATTT CTGTATTTTT GTAAATCAAA TGAACTCTGA
14900
CTCTGAGCCC CCACTTGCCT GAAGATTGGA AAATTCAATC TCAGGATGT
G
14950 |
var(14950):[A:0.05]
CTTTCTTTGT TTGGTAGGAG GAGCCACCTC CTCTCCTCAC TATGATGCTG
15000
CAGAGGGATG GGGAGCTACA GCCACCATTT GGAAGAACAT ACGGGCTTCC
15050
TGAGTCCACA TGGTCCATTT GTGGGTGGGA ATACCATGTC TTCTGTCCCC
15100
T
A
CTCAGCCA CCTGAATGAT TTCTGCAGCC CAGCAGTGAT GGTGGCACTC
15150 |
var(15102):[C:0.01]
AGGGCTCAGT CCCAGGCCTT
A
GTGAGCCAT CCTAGTCTCA GGTCTGCATG
15200 |
var(15171):[G:0.01]
GAATGGGACC ACACTCTCAT GACCCAGGGC TGCGCAGGAA TGAGACAATG
15250
TCTCCAATTG CTTGAGGAGG CAGCTACATA TGTGTCCCAC CTCCCACTTC
15300
TCCCCCTATA ACACCTGTGA ACACTCTTTC TCAGTGCATT TATTGCTTTT
15350
CTTGGGC
G
GA AGGAAGCTCA GAAAACCAAT GAGAATAAGA GGAAATTTTT
15400 |
var(15358):[A:0.01]
CTCAGTCTTT TATGAGTGAT AATTTTTAAT CTGATCACCA TTCCATATGT
15450
GCTTAGGACC CAGCACAGAA ATTATTGAGC CTTCTTCAAA ATTAAGAAAA
15500
AAAGCAAGTA GAAGCATGTA
C
A
G
A
T
G
T
A
T
C
T
C
G
A
C
T
T
A
T
G
A
T
G
G
G
G
T
G
A
C
15550 |
REPEAT
|
var(15535):[:0.13]
A
T
C
C
C
A
A
T
A
A
T
C
A
C
A
T
T
G
C
A
G
G
A
T
G
A
G
A
A
T
A
T
A
T
T
A
A
G
T
G
G
A
A
A
A
T
G
C
A
T
15600 |
var(15561):[A:0.42]
T
T
A
A
T
A
C
A
C
C
T
A
A
C
C
T
A
C
C
A
A
A
C
A
T
C
A
T
A
G
C
T
G
A
G
C
C
T
G
G
A
G
T
A
A
C
T
T
A
A
15650
A
C
A
T
G
C
C
C
A
G
A
A
A
A
C
T
T
A
T
G
T
T
A
G
C
C
T
G
C
A
G
T
T
G
G
G
C
A
A
A
A
T
C
A
T
C
T
A
A
C
15700
A
C
A
A
G
G
C
T
G
A
T
T
T
T
A
T
A
A
T
G
A
G
G
T
G
T
T
G
A
C
T
G
T
C
T
C
A
T
G
A
A
A
T
T
T
A
T
G
G
A
15750
A
T
G
C
T
G
G
A
C
T
G
A
A
A
C
T
G
A
A
T
G
A
A
T
A
A
T
T
C
A
G
T
T
A
T
A
T
G
T
G
T
A
C
T
T
G
A
A
G
T
15800
A
T
G
G
C
T
T
C
T
A
C
T
G
G
A
T
T
T
G
C
A
T
T
G
C
T
T
T
T
A
A
G
T
C
A
T
T
G
C
A
A
A
G
T
G
G
A
A
A
A
15850
A
T
T
G
T
A
A
G
T
C
G
G
A
C
A
G
T
T
G
T
A
A
A
T
C
C
A
G
G
A
C
A
G
T
C
T
ACAT TCCCAATTAT
15900
ATAGATAAAT ACTTTAAGCC TCTGAAAA
T
T
T
G
C
A
T
C
T
A
T
T
G
A
G
A
T
A
A
T
C
A
15950 |
REPEAT
T
G
T
G
G
T
T
T
T
T
G
T
C
T
T
T
A
G
T
T
C
T
G
T
T
T
A
T
G
T
G
A
T
G
A
A
T
C
A
C
T
T
T
T
A
T
T
G
A
T
16000
T
T
G
C
G
T
A
T
G
T
G
G
A
A
C
C
A
A
G
C
T
T
G
C
A
T
C
C
T
A
G
G
G
A
T
G
A
A
G
T
T
T
A
C
T
T
G
A
T
T
16050
G
T
G
G
T
G
G
A
T
A
A
G
C
T
T
T
T
T
G
A
T
G
T
G
T
C
A
C
T
T
G
A
T
T
C
G
G
T
T
T
G
C
C
A
G
T
A
T
T
T
16100
T
G
T
T
A
A
G
G
A
T
T
T
T
T
G
C
A
T
C
A
A
T
G
T
T
C
A
T
C
A
A
G
A
A
T
A
T
T
G
G
C
C
T
G
A
A
G
T
T
T
16150
T
C
T
T
T
T
T
T
G
T
T
G
T
A
T
C
T
G
C
C
A
G
G
T
T
T
T
G
G
T
A
T
C
A
A
A
A
T
G
A
T
G
C
T
A
G
C
C
T
T
16200
A
C
A
G
A
A
T
G
A
G
T
T
A
A
G
G
A
G
G
A
G
T
T
G
C
T
T
C
T
T
T
T
C
A
A
T
T
T
T
T
T
G
G
A
A
T
A
G
T
T
16250
T
T
A
G
T
A
G
G
A
A
T
G
G
T
A
C
C
A
A
C
T
C
T
T
C
T
T
T
G
T
A
C
C
T
C
T
G
G
T
A
G
A
A
T
T
A
A
G
C
T
16300 |
var(16260):[G:0.01]
G
T
G
A
C
T
C
C
A
T
C
T
G
G
T
C
C
T
G
G
G
A
T
T
T
T
T
T
T
G
G
T
G
G
G
C
A
G
G
C
T
A
T
T
T
A
T
T
A
C
16350 |
var(16333):[C:0.07]
T
G
C
C
T
C
A
A
C
T
T
C
A
G
A
A
C
T
C
A
T
T
A
T
T
T
G
T
C
T
A
T
T
C
A
G
G
G
A
T
T
C
C
A
T
T
T
C
T
T
16400
C
C
T
G
A
T
T
C
T
T
T
C
T
T
G
G
G
A
G
G
G
C
G
T
A
T
A
T
G
T
C
C
A
G
G
G
C
A
T
A
T
T
T
A
T
C
C
A
T
T
16450 |
var(16430):[C:0.02]
|
var(16436):[C:0.09]
|
var(16438):[G:0.08]
T
C
T
T
C
T
A
G
A
T
T
T
T
C
T
A
G
T
T
T
A
T
G
T
G
C
A
C
A
G
A
G
G
T
G
T
T
T
A
T
A
G
T
A
T
T
C
T
C
T
16500
G
A
T
G
G
T
T
G
T
T
T
G
T
A
T
T
T
C
G
T
G
G
G
G
T
C
A
G
T
G
G
T
G
A
T
A
T
C
C
C
C
C
T
T
A
T
C
A
T
T
16550
T
C
T
G
A
T
T
G
T
G
T
C
T
A
T
T
T
G
A
A
T
C
T
T
C
T
C
T
T
T
T
C
T
T
C
T
T
T
A
T
T
A
G
T
C
T
A
G
C
T
16600
A
G
T
G
A
T
C
T
A
T
C
T
A
T
T
T
T
A
T
T
A
A
T
T
T
T
T
T
C
A
A
A
A
A
T
C
C
A
C
C
T
C
C
A
G
G
A
T
T
T
16650 |
var(16622):[T:0.33]
G
T
T
G
A
T
A
T
T
T
T
T
A
A
G
G
T
T
T
T
T
C
G
T
G
T
C
T
C
T
G
T
G
T
C
C
T
T
C
G
A
T
T
C
T
G
C
T
C
T
16700 |
var(16690):[A:0.01]
G
A
T
C
T
T
G
G
T
T
A
T
T
T
C
T
T
T
T
C
T
T
C
T
G
C
T
A
G
C
T
T
T
G
G
G
G
T
T
T
A
T
T
T
G
C
T
C
T
T
16750
A
G
T
T
C
T
C
T
A
G
T
T
C
T
T
T
T
A
G
T
T
G
T
G
A
T
A
T
T
A
G
G
T
T
A
T
T
A
A
C
T
T
T
C
T
A
A
C
T
T
16800 |
var(16752):[T:0.02]
T
T
T
G
A
T
A
T
G
G
G
C
A
T
T
T
A
G
T
G
C
T
A
T
A
A
A
T
T
T
C
C
C
T
C
T
T
A
A
C
A
T
T
G
C
T
T
T
A
G
16850
C
T
G
T
G
T
C
C
C
A
G
G
G
A
T
T
C
T
G
G
C
A
T
G
T
T
G
T
G
T
C
T
T
T
G
T
T
C
T
C
A
T
T
A
G
T
T
T
C
A
16900
A
A
G
A
A
G
T
T
C
T
T
G
A
T
G
T
T
T
G
C
C
T
T
A
A
T
T
T
C
A
T
T
G
T
T
T
A
C
C
C
A
A
G
A
G
T
C
A
T
A
16950 |
var(16917):[C:0.08]
C
A
A
G
A
G
C
A
G
G
T
T
T
T
T
C
A
A
T
T
T
C
T
A
T
G
T
A
G
T
T
G
T
G
T
G
G
T
T
T
T
G
A
G
T
G
A
A
C
T
17000
T
C
T
T
C
A
T
C
T
C
G
A
G
T
T
C
T
A
A
T
T
T
G
A
T
T
G
C
A
T
T
A
T
T
G
T
C
T
G
A
G
A
G
A
C
T
G
T
T
T
17050
G
T
T
A
T
T
A
T
G
T
C
A
G
T
T
C
T
T
T
T
T
C
A
T
T
T
G
T
T
G
A
G
T
G
T
T
T
T
A
C
T
T
C
C
A
A
T
T
A
T
17100
G
T
G
A
T
C
A
A
T
T
T
T
A
G
A
G
T
A
A
G
T
A
G
G
A
T
G
T
G
T
C
A
A
T
G
A
G
A
A
G
A
A
T
G
T
A
T
A
T
T
17150
C
T
G
T
T
G
T
T
T
T
G
G
G
G
T
G
G
A
G
A
G
T
T
C
T
G
T
A
G
A
C
A
T
C
T
A
A
C
A
G
G
T
C
C
A
C
T
T
G
A
17200
T
C
C
A
G
A
G
T
T
G
A
G
T
T
C
A
G
A
T
C
C
T
G
A
A
T
A
A
C
T
T
T
G
T
T
A
A
T
T
T
T
C
T
G
T
C
T
C
A
A
17250
T
T
A
T
C
T
A
T
C
T
A
A
T
A
T
T
G
T
C
A
A
T
G
G
G
G
T
G
T
T
A
A
A
G
T
C
T
C
C
C
A
C
T
A
T
T
A
T
G
T
17300 |
var(17252):[G:0.08]
G
T
G
G
G
A
G
T
C
T
A
A
G
T
C
T
C
T
T
T
G
A
A
T
G
T
C
T
C
C
A
A
G
A
A
C
T
T
G
C
T
T
T
A
T
G
A
A
T
C
17350
T
G
A
G
T
G
C
T
C
C
T
G
T
A
T
T
G
G
G
C
A
C
A
T
A
T
A
T
G
T
T
T
A
G
A
A
G
A
G
T
T
A
T
C
T
C
T
T
C
T
17400 |
var(17356):[T:0.09]
T
G
T
T
G
A
A
T
T
G
A
A
C
T
C
T
T
T
A
C
C
A
C
T
A
T
G
T
A
A
G
G
C
T
C
T
T
C
T
T
T
G
T
C
T
T
T
T
T
T
17450 |
var(17429):[G:0.02]
T
A
T
C
T
T
T
G
T
A
G
G
T
T
T
A
A
A
G
T
C
T
G
T
T
T
T
G
T
C
A
G
A
A
A
C
T
A
G
G
A
T
T
G
C
A
G
C
C
C
17500
C
T
G
C
T
T
T
T
T
T
C
T
G
T
T
T
T
T
C
A
T
T
T
G
C
T
T
G
G
T
A
A
A
T
T
T
T
C
C
T
C
C
A
T
C
C
C
T
T
T
17550
A
T
T
T
T
G
A
G
C
C
T
A
T
G
T
G
T
G
T
C
T
T
T
G
C
A
T
A
T
G
A
A
A
T
G
G
G
T
C
T
C
T
T
T
A
A
G
A
C
A
17600
A
C
A
T
A
C
T
G
A
T
G
G
G
T
C
T
T
A
A
T
T
C
T
T
T
A
T
C
C
A
G
C
T
T
G
C
C
A
T
T
C
T
G
T
G
T
C
T
T
T
17650
T
A
A
T
T
A
G
G
G
T
C
A
T
T
T
A
C
T
C
C
A
T
T
T
A
C
A
T
T
T
A
A
G
A
A
T
A
G
T
A
T
T
G
A
T
A
T
G
T
G
17700 |
var(17699):[G:0.10]
T
G
G
A
T
T
T
G
A
T
C
C
T
G
T
C
A
T
G
A
T
G
A
T
G
C
C
A
G
C
T
G
C
T
T
A
T
T
T
T
G
C
A
G
A
C
T
T
G
T
17750
T
T
A
T
G
T
G
G
T
T
G
C
T
T
C
A
G
T
G
T
C
A
C
T
G
C
T
C
T
G
T
G
T
A
C
T
T
T
G
G
T
G
T
G
T
T
T
T
T
G
17800
T
A
G
T
G
G
C
T
G
G
T
A
A
C
A
G
T
T
T
T
C
C
T
T
T
C
C
A
T
A
T
T
T
A
G
T
G
T
T
T
C
C
T
T
C
A
G
G
A
G
17850 |
var(17814):[G:0.01]
C
T
C
T
T
G
C
A
A
A
G
C
A
G
A
C
C
T
G
G
T
C
A
T
G
A
T
G
A
A
T
T
C
A
C
T
C
A
G
C
A
T
T
T
T
C
T
T
G
T
17900 |
var(17900):[C:0.15]
C
T
G
A
A
A
A
G
G
A
T
T
T
T
A
T
T
T
C
T
C
C
T
T
C
G
C
T
T
A
T
G
A
A
G
C
T
T
A
G
T
T
T
G
G
C
C
A
G
A
17950
T
A
T
G
A
A
A
T
T
C
T
G
G
G
T
T
G
G
A
A
A
T
T
C
T
T
T
T
T
T
T
A
A
A
G
G
A
A
G
T
T
G
A
C
T
G
T
T
G
G
18000
C
C
C
C
C
A
A
T
C
T
T
T
T
C
T
A
A
C
C
T
G
T
G
G
T
G
T
T
T
C
C
A
C
T
A
A
G
A
G
A
T
T
C
A
C
A
G
T
T
A
18050 |
var(18021):[T:0.01]
G
T
C
T
G
A
T
G
G
A
C
T
T
C
C
C
T
T
G
G
T
A
G
G
T
G
A
C
C
T
G
G
C
C
T
T
T
G
T
C
T
C
A
G
G
C
T
G
C
C
18100
C
T
T
A
A
C
A
T
T
T
T
T
T
C
T
T
T
C
A
T
T
A
T
G
A
C
C
T
T
G
G
A
G
A
A
T
C
T
G
A
T
T
A
T
T
T
T
A
T
C
18150
T
T
G
G
A
A
A
T
G
A
T
C
T
T
C
T
C
A
T
G
G
A
G
T
A
T
C
T
T
A
C
T
G
G
G
G
T
T
C
T
C
T
G
C
A
T
T
T
C
C
18200
T
T
A
A
T
T
T
G
A
A
T
A
T
T
A
G
C
T
T
G
T
C
T
T
G
C
T
T
G
G
T
T
G
G
G
G
A
G
T
T
T
C
T
C
C
T
G
G
A
T
18250
G
A
T
A
T
C
C
T
G
A
A
G
T
A
T
G
T
T
T
T
C
C
A
A
C
T
T
G
G
T
T
C
C
A
T
T
T
T
C
C
C
C
A
T
C
A
C
T
T
T
18300
C
A
G
A
T
A
C
C
C
C
A
A
T
C
A
G
T
G
A
T
A
G
A
T
T
C
A
G
T
C
T
C
T
T
T
A
C
A
T
A
A
T
T
C
C
A
T
A
T
T
18350
T
C
T
T
G
T
A
G
G
T
T
T
T
G
T
T
C
A
T
T
T
C
T
T
T
T
C
A
T
T
C
T
T
T
T
G
T
C
T
C
T
A
T
T
T
T
T
G
T
C
18400 |
var(18364):[C:0.01]
T
G
C
C
T
G
T
C
T
T
A
A
T
T
C
A
G
A
A
A
G
C
A
A
G
T
T
T
T
C
C
A
G
T
T
C
T
G
A
G
A
T
T
C
T
T
T
C
C
T
18450
C
C
A
C
T
T
G
G
T
C
T
A
C
T
C
T
G
C
T
A
T
T
A
A
T
A
C
T
T
G
T
A
A
T
T
G
C
A
C
T
G
T
G
A
A
G
T
T
C
T
18500
T
G
C
A
G
T
C
T
G
T
T
T
T
T
C
A
G
C
T
C
T
A
A
C
A
G
G
T
T
G
G
T
T
A
T
G
T
T
C
C
T
C
T
C
A
A
A
A
C
T
18550
G
G
C
T
G
C
T
T
T
G
G
C
T
G
T
C
A
G
T
T
T
C
C
A
T
A
T
G
A
T
T
T
T
A
T
C
A
A
G
A
T
T
C
T
T
A
G
C
T
T
18600
C
T
T
T
G
C
A
T
T
G
G
A
T
T
G
C
A
A
C
A
T
G
C
T
C
C
T
T
T
A
G
C
T
C
T
G
T
G
A
A
G
T
T
T
G
T
T
A
T
T
18650
A
C
C
C
A
C
C
T
T
T
T
G
A
G
G
C
C
T
A
C
T
T
C
T
G
T
C
A
T
T
C
A
G
A
C
A
T
C
T
C
A
G
C
C
T
C
A
G
C
C
18700
C
A
G
T
T
C
T
G
A
G
C
C
C
T
T
G
C
T
G
G
G
A
G
G
T
G
T
T
G
C
A
G
T
C
A
T
T
T
G
G
A
G
A
A
A
A
A
G
G
G
18750
G
C
A
C
T
C
T
G
G
C
T
T
T
T
T
G
A
G
T
T
T
T
C
A
G
C
A
T
T
T
T
T
G
C
A
T
T
G
A
T
T
C
T
T
T
C
T
A
A
T
18800
C
T
T
T
G
T
T
G
G
C
T
T
A
C
C
T
A
C
C
T
T
T
G
A
T
C
T
T
T
A
A
G
G
T
T
A
C
T
G
A
C
C
T
T
T
G
G
A
T
G
18850
G
G
GTTTTTGT TGTTTTTCTT TGTTGTTGTT GTTGTT
G
T
T
T
T
C
C
G
T
C
T
A
T
T
18900 |
var(18887):[:0.01]
|
REPEAT
|
var(18894):[A:0.17]
T
G
T
A
T
T
T
C
T
T
T
T
A
A
C
A
G
T
C
T
T
C
C
C
A
C
C
C
T
T
C
C
A
T
A
G
G
G
C
T
G
C
T
G
T
G
G
T
T
T
18950
G
C
T
G
G
G
A
G
G
C
T
G
C
T
C
C
A
G
A
C
C
C
T
A
G
T
T
G
C
C
T
C
A
G
T
T
C
T
T
C
C
C
A
T
A
C
C
T
G
G
19000
A
G
G
T
A
T
C
A
C
C
A
G
T
G
A
A
G
G
TG
G
T
C
C
C
A
G
G
G
A
G
A
G
A
T
C
A
G
A
G
C
T
C
T
G
T
C
C
G
T
19050 |
REPEAT
A
A
T
A
T
G
T
G
C
C
A
G
T
G
G
G
A
A
T
G
G
C
T
G
G
A
A
A
G
C
C
T
G
G
C
T
G
G
G
A
G
G
T
C
C
C
A
C
T
A
19100 |
var(19078):[G:0.43]
A
G
T
G
A
G
G
A
G
A
A
A
T
G
G
A
T
C
A
G
G
T
C
C
C
T
G
C
T
A
A
A
A
G
A
A
G
C
A
G
T
C
T
G
G
C
C
A
C
C
19150
A
T
C
T
G
T
C
A
A
A
G
C
A
A
C
T
A
C
A
T
T
G
T
G
C
T
T
C
T
G
C
G
G
G
G
A
T
T
C
T
T
T
C
T
T
G
T
C
T
G
19200
G
A
C
T
G
T
G
T
G
G
A
C
T
T
T
C
C
A
A
A
G
C
C
C
A
T
A
G
A
C
T
G
A
A
A
G
G
G
C
T
G
A
G
T
C
A
A
C
C
C
19250
T
C
C
T
C
C
C
T
G
G
G
G
C
T
C
C
A
T
T
C
T
G
T
C
T
C
A
G
G
C
A
G
G
C
T
C
C
A
T
C
C
T
G
T
T
A
C
T
G
A
19300
T
G
G
C
A
A
C
C
T
G
G
A
A
T
T
C
C
A
A
G
C
C
A
G
T
G
G
G
T
A
T
T
A
T
C
T
C
G
C
G
A
G
G
T
A
C
C
A
T
G
19350
G
A
A
G
T
G
G
A
G
C
C
C
A
T
G
G
A
A
T
G
A
G
G
C
T
G
C
T
C
A
G
G
C
T
C
C
C
T
G
G
A
T
T
T
T
A
C
C
C
C
19400
C
T
T
C
C
T
A
G
G
G
G
T
A
T
G
T
G
T
G
G
A
C
C
T
C
C
C
A
C
C
T
T
T
G
T
A
C
C
T
C
T
G
A
G
T
T
G
C
A
G
19450
A
C
A
C
A
G
T
T
T
T
T
G
G
G
G
A
T
C
C
C
G
G
G
G
C
T
A
G
G
G
C
A
T
A
T
A
A
A
A
C
T
C
C
T
A
A
G
T
C
T
19500
C
T
G
T
G
T
G
T
G
C
A
T
G
A
G
T
A
G
C
T
G
C
T
C
T
G
C
C
A
A
G
A
C
T
G
C
A
C
A
C
A
G
C
T
C
T
G
T
G
T
19550
G
T
C
A
G
A
C
C
T
G
G
C
A
T
G
G
G
C
T
C
A
T
G
A
G
G
G
G
A
T
C
T
C
C
T
G
A
T
C
A
G
T
G
G
G
T
T
A
C
A
19600
A
A
G
C
T
C
T
G
T
G
G
G
A
G
A
A
C
A
G
T
G
G
T
T
T
C
C
T
G
G
G
G
T
A
A
T
A
C
A
A
T
C
A
C
A
C
A
C
C
C
19650
C
T
T
C
C
C
T
T
G
G
C
T
G
G
G
G
G
T
G
G
G
G
G
T
T
C
C
C
T
T
A
G
C
T
C
T
G
T
G
T
C
A
C
T
C
C
T
G
G
G
19700 |
var(19690):[C:0.03]
T
G
G
G
C
C
A
T
T
G
T
C
C
A
A
T
C
C
T
G
C
T
T
T
C
C
T
T
C
A
T
T
G
T
C
T
G
T
G
G
G
T
C
A
A
G
T
T
A
T
19750 |
var(19739):[A:0.17]
T
T
C
C
C
T
G
A
A
C
A
G
T
C
C
C
A
A
T
G
T
G
A
C
T
A
T
C
T
G
G
A
T
A
T
T
T
C
A
A
T
T
T
C
A
G
G
T
G
C
19800 |
var(19768):[T:0.03]
T
G
T
G
T
T
C
A
C
T
C
G
C
C
C
C
T
T
T
C
A
T
T
C
C
T
C
T
T
T
G
T
G
A
G
T
G
C
C
G
C
G
A
A
C
T
A
C
A
G
19850 |
var(19839):[T:0.23]
|
var(19841):[T:0.01]
C
T
G
C
T
T
C
T
A
A
T
C
G
G
C
C
A
T
C
T
T
CTCATTTCT TTTTAGATTT ATTTTTACTT
19900
ACTTTGTGGT TTAATTTTCT GTTGTTACTA TACTATTTTA TATTCTAAAT
19950
TAATTATTGC TAGTTTGTAA GAAAAATTTT TGATATATAT TATTTGTTGA
20000
TCTTATACCC TACCATCTTT TTGGAACCTC GTTTTCCCCC AATATTTCTA
20050
ATATAACTGA TTTTGTTATA
T
TTTATATGT TTCTATTTAC AAACAGTAGA
20100 |
var(20071):[C:0.01]
AATTTTGTAT ATCTCTTTTT GC
A
A
T
T
T
A
T
A
T
A
T
A
T
A
T
A
T
A
T
T
T
T
T
A
A
T
T
T
20150 |
REPEAT
|
var(20140):[:0.22]
|
REPEAT
T
A
T
T
A
T
T
A
T
T
A
T
A
C
T
T
T
A
A
G
T
T
T
T
A
G
G
G
T
A
C
A
T
G
T
G
C
A
C
A
A
C
G
T
G
C
A
G
G
T
20200 |
var(20171):[:0.03]
T
T
G
T
T
A
C
A
T
A
T
G
T
A
T
A
C
A
T
A
T
G
C
C
A
T
G
T
T
G
G
T
G
T
G
C
T
G
C
A
C
C
C
A
T
T
A
A
C
T
20250
C
A
T
C
A
T
T
T
A
G
C
A
T
T
A
G
G
T
A
T
A
T
C
T
C
C
T
A
A
T
G
C
T
A
T
C
C
C
T
C
C
C
C
C
C
T
C
C
C
C
20300 |
var(20295):[T:0.02]
C
C
A
C
C
C
C
A
C
A
A
C
A
G
G
C
C
C
C
G
G
T
G
T
G
T
G
A
T
G
T
T
C
C
C
C
T
T
C
C
T
G
T
G
T
C
C
A
T
G
20350
T
G
T
T
C
T
C
A
T
T
G
T
T
C
A
A
T
T
C
C
C
A
C
C
T
A
T
G
A
G
T
G
A
G
A
A
C
A
T
G
C
G
G
T
G
T
T
T
G
G
20400 |
var(20366):[G:0.01]
|
NOT SCANNED
T
T
T
T
T
T
G
T
C
C
T
T
G
C
G
A
T
A
A
T
T
T
G
C
T
G
A
G
C
A
T
G
A
T
G
A
T
T
C
C
A
G
T
T
T
C
A
T
C
C
20450
A
T
G
T
C
C
C
T
G
C
A
A
A
G
G
A
C
A
T
G
A
A
T
T
C
A
T
C
A
T
T
T
T
T
T
A
T
G
G
C
T
G
C
A
T
A
G
T
A
T
20500
T
C
C
A
T
G
G
T
G
T
G
T
A
T
G
T
G
C
C
A
C
A
T
T
T
T
C
T
T
A
A
T
C
C
A
G
T
C
T
A
T
C
G
T
T
G
T
T
G
G
20550
A
C
A
T
T
T
A
G
G
T
T
G
G
T
T
C
C
A
A
G
T
C
T
T
T
G
C
T
A
T
T
G
T
G
A
A
T
A
G
T
G
C
C
G
C
A
A
T
A
A
20600
A
C
A
T
A
C
A
T
G
T
G
C
A
T
G
T
G
T
C
T
T
T
A
T
A
G
C
A
G
C
A
T
G
A
T
T
T
A
T
A
A
T
C
C
T
T
T
G
G
G
20650
T
A
T
A
T
A
C
C
C
A
T
T
A
A
T
G
G
G
A
T
G
G
C
T
G
G
G
T
C
A
A
A
T
G
G
T
A
T
T
T
C
T
A
G
T
T
C
T
A
G
20700
A
T
C
C
C
T
G
A
G
G
A
A
T
C
G
C
C
A
C
A
C
T
G
A
C
T
T
C
C
A
C
A
A
T
G
G
T
T
G
A
A
C
T
A
G
T
T
T
A
C
20750
A
G
T
C
C
C
A
C
C
A
A
C
A
G
T
G
T
A
A
A
A
G
T
G
T
T
C
C
T
A
T
T
T
C
T
C
C
A
C
A
T
C
C
T
C
T
C
C
A
G
20800
C
A
C
C
T
G
T
T
G
T
T
T
C
C
T
G
A
C
T
T
T
T
T
A
A
T
G
A
T
C
G
C
C
A
T
T
C
T
A
A
C
T
G
G
T
G
T
G
A
G
20850
A
T
G
G
T
A
T
C
T
C
A
T
T
G
T
G
G
T
T
T
T
G
A
T
T
T
G
C
A
T
T
T
C
T
C
T
G
A
T
G
G
C
C
A
G
T
G
A
T
G
20900 |
var(20900):[A:0.02]
A
T
G
A
G
C
A
T
T
T
T
T
T
C
A
T
G
T
G
T
T
T
T
T
T
G
C
C
T
G
C
A
T
A
A
A
T
G
T
C
T
T
C
T
T
T
T
G
A
G
20950 |
var(20927):[G:0.22]
A
A
G
T
G
T
C
T
G
T
T
C
A
T
A
T
C
C
T
T
C
G
C
C
C
A
C
T
T
T
T
T
G
A
T
G
G
G
G
T
T
G
T
T
T
G
G
T
T
T
21000 |
var(20971):[G:0.01]
T
T
T
C
T
T
G
T
A
A
A
T
T
T
G
T
T
T
A
A
G
T
T
C
T
T
T
G
T
A
G
A
T
T
C
T
G
G
A
T
A
T
T
A
G
C
C
C
T
T
21050 |
var(21039):[G:0.01]
T
A
T
C
A
G
A
T
G
A
G
T
A
G
G
T
T
G
C
A
A
A
A
A
T
T
T
T
C
T
C
C
C
A
T
T
C
T
G
T
A
G
G
T
T
G
C
C
T
G
21100 |
var(21052):[G:0.43]
|
var(21079):[T:0.18]
T
T
C
A
C
T
C
T
G
A
T
G
G
T
A
G
T
T
T
C
T
T
T
T
G
C
T
G
T
G
C
A
G
A
A
G
C
T
C
T
T
G
A
G
T
T
T
A
A
T
21150 |
var(21142):[T:0.42]
T
A
G
A
T
C
C
C
A
T
T
T
G
T
C
A
A
T
T
T
T
G
G
C
T
T
T
T
G
T
T
G
C
C
A
T
T
G
C
T
T
T
T
G
G
T
G
T
T
T
21200
T
A
G
A
C
A
T
G
A
A
G
T
C
C
T
T
G
C
C
C
A
T
G
C
T
G
T
A
A
A
T
G
G
G
C
T
A
A
A
T
G
C
T
C
C
A
A
T
T
A
21250 |
REPEAT
A
A
A
G
A
C
A
C
A
G
A
C
T
G
G
C
A
A
A
T
T
G
G
A
T
A
A
A
G
A
G
T
C
A
A
G
A
C
C
C
A
T
C
A
G
T
G
T
G
C
21300
T
G
T
A
T
T
C
A
G
T
A
A
A
C
C
C
A
T
C
T
C
A
C
C
T
G
C
A
G
G
G
A
C
A
C
A
C
A
T
A
G
G
C
T
C
A
A
A
A
T
21350
A
A
A
G
G
G
A
T
G
G
A
G
G
A
A
G
A
T
C
T
A
C
C
A
A
G
C
A
A
A
T
G
G
A
A
A
G
C
CA TTTATATTTT
21400
TATATCCCCT TTTTATAGGG GCCGGGAGAA CCTATACATT TTTGAAGAGA
21450
CTCATTGAAA TTTTTCA
T
TG AGTCTTTG
T
G
A
C
A
T
A
A
G
T
T
T
A
T
G
T
C
T
A
G
A
A
21500 |
var(21468):[C:0.01]
|
REPEAT
A
A
C
C
C
C
A
T
A
A
T
C
C
T
G
G
C
C
C
A
A
A
A
G
C
T
T
C
T
T
C
A
G
C
T
G
A
C
A
A
A
C
A
A
C
T
T
C
A
G
21550
C
A
A
A
G
T
T
T
C
A
A
G
A
T
A
C
A
A
A
A
T
C
A
A
C
A
T
A
A
A
A
A
A
T
C
C
C
T
A
G
C
A
T
T
C
C
T
A
T
A
21600 |
var(21562):[T:0.03]
|
var(21569):[C:0.03]
T
A
C
G
C
C
A
A
C
A
A
A
A
G
A
C
A
A
G
C
C
A
A
A
A
G
C
G
A
A
A
T
C
A
G
G
G
A
T
G
C
G
A
T
C
C
C
A
T
T
21650
C
A
C
A
A
T
T
G
C
C
T
C
A
A
A
A
A
G
A
A
T
A
A
A
A
T
A
C
C
C
A
G
C
A
A
T
A
C
A
G
C
T
A
A
C
C
A
G
G
G
21700
A
A
G
T
G
A
A
A
G
A
T
C
T
C
C
A
C
A
A
T
G
A
G
A
A
T
T
A
C
A
A
A
A
C
A
C
T
G
C
T
C
A
A
A
T
A
A
A
T
C
21750
A
C
A
A
A
C
A
A
A
T
G
A
G
A
A
A
A
C
A
T
C
C
C
A
T
G
C
T
C
A
T
G
G
T
A
G
A
A
A
G
A
A
T
C
A
A
T
A
C
C
21800 |
var(21764):[G:0.02]
A
T
T
A
A
A
A
T
A
G
C
C
A
T
A
C
T
G
C
C
C
A
A
A
G
C
G
T
T
T
T
A
C
A
G
A
T
T
C
A
A
T
G
G
T
A
T
T
C
A
21850 |
var(21844):[C:0.21]
T
A
T
C
A
A
A
C
T
C
C
A
A
T
G
A
C
A
T
T
C
T
T
C
A
C
A
G
A
A
C
T
G
T
A
A
A
A
C
A
C
T
A
T
T
T
T
A
A
A
21900 |
var(21885):[G:0.03]
A
T
T
C
A
T
A
T
G
G
T
A
C
C
A
A
A
A
G
A
C
A
A
T
A
A
A
G
C
T
G
G
A
G
G
C
A
T
C
A
C
G
T
T
A
C
C
C
A
A
21950 |
var(21911):[A:0.21]
A
C
C
T
C
A
A
C
C
T
G
T
A
C
C
A
C
A
G
G
G
C
T
G
C
A
G
T
A
A
C
C
A
A
A
A
C
A
G
C
A
T
G
G
T
A
C
T
A
A
22000
T
A
C
A
A
A
A
A
T
A
G
A
C
C
C
A
T
A
G
A
C
C
A
A
G
G
G
A
A
T
G
G
A
A
C
A
G
A
G
A
T
C
C
C
A
G
A
A
A
T
22050
A
A
G
G
C
T
G
C
A
C
T
A
C
T
A
C
A
A
C
C
A
T
C
T
G
A
T
T
T
T
C
A
A
C
A
A
C
G
C
T
A
A
A
A
C
A
A
A
A
A
22100
C
A
A
A
C
C
A
G
C
A
A
T
G
A
G
G
A
A
A
G
G
A
C
T
T
C
C
T
A
T
T
C
A
A
T
A
A
A
T
G
G
T
G
C
T
G
G
A
A
T
22150
A
A
C
T
G
G
C
C
A
G
T
C
A
T
A
T
G
C
A
G
A
A
G
A
T
T
G
A
A
A
C
T
G
G
A
C
C
C
C
T
T
T
T
T
T
A
T
A
C
C
22200
A
T
A
T
A
C
A
A
A
A
A
T
C
A
G
C
T
C
A
A
G
A
T
G
G
A
T
T
A
A
A
G
G
C
T
T
A
A
A
T
G
T
A
A
A
A
C
C
C
A
22250
A
A
A
C
T
A
T
G
A
A
A
A
C
C
C
T
G
G
A
A
G
A
C
A
A
C
C
T
A
G
G
C
A
A
T
A
C
C
A
T
T
C
T
G
G
A
C
A
T
C
22300 |
var(22298):[G:0.21]
G
G
A
A
C
A
G
G
C
A
A
A
G
A
T
T
T
C
A
T
G
A
C
A
A
A
C
A
C
A
C
C
A
A
A
A
G
C
A
A
T
C
A
T
A
A
T
G
A
A
22350 |
var(22343):[C:0.10]
|
var(22344):[C:0.41]
A
G
C
A
A
A
A
A
C
T
G
A
C
A
A
A
A
G
G
G
G
A
T
C
A
A
A
T
T
A
A
A
C
T
T
A
A
G
A
G
C
T
T
C
T
G
C
A
C
A
22400 |
var(22377):[G:0.04]
|
var(22379):[G:0.21]
G
C
A
A
A
A
G
A
A
A
C
T
A
T
C
A
A
C
A
G
A
G
T
A
A
A
C
A
A
A
C
A
A
C
A
T
A
C
A
G
T
A
T
G
G
G
A
G
A
A
22450
A
A
T
G
T
T
T
G
C
A
A
G
C
T
A
T
G
C
A
T
G
T
G
A
C
A
A
A
G
G
T
C
T
A
A
T
A
T
C
C
A
G
C
A
T
C
T
A
T
A
22500
A
A
A
A
C
T
G
A
A
G
C
A
A
A
T
T
T
A
C
A
A
G
A
A
A
A
A
A
A
T
T
A
A
A
A
A
C
T
G
G
A
C
A
A
A
G
A
A
C
A
22550
T
G
A
A
C
A
G
A
C
A
C
T
T
T
T
C
A
A
A
A
G
A
A
G
A
C
A
T
A
C
A
C
G
C
A
G
C
C
A
A
C
A
A
G
C
T
T
A
A
G
22600
A
A
A
A
A
A
A
T
C
T
C
A
A
T
T
T
C
A
C
C
A
A
T
T
A
T
T
A
A
A
A
A
A
T
A
C
A
A
A
T
C
A
A
A
A
C
C
A
C
A
22650
A
T
G
A
G
A
T
A
A
C
A
T
C
T
C
A
C
A
C
C
A
G
T
C
A
G
A
A
T
A
G
C
T
A
T
T
A
T
T
A
A
A
A
G
G
T
C
A
A
A
22700
A
A
A
T
A
A
C
A
A
A
T
G
C
T
G
A
T
G
A
G
G
T
T
G
C
A
G
A
G
A
A
A
A
G
G
A
A
A
T
G
T
T
T
A
T
A
C
A
C
T
22750
G
T
T
G
G
T
T
A
G
A
G
T
G
C
A
A
A
T
T
A
G
T
T
C
A
A
C
C
A
T
T
G
T
G
A
A
A
A
A
T
A
A
T
G
T
G
G
C
A
G
22800
T
T
C
C
T
G
C
G
G
C
C
A
A
A
A
A
A
C
A
T
A
G
A
A
A
A
A
A
A
G
C
T
C
A
T
C
A
T
C
A
C
T
G
G
T
C
A
T
C
A
22850 |
REPEAT
G
A
G
A
A
A
T
G
C
A
A
A
T
C
A
A
A
A
C
C
A
T
A
A
T
G
G
T
A
T
A
C
C
A
T
C
T
C
A
C
A
C
C
A
G
T
T
A
G
A
22900 |
var(22878):[C:0.21]
A
T
G
G
T
G
A
T
C
A
T
T
A
A
A
A
A
G
T
C
A
G
G
A
A
A
C
A
A
C
A
G
A
T
G
C
T
G
G
A
G
A
G
G
A
T
G
T
G
G
22950 |
NOT SCANNED
A
G
A
A
A
T
A
G
G
A
A
C
A
C
T
T
T
T
A
C
A
C
T
G
T
T
G
G
T
G
G
G
A
G
T
G
T
A
A
A
T
T
A
G
T
T
C
A
A
C
23000
C
A
T
T
G
T
G
G
A
A
G
A
C
A
G
T
G
T
G
G
T
G
A
T
T
C
C
T
C
A
A
G
G
A
T
T
T
A
G
A
A
C
C
A
G
A
A
A
T
G
23050
C
C
A
T
T
T
G
A
C
C
C
A
G
C
A
A
T
C
G
C
A
T
T
A
C
T
G
G
G
T
A
C
A
T
A
C
T
A
A
A
A
T
G
T
A
C
A
T
A
A
23100
A
T
C
A
T
T
C
T
A
C
T
A
T
A
A
A
G
A
C
A
C
A
T
G
C
A
C
A
C
A
T
A
T
G
T
T
T
A
T
T
G
C
A
G
C
A
C
T
G
T
23150
T
C
A
C
A
A
T
A
G
C
A
A
A
G
A
C
T
T
G
G
A
A
G
C
A
A
C
C
C
A
A
A
T
A
C
C
C
A
T
C
A
A
T
G
A
T
A
G
A
C
23200
T
G
G
A
T
T
A
A
A
A
A
A
A
T
G
T
G
G
C
A
C
A
T
A
T
G
C
A
C
C
A
T
G
G
A
A
T
A
C
T
A
T
G
C
A
G
C
C
A
T
23250
A
A
A
A
A
A
G
G
A
T
A
A
G
T
T
C
C
T
G
T
C
C
T
T
T
G
C
A
G
G
G
A
C
A
T
G
G
A
T
G
A
A
G
C
T
T
G
A
A
A
23300
C
C
A
T
C
A
T
T
C
T
C
A
G
C
A
A
A
C
T
A
A
C
A
C
A
A
G
A
A
C
A
G
A
A
A
A
C
C
A
A
A
C
A
A
T
G
C
A
T
G
23350
T
T
C
T
C
A
C
T
C
A
T
A
A
G
T
G
G
G
A
G
T
T
G
A
A
C
A
A
T
G
A
G
A
A
C
A
C
A
T
G
G
A
C
A
A
A
G
G
G
A
23400
G
G
G
G
A
A
C
A
T
T
A
C
A
C
A
C
C
A
G
G
G
C
C
T
G
T
C
A
G
G
G
G
G
T
G
A
G
G
G
C
T
A
T
G
G
G
A
G
G
G
23450
A
C
A
G
C
A
T
C
A
G
G
A
G
A
A
A
T
A
C
C
T
A
A
T
G
T
A
G
A
T
G
A
T
G
A
G
T
T
G
A
T
G
G
G
T
G
C
A
G
C
23500
A
A
A
C
A
A
C
C
T
T
G
G
C
C
C
G
T
G
T
A
T
A
C
C
T
A
T
G
T
A
A
C
A
A
A
C
C
T
G
C
A
C
A
T
T
C
T
G
C
A
23550 |
var(23509):[A:0.21]
C
A
T
G
T
A
T
C
C
C
A
G
A
A
C
T
T
A
A
A
G
T
A
T
A
A
T
TTA GAAATATATG CAAAAAACAA
23600 |
var(23572):[C:0.01]
ATAATTTGCT GAGGAAATTT TTATCTATGT GCATCAT
A
G
G
A
T
T
T
T
T
G
C
A
T
23650 |
REPEAT
T
A
T
G
A
G
T
G
A
G
A
C
T
G
A
C
C
T
G
T
G
A
T
A
T
T
C
C
T
T
T
T
T
T
G
T
A
T
G
T
T
C
C
T
T
G
T
C
A
C
23700
A
T
T
T
T
T
G
T
A
T
T
G
A
G
A
T
C
A
T
T
T
T
G
G
T
C
T
C
A
A
A
A
A
A
T
A
A
A
A
A
A
T
T
T
T
T
A
A
A
T
23750
T
T
T
T
T
T
C
T
A
T
T
T
T
C
T
T
G
A
G
G
A
T
T
T
T
G
T
A
T
G
A
G
A
T
T
A
G
A
A
C
A
A
T
T
T
C
T
T
A
A
23800
A
T
T
A
T
T
T
G
T
A
A
A
A
T
T
C
A
C
T
G
A
G
G
A
A
G
A
C
A
T
A
A
T
T
A
T
A
G
A
T
T
G
A
A
T
T
T
A
T
A
23850 |
REPEAT
A
A
T
C
T
A
T
G
T
A
G
A
A
A
A
C
T
A
T
T
T
A
G
A
T
T
T
T
T
G
T
A
C
A
T
C
T
T
C
T
T
G
T
G
T
A
A
G
T
T
23900
T
T
G
G
A
A
T
T
T
A
T
A
T
T
T
T
T
C
A
A
T
G
A
G
T
T
T
A
T
C
C
A
T
T
T
C
C
T
A
T
A
C
T
T
T
T
T
C
A
A
23950 |
var(23947):[C:0.17]
A
T
T
T
A
T
T
G
G
C
A
T
A
A
A
G
T
A
A
T
T
T
C
T
A
T
T
A
T
C
A
T
T
T
T
A
T
G
A
T
C
T
T
T
A
T
G
T
C
T
24000
G
T
A
G
G
A
T
A
T
G
T
A
G
T
G
T
T
A
G
A
C
T
C
C
T
C
A
T
C
G
T
T
C
C
T
G
A