Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000100 CC 4 0 4 CT 18 7 25 TT 1 15 16 8.069 0.787 1.732 000397 AA 2 0 2 AG 17 9 26 GG 4 13 17 5.512 1.455 4.050 000729 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 000790 CC 19 17 36 CT 5 6 11 TT 0 0 0 0.324 0.517 0.826 000940 AA 22 22 44 AC 2 0 2 CC 0 0 0 0.045 0.000 0.023 001080 -- 23 23 46 +- 1 0 1 ++ 0 0 0 0.011 0.000 0.005 001224 CC 22 23 45 CG 2 0 2 GG 0 0 0 0.045 0.000 0.022 001249 AA 0 0 0 AG 0 6 6 GG 24 17 41 0.000 0.517 0.218 001454 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 001469 -- 17 23 40 +- 7 0 7 ++ 0 0 0 0.700 0.000 0.304 001720 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 001917 CC 20 23 43 CT 2 0 2 TT 0 0 0 0.050 0.000 0.023 002174 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 002271 GG 22 23 45 GT 1 0 1 TT 0 0 0 0.011 0.000 0.006 002282 AA 0 0 0 AG 7 0 7 GG 16 23 39 0.741 0.000 0.312 002294 CC 0 0 0 CG 1 0 1 GG 22 23 45 0.011 0.000 0.006 002296 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 002878 CC 19 23 42 CT 4 0 4 TT 0 0 0 0.209 0.000 0.095 002947 CC 20 23 43 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 002974 AA 22 22 44 AG 0 1 1 GG 0 0 0 0.000 0.011 0.006 003137 CC 21 23 44 CT 2 0 2 TT 0 0 0 0.048 0.000 0.023 003192 CC 22 22 44 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 003204 AA 21 23 44 AG 1 0 1 GG 0 0 0 0.012 0.000 0.006 003865 CC 24 17 41 CT 0 6 6 TT 0 0 0 0.000 0.517 0.218 003939 AA 0 0 0 AC 7 0 7 CC 17 23 40 0.700 0.000 0.304 004138 CC 24 21 45 CT 0 2 2 TT 0 0 0 0.000 0.048 0.022 004164 CC 24 21 45 CT 0 2 2 TT 0 0 0 0.000 0.048 0.022 004359 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 004421 CC 24 22 46 CG 0 1 1 GG 0 0 0 0.000 0.011 0.005 004541 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 004570 AA 1 8 9 AG 4 15 19 GG 19 0 19 1.361 5.385 1.102 004614 AA 1 14 15 AG 19 9 28 GG 4 0 4 8.886 1.361 3.190 004848 AA 0 0 0 AG 2 0 2 GG 13 21 34 0.077 0.000 0.029 004914 AA 8 12 20 AT 5 9 14 TT 2 0 2 0.639 1.562 0.049 005243 AA 21 23 44 AG 1 0 1 GG 0 0 0 0.012 0.000 0.006 005245 AA 10 0 10 AG 11 9 20 GG 1 14 15 0.889 1.361 0.450 005552 -- 0 0 0 +- 1 0 1 ++ 20 20 40 0.012 0.000 0.006 005923 AA 2 0 2 AG 18 9 27 GG 4 14 18 6.254 1.361 4.217 006057 CC 4 0 4 CG 18 9 27 GG 2 14 16 6.254 1.361 2.466 006058 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 006180 AA 4 14 18 AG 16 9 25 GG 4 0 4 2.667 1.361 1.317 006232 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 006381 CC 0 0 0 CT 2 0 2 TT 21 23 44 0.048 0.000 0.023 006560 AA 0 0 0 AG 7 0 7 GG 16 23 39 0.741 0.000 0.312 007048 GG 0 0 0 GT 4 0 4 TT 20 23 43 0.198 0.000 0.093 007105 AA 20 19 39 AC 0 1 1 CC 0 0 0 0.000 0.013 0.006 007107 GG 20 19 39 GT 0 1 1 TT 0 0 0 0.000 0.013 0.006 007138 AA 13 20 33 AT 7 0 7 TT 0 0 0 0.900 0.000 0.368 008696 AA 24 22 46 AC 0 1 1 CC 0 0 0 0.000 0.011 0.005 009226 GG 0 0 0 GT 7 0 7 TT 17 23 40 0.700 0.000 0.304 009393 AA 0 0 0 AG 2 0 2 GG 22 23 45 0.045 0.000 0.022 009449 -- 0 0 0 +- 4 6 10 ++ 20 17 37 0.198 0.517 0.666 009451 AA 0 0 0 AG 5 0 5 GG 17 23 40 0.362 0.000 0.156 009515 AA 4 14 18 AG 16 9 25 GG 2 0 2 4.791 1.361 3.327 009516 CC 0 0 0 CT 1 0 1 TT 21 23 44 0.012 0.000 0.006 009528 CC 15 17 32 CT 7 6 13 TT 0 0 0 0.787 0.517 1.283 009544 CC 0 0 0 CG 7 6 13 GG 15 17 32 0.787 0.517 1.283 009583 -- 2 0 2 +- 18 9 27 ++ 4 14 18 6.254 1.361 4.217 009600 CC 0 0 0 CG 1 0 1 GG 23 23 46 0.011 0.000 0.005 010013 CC 0 0 0 CT 0 4 4 TT 24 19 43 0.000 0.209 0.093 010356 GG 4 14 18 GT 18 9 27 TT 2 0 2 6.254 1.361 4.217 010616 CC 4 0 4 CT 18 9 27 TT 2 14 16 6.254 1.361 2.466 010878 AA 24 22 46 AG 0 1 1 GG 0 0 0 0.000 0.011 0.005 011050 GG 24 22 46 GT 0 1 1 TT 0 0 0 0.000 0.011 0.005 011072 CC 4 14 18 CT 18 9 27 TT 2 0 2 6.254 1.361 4.217 011271 CC 0 0 0 CT 2 0 2 TT 22 22 44 0.045 0.000 0.023 011392 CC 18 0 18 CT 5 14 19 TT 1 8 9 0.644 4.791 0.915 011528 AA 2 14 16 AG 18 9 27 GG 4 0 4 6.254 1.361 2.466 011963 CC 0 0 0 CT 4 0 4 TT 18 23 41 0.220 0.000 0.097 011978 CC 0 0 0 CT 0 1 1 TT 22 22 44 0.000 0.011 0.006 012059 -- 14 23 37 +- 8 0 8 ++ 0 0 0 1.086 0.000 0.428 012223 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 012294 AA 23 23 46 AC 1 0 1 CC 0 0 0 0.011 0.000 0.005 012457 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 012578 CC 19 0 19 CT 4 15 19 TT 1 8 9 1.361 5.385 1.102 012579 AA 0 0 0 AG 4 0 4 GG 20 23 43 0.198 0.000 0.093 012596 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 012672 CC 23 22 45 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 013019 AA 12 0 12 AT 4 7 11 TT 1 8 9 0.617 1.389 3.004 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 001080: t 001469: t 005552: TG 009449: gtgta 009583: ag 012059: C