Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000083 CC 0 0 0 CT 2 0 2 TT 19 12 31 0.053 0.000 0.032 000173 GG 0 0 0 GT 1 0 1 TT 22 16 38 0.011 0.000 0.007 000296 GG 17 8 25 GT 6 5 11 TT 0 3 3 0.517 1.512 1.162 000327 CC 17 8 25 CT 6 5 11 TT 0 3 3 0.517 1.512 1.162 000663 CC 0 0 0 CT 2 0 2 TT 22 21 43 0.045 0.000 0.023 000903 CC 7 10 17 CT 14 10 24 TT 3 2 5 0.960 0.050 0.659 001232 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 001355 CC 21 21 42 CT 3 0 3 TT 0 0 0 0.107 0.000 0.054 001366 CC 24 19 43 CT 0 1 1 TT 0 0 0 0.000 0.013 0.006 001532 CC 16 13 29 CT 1 0 1 TT 0 0 0 0.016 0.000 0.009 001646 -- 0 0 0 +- 4 1 5 ++ 16 15 31 0.247 0.017 0.200 001850 CC 20 16 36 CT 1 0 1 TT 0 0 0 0.012 0.000 0.007 001895 CC 0 0 0 CT 5 1 6 TT 12 14 26 0.505 0.018 0.342 002088 AA 2 0 2 AG 4 1 5 GG 18 17 35 3.840 0.015 5.994 002427 CC 23 18 41 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 003228 AA 7 10 17 AG 13 10 23 GG 4 2 6 0.243 0.050 0.169 003349 CC 0 0 0 CT 1 1 2 TT 21 22 43 0.012 0.011 0.023 003389 GG 0 0 0 GT 1 0 1 TT 21 23 44 0.012 0.000 0.006 003642 CC 16 22 38 CT 6 1 7 TT 0 0 0 0.548 0.011 0.320 003656 GG 21 23 44 GT 1 0 1 TT 0 0 0 0.012 0.000 0.006 003704 AA 15 22 37 AT 7 1 8 TT 0 0 0 0.787 0.011 0.428 003799 AA 17 3 20 AG 6 11 17 GG 1 9 10 0.240 0.016 2.759 003838 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 003876 CC 17 2 19 CT 5 12 17 TT 2 9 11 2.400 0.517 3.056 004194 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 004195 AA 0 0 0 AG 1 1 2 GG 23 21 44 0.011 0.012 0.023 004335 CC 10 6 16 CT 14 9 23 TT 0 7 7 4.069 0.714 0.073 004351 AA 22 22 44 AG 2 0 2 GG 0 0 0 0.045 0.000 0.023 004406 AA 0 0 0 AG 1 0 1 GG 23 22 45 0.011 0.000 0.006 004804 AA 0 0 0 AG 5 7 12 GG 15 13 28 0.408 0.900 1.246 004809 AA 0 0 0 AG 2 0 2 GG 19 20 39 0.053 0.000 0.026 004811 AA 0 0 0 AG 1 0 1 GG 19 20 39 0.013 0.000 0.006 004875 CC 21 21 42 CT 0 2 2 TT 0 0 0 0.000 0.048 0.024 005094 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 005095 AA 0 0 0 AG 2 0 2 GG 21 23 44 0.048 0.000 0.023 005125 AA 23 22 45 AG 0 1 1 GG 0 0 0 0.000 0.011 0.006 005287 CC 0 0 0 CG 0 2 2 GG 22 21 43 0.000 0.048 0.023 005511 AA 2 2 4 AG 11 7 18 GG 11 14 25 0.107 0.616 0.087 005542 AA 0 0 0 AG 1 1 2 GG 23 22 45 0.011 0.011 0.022 006120 CC 15 12 27 CT 2 7 9 TT 1 0 1 3.445 0.969 0.056 006217 AA 3 4 7 AG 14 11 25 GG 6 7 13 1.308 0.008 0.775 006656 CC 0 0 0 CG 1 0 1 GG 23 22 45 0.011 0.000 0.006 006697 AA 23 21 44 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 006821 CC 0 3 3 CT 2 7 9 TT 22 13 35 0.045 1.431 3.846 006957 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 007250 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 007278 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 007372 AA 0 0 0 AT 1 0 1 TT 23 23 46 0.011 0.000 0.005 007436 CC 10 10 20 CT 12 10 22 TT 2 3 5 0.375 0.040 0.084 007475 AA 5 12 17 AC 11 8 19 CC 8 3 11 0.114 0.733 1.491 007759 AA 22 23 45 AT 1 0 1 TT 0 0 0 0.011 0.000 0.006 007765 CC 22 21 43 CT 1 2 3 TT 0 0 0 0.011 0.048 0.052 007768 CC 2 5 7 CG 6 8 14 GG 16 10 26 1.407 1.675 3.895 008045 AA 19 23 42 AG 5 0 5 GG 0 0 0 0.324 0.000 0.148 008248 CC 17 21 38 CT 0 2 2 TT 0 0 0 0.000 0.048 0.026 008258 -- 16 23 39 +- 1 0 1 ++ 0 0 0 0.016 0.000 0.006 009145 AA 0 0 0 AG 3 0 3 GG 20 21 41 0.112 0.000 0.055 009629 AA 2 4 6 AG 12 10 22 GG 10 9 19 0.375 0.175 0.009 009939 CC 0 0 0 CT 0 1 1 TT 24 21 45 0.000 0.012 0.006 010035 CC 21 15 36 CT 2 7 9 TT 1 0 1 4.959 0.787 0.230 010049 AA 0 0 0 AC 1 4 5 CC 23 19 42 0.011 0.209 0.148 010137 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 010138 AA 1 6 7 AG 12 8 20 GG 10 8 18 1.239 1.564 0.134 010328 AA 21 21 42 AG 2 0 2 GG 0 0 0 0.048 0.000 0.024 010546 AA 17 13 30 AG 6 7 13 GG 0 0 0 0.517 0.900 1.364 011060 AA 19 21 40 AG 0 1 1 GG 0 0 0 0.000 0.012 0.006 011200 GG 19 22 41 GT 1 0 1 TT 0 0 0 0.013 0.000 0.006 011620 GG 0 0 0 GT 3 0 3 TT 21 23 44 0.107 0.000 0.051 011768 AA 2 6 8 AG 14 11 25 GG 8 6 14 1.434 0.043 0.312 011801 GG 0 0 0 GT 8 1 9 TT 16 19 35 0.960 0.013 0.571 011819 AA 9 2 11 AT 7 7 14 TT 8 11 19 4.146 0.299 5.143 011836 CC 0 0 0 CT 8 0 8 TT 16 16 32 0.960 0.000 0.494 011842 AA 0 0 0 AG 2 7 9 GG 22 14 36 0.045 0.840 0.556 012339 AA 1 0 1 AG 10 4 14 GG 12 17 29 0.374 0.233 0.212 012889 CC 21 23 44 CT 3 0 3 TT 0 0 0 0.107 0.000 0.051 013431 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 013434 GG 11 22 33 GT 12 1 13 TT 1 0 1 1.059 0.011 0.046 013458 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 013715 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 014069 -- 0 0 0 +- 5 0 5 ++ 19 23 42 0.324 0.000 0.148 014116 AA 18 23 41 AG 5 0 5 GG 0 0 0 0.342 0.000 0.152 014671 GG 21 23 44 GT 2 0 2 TT 0 0 0 0.048 0.000 0.023 014865 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 015452 AA 0 0 0 AG 6 0 6 GG 18 23 41 0.490 0.000 0.218 015474 AA 1 0 1 AG 8 4 12 GG 14 19 33 0.011 0.209 0.006 015481 CC 19 15 34 CT 5 8 13 TT 0 0 0 0.324 1.019 1.211 015543 CC 1 0 1 CT 8 4 12 TT 15 19 34 0.003 0.209 0.002 015651 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 001646: c 008258: G 014069: CCCAGCTATCGCC