Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000086 00000 ------------ G 0.98 0.94 0.96 A 0.02 0.06 0.04 0000 --- --- --- --- 000135 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 000194 00000 ------------ G 0.92 0.61 0.78 C 0.08 0.39 0.22 0000 --- --- --- --- 000261 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000413 00000 ------------ A 0.98 0.90 0.95 G 0.02 0.10 0.05 0000 --- --- --- --- 000670 00000 ------------ G 0.96 0.95 0.96 A 0.04 0.05 0.04 0000 --- --- --- --- 000758 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001131 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 001169 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001279 00000 ------------ T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 001564 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 001586 00018 5' UTR A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 001730 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001774 00000 ------------ A 0.52 0.83 0.68 G 0.48 0.17 0.32 0000 --- --- --- --- 001849 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 001976 00098 5' UTR G 0.98 0.90 0.94 T 0.02 0.10 0.06 0000 --- --- --- --- 002043 00000 ------------ C 0.62 0.86 0.74 T 0.38 0.14 0.26 0000 --- --- --- --- 002131 00000 ------------ C 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 002161 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 002238 00000 ------------ + 0.00 0.09 0.04 - 1.00 0.91 0.96 0000 --- --- --- --- 002239 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002248 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 002272 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002408 00000 ------------ G 0.48 0.83 0.65 A 0.52 0.17 0.35 0000 --- --- --- --- 002414 00000 ------------ T 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 002471 00000 ------------ T 0.58 0.83 0.70 C 0.42 0.17 0.30 0000 --- --- --- --- 002633 00177 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0021 GCC TCC ALA(A) SER(S) 002665 00209 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0031 ATG ATT MET(M) ILE(I) 002845 00389 SYNON A 0.98 0.89 0.94 G 0.02 0.11 0.06 0091 ACA ACG THR(T) THR(T) 002848 00392 SYNON A 0.98 0.89 0.94 G 0.02 0.11 0.06 0092 GAA GAG GLU(E) GLU(E) 003183 00000 ------------ + 0.78 0.97 0.86 - 0.22 0.03 0.14 0000 --- --- --- --- 003641 00000 ------------ T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 003689 00561 NON-SYN A 0.98 0.91 0.95 C 0.02 0.09 0.05 0149 AGT CGT SER(S) ARG(R) 003788 00000 ------------ T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 003896 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003993 00000 ------------ T 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 004247 00000 ------------ G 0.92 0.72 0.82 A 0.08 0.28 0.18 0000 --- --- --- --- 004464 00000 ------------ T 0.40 0.82 0.59 C 0.60 0.17 0.41 0000 --- --- --- --- 004503 00000 ------------ + 0.70 0.44 0.59 - 0.30 0.56 0.41 0000 --- --- --- --- 004594 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 004611 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 004670 00000 ------------ + 0.98 0.89 0.94 - 0.02 0.11 0.06 0000 --- --- --- --- 004687 00000 ------------ G 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 004920 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004930 00000 ------------ C 0.73 0.57 0.66 T 0.27 0.42 0.34 0000 --- --- --- --- 004970 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005668 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005828 00000 ------------ G 0.75 0.54 0.65 A 0.25 0.46 0.35 0000 --- --- --- --- 005924 00000 ------------ C 0.92 0.65 0.79 A 0.08 0.35 0.21 0000 --- --- --- --- 005960 00857 SYNON T 0.98 0.89 0.94 C 0.02 0.11 0.06 0247 AAT AAC ASN(N) ASN(N) 005989 00886 NON-SYN A 0.96 1.00 0.98 C 0.04 0.00 0.02 0257 CAA CCA GLN(Q) PRO(P) 006092 00989 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0291 AAT AAC ASN(N) ASN(N) 006102 00999 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0295 GAG AAG GLU(E) LYS(K) 006219 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006747 00000 ------------ A 0.61 0.93 0.77 G 0.39 0.07 0.23 0000 --- --- --- --- 007003 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007158 00000 ------------ A 0.58 0.93 0.76 G 0.42 0.07 0.24 0000 --- --- --- --- 007305 00000 ------------ G 0.58 0.93 0.76 A 0.42 0.07 0.24 0000 --- --- --- --- 007532 01377 NON-SYN G 0.96 1.00 0.98 C 0.04 0.00 0.02 0421 GAG CAG GLU(E) GLN(Q) 007583 00000 ------------ A 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 007632 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 007673 00000 ------------ T 0.98 0.88 0.93 C 0.02 0.12 0.07 0000 --- --- --- --- 007803 01518 NON-SYN C 0.83 0.98 0.90 T 0.17 0.02 0.10 0468 CAT TAT HIS(H) TYR(Y) 007995 00000 ------------ T 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 008517 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 008716 00000 ------------ T 0.98 0.88 0.93 C 0.02 0.12 0.07 0000 --- --- --- --- 008765 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 008804 01764 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0550 CCC TCC PRO(P) SER(S) 008879 01839 NON-SYN C 1.00 0.95 0.98 T 0.00 0.05 0.02 0575 CTC TTC LEU(L) PHE(F) 008934 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009187 00000 ------------ C 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 009225 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009258 00000 ------------ A 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 009368 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009639 00000 ------------ A 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 009831 01916 SYNON T 0.83 0.98 0.90 C 0.17 0.02 0.10 0600 GAT GAC ASP(D) ASP(D) 010024 00000 ------------ + 0.98 0.91 0.95 - 0.02 0.09 0.05 0000 --- --- --- --- 010054 00000 ------------ A 0.87 0.55 0.73 G 0.13 0.45 0.27 0000 --- --- --- --- 010087 00000 ------------ T 0.67 0.97 0.81 A 0.33 0.03 0.19 0000 --- --- --- --- 010130 00000 ------------ T 0.46 0.97 0.69 C 0.54 0.03 0.31 0000 --- --- --- --- 010728 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 010899 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 011028 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011029 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012037 02903 3' UTR T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 012228 03094 3' UTR A 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 012618 03484 3' UTR A 0.40 0.83 0.62 G 0.60 0.17 0.38 0000 --- --- --- --- 012629 03495 3' UTR C 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 013014 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 013083 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 013249 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 013252 00000 ------------ G 0.44 0.85 0.64 C 0.56 0.15 0.36 0000 --- --- --- --- 013311 00000 ------------ T 0.90 0.64 0.77 C 0.10 0.36 0.23 0000 --- --- --- --- 013432 00000 ------------ + 0.69 0.93 0.80 - 0.31 0.07 0.20 0000 --- --- --- --- 013434 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 013435 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 013529 00000 ------------ C 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 013531 00000 ------------ C 0.57 0.85 0.71 T 0.43 0.15 0.29 0000 --- --- --- --- 013571 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002238: A 003183: AC 004503: CA 004670: T 010024: TTA 013432: C