Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000338 A 23 13 36 G 25 33 58 000339 T 2 0 2 A 46 46 92 000483 T 26 13 39 C 22 33 55 001121 G 23 5 28 A 15 39 54 001926 T 14 1 15 C 34 45 79 002713 A 5 0 5 G 41 46 87 002976 A 0 1 1 G 44 43 87 003051 C 13 2 15 A 31 40 71 003406 G 2 0 2 A 44 42 86 003874 T 1 0 1 C 47 46 93 003915 C 3 0 3 T 45 46 91 004129 T 2 0 2 C 44 42 86 004138 A 0 1 1 G 48 41 89 005466 A 1 0 1 T 45 44 89 006297 A 2 0 2 G 38 46 84 006364 A 7 24 31 G 37 22 59 007025 T 5 0 5 C 39 46 85 007242 A 2 0 2 G 42 46 88 008395 C 3 0 3 T 43 40 83 008477 A 2 0 2 G 44 38 82 008667 A 3 0 3 C 41 38 79 009100 G 6 0 6 C 40 46 86 009107 C 1 0 1 T 45 46 91 009134 A 1 0 1 C 45 46 91 009184 - 7 1 8 + 39 45 84 009211 T 2 0 2 C 44 46 90 009629 T 5 0 5 C 35 40 75 009755 A 3 0 3 G 37 40 77 009914 G 6 2 8 T 34 38 72 010262 C 5 0 5 A 43 46 89 010289 A 2 0 2 G 46 46 92 010298 C 2 0 2 T 46 46 92 010792 C 29 2 31 T 19 44 63 010793 T 29 2 31 C 19 44 63 010843 + 8 2 10 - 40 44 84 010885 C 34 2 36 T 12 44 56 011009 T 1 0 1 C 45 46 91 011010 A 0 1 1 G 46 45 91 011099 + 30 2 32 - 18 44 62 011274 C 34 3 37 T 12 43 55 011422 T 0 1 1 C 46 43 89 011641 G 29 3 32 C 11 43 54 011705 C 29 3 32 T 11 43 54 011738 C 29 2 31 G 11 44 55 011791 C 28 2 30 G 10 44 54 012023 C 13 0 13 T 29 46 75 012058 T 6 0 6 C 36 46 82 012083 G 0 1 1 A 44 45 89 012131 T 3 0 3 C 39 46 85 012173 A 5 0 5 C 39 46 85 012300 G 33 4 37 A 11 42 53 012384 T 12 0 12 C 32 44 76 012432 - 19 1 20 + 25 41 66 012749 A 21 11 32 G 23 35 58 012777 G 0 1 1 C 44 45 89 012780 * 012800 C 4 0 4 A 40 46 86 012809 C 11 2 13 T 33 44 77 012818 G 4 0 4 A 40 46 86 012824 - 18 3 21 + 26 43 69 012837 C 6 0 6 T 40 46 86 012838 A 4 0 4 G 40 46 86 012982 C 3 0 3 T 41 46 87 013314 A 1 0 1 C 45 46 91 013315 T 1 0 1 A 45 46 91 013343 T 14 1 15 C 32 45 77 013373 T 14 0 14 C 32 46 78 013403 T 16 1 17 C 32 45 77 013525 T 1 0 1 C 45 46 91 013651 G 1 0 1 T 43 46 89 013726 T 6 0 6 C 38 46 84 013773 A 0 1 1 G 44 45 89 015488 - 0 3 3 + 46 41 87 015560 T 14 1 15 C 32 43 75 015598 - 14 1 15 + 32 43 75 020070 T 5 0 5 C 39 44 83 020174 G 14 1 15 T 30 45 75 020325 G 0 1 1 A 48 45 93 020406 C 1 0 1 T 43 42 85 020682 G 5 0 5 A 39 38 77 020824 T 6 0 6 C 38 38 76 020989 - 3 0 3 + 41 42 83 021057 G 3 0 3 A 41 42 83 021199 G 1 0 1 A 43 42 85 021370 A 1 0 1 T 47 46 93 021436 C 1 0 1 T 47 46 93 021525 C 18 1 19 T 30 45 75 021579 G 3 0 3 T 45 44 89 021584 G 3 0 3 T 45 46 91 021587 C 3 0 3 T 45 46 91 021827 C 15 1 16 T 27 45 72 021903 + 3 0 3 - 45 46 91 021927 T 2 0 2 G 44 46 90 021988 A 6 0 6 C 40 46 86 022021 A 3 0 3 G 43 46 89 022191 T 1 0 1 C 45 46 91 022192 G 17 1 18 A 29 45 74 022498 C 3 0 3 A 43 46 89 022652 G 1 0 1 A 47 46 93 023085 A 0 1 1 G 38 39 77 023149 G 19 2 21 A 19 38 57 023167 A 0 2 2 G 38 38 76 023184 - 11 1 12 + 27 39 66 023724 T 1 2 3 C 45 42 87 024678 T 14 1 15 C 28 31 59 025237 A 0 1 1 G 42 43 85 025753 - 14 1 15 + 28 45 73 026349 A 1 0 1 G 43 46 89 026452 T 6 0 6 C 38 46 84 026470 G 14 1 15 C 32 45 77 026630 + 12 1 13 - 30 37 67 027056 C 5 0 5 T 43 40 83 027215 C 6 0 6 T 42 42 84 027656 - 6 0 6 + 38 42 80 027796 G 5 0 5 A 39 40 79 028899 T 2 0 2 C 44 46 90 028931 * 029012 T 0 2 2 C 44 42 86 029013 A 3 0 3 G 43 46 89 029492 T 4 10 14 C 44 36 80 029667 A 16 1 17 G 28 45 73 029916 - 1 0 1 + 45 44 89 030167 G 15 1 16 C 31 43 74 030318 C 12 1 13 T 34 45 79 030421 C 2 0 2 T 44 46 90 031493 A 1 0 1 T 41 46 87 031632 G 1 0 1 A 43 46 89 032836 C 9 0 9 T 25 46 71 033084 A 1 5 6 G 37 39 76 033250 A 0 1 1 T 36 43 79 033371 C 21 1 22 T 15 45 60 033703 A 7 1 8 G 19 45 64 033925 G 6 0 6 A 38 44 82 034159 A 2 0 2 G 44 44 88 034208 C 7 0 7 T 39 42 81 034537 T 1 2 3 G 45 42 87 034731 - 2 0 2 + 42 46 88 034816 T 1 0 1 C 43 46 89 034891 T 2 0 2 C 38 46 84 034909 G 2 0 2 A 38 46 84 035139 C 3 0 3 T 31 44 75 035446 G 1 0 1 C 39 44 83 035654 T 5 0 5 C 43 46 89 035655 G 4 0 4 A 44 46 90 036733 - 3 0 3 + 41 44 85 036752 T 7 24 31 C 37 20 57 036852 G 0 1 1 C 46 43 89 037972 C 1 0 1 T 47 46 93 038475 A 1 0 1 T 47 46 93 038966 C 1 0 1 G 45 46 91 038967 G 1 0 1 A 45 46 91 039196 C 1 0 1 T 45 46 91 039253 T 3 0 3 C 43 46 89 039308 T 1 0 1 C 45 46 91 039437 A 1 0 1 G 45 46 91 039743 A 0 2 2 G 48 44 92 039756 C 6 5 11 G 42 41 83 039788 G 3 0 3 T 43 46 89 040077 A 3 0 3 G 45 46 91 040322 T 18 1 19 C 28 45 73 040638 T 1 0 1 C 45 46 91 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 009184: CTC 010843: TA 011099: AGAAAGTATTT 012432: G 012824: C 015488: acaa 015598: a 020989: t 021903: GTTTTGTTTT 023184: TGAATGAGAC 025753: GGATTACAGGCGTG 026630: T 027656: ag 029916: CT 034731: CA 036733: agg Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 012780 T 7 0 7 G 15 1 16 C 20 43 63 028931 C 3 0 3 G 5 0 5 T 38 46 84