Site      Genotype1 AD-pop    ED-pop    Total-pop Genotype2 AD-pop    ED-pop    Total-pop Genotype3 AD-pop    ED-pop    Total-pop AD-chi2   ED-chi2   Total-chi2
001866    AA        0         0         0         AG        2         0         2         GG        21        23        44        0.048     0.000     0.023     
002659    AA        0         0         0         AG        1         0         1         GG        23        23        46        0.011     0.000     0.005     
002942    AA        16        9         25        AG        7         12        19        GG        0         2         2         0.741     0.517     0.473     
003297    GG        0         0         0         GT        2         0         2         TT        22        23        45        0.045     0.000     0.022     
003346    AA        1         1         2         AC        9         3         12        CC        14        19        33        0.091     2.457     0.435     
003470    AA        0         3         3         AG        4         9         13        GG        20        11        31        0.198     0.277     0.954     
003684    --        24        17        41        +-        0         6         6         ++        0         0         0         0.000     0.517     0.218     
003788    GG        23        23        46        GT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
004098    CC        23        19        42        CT        1         4         5         TT        0         0         0         0.011     0.209     0.148     
004320    CC        14        19        33        CT        9         3         12        TT        1         1         2         0.091     2.457     0.435     
004673    CC        0         0         0         CT        4         0         4         TT        20        23        43        0.198     0.000     0.093     
005347    AA        17        21        38        AG        2         0         2         GG        0         0         0         0.059     0.000     0.026     
006341    AA        0         0         0         AG        1         0         1         GG        23        23        46        0.011     0.000     0.005     
006499    CC        5         2         7         CG        9         12        21        GG        10        9         19        1.119     0.517     0.091     
008813    GG        2         1         3         GT        11        3         14        TT        11        19        30        0.107     2.457     0.577     
008853    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
008973    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
009075    AA        1         1         2         AG        9         3         12        GG        14        19        33        0.091     2.457     0.435     
009292    AA        0         0         0         AG        4         0         4         GG        19        23        42        0.209     0.000     0.095     
010327    CC        0         0         0         CG        0         1         1         GG        22        19        41        0.000     0.013     0.006     
010549    CC        22        17        39        CG        0         5         5         GG        0         0         0         0.000     0.362     0.160     
010906    CC        0         3         3         CG        1         8         9         GG        18        10        28        0.014     0.429     2.736     

Note:

AD: African_Descent
ED: European_Descent
Total: All_population
pop : population

Diallelic insertion/deletion polymorphisms are represented as:

+ : insertion allele
- : deletion allele

The + (inserted) allele for each site is listed below:

003684: AGGTGGGAATGAGTGTCC