Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000151 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000208 00000 ------------ T 0.75 1.00 0.88 C 0.25 0.00 0.12 0000 --- --- --- --- 000415 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000631 00000 ------------ A 0.50 0.73 0.62 G 0.50 0.27 0.38 0000 --- --- --- --- 000651 00000 ------------ A 1.00 0.88 0.94 G 0.00 0.12 0.06 0000 --- --- --- --- 000787 00000 ------------ - 0.33 0.00 0.18 + 0.68 1.00 0.82 0000 --- --- --- --- 001095 00000 ------------ - 0.15 0.15 0.15 + 0.85 0.85 0.85 0000 --- --- --- --- 001542 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002231 00000 ------------ - 0.35 0.00 0.18 + 0.65 1.00 0.82 0000 --- --- --- --- 002320 00000 ------------ G 0.85 0.93 0.89 A 0.15 0.07 0.11 0000 --- --- --- --- 002357 00000 ------------ C 0.68 0.90 0.79 G 0.33 0.10 0.21 0000 --- --- --- --- 002478 00000 ------------ A 0.98 0.86 0.92 T 0.02 0.14 0.08 0000 --- --- --- --- 002697 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003395 00000 ------------ C 0.41 0.72 0.57 T 0.59 0.28 0.43 0000 --- --- --- --- 003855 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003866 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 012483 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012690 00000 ------------ G 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 013007 00000 ------------ T 0.71 1.00 0.85 C 0.29 0.00 0.15 0000 --- --- --- --- 013271 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 013359 00000 ------------ A 0.69 1.00 0.84 G 0.31 0.00 0.16 0000 --- --- --- --- 013956 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014276 00000 ------------ A 0.72 1.00 0.86 C 0.28 0.00 0.14 0000 --- --- --- --- 014331 00000 ------------ T 0.74 0.93 0.84 G 0.26 0.07 0.16 0000 --- --- --- --- 014761 00000 ------------ G 0.40 0.67 0.53 A 0.60 0.33 0.47 0000 --- --- --- --- 014821 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014970 00000 ------------ C 0.98 0.78 0.88 T 0.02 0.22 0.12 0000 --- --- --- --- 015009 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 015170 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015589 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 024141 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024161 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024264 00000 ------------ G 0.70 1.00 0.85 A 0.30 0.00 0.15 0000 --- --- --- --- 024305 00000 ------------ A 0.70 1.00 0.85 G 0.30 0.00 0.15 0000 --- --- --- --- 024515 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024521 00000 ------------ A 0.94 0.96 0.95 G 0.06 0.04 0.05 0000 --- --- --- --- 025225 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 025441 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 025526 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025582 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 025717 00000 ------------ A 0.70 1.00 0.85 T 0.30 0.00 0.15 0000 --- --- --- --- 025728 00000 ------------ - 0.18 0.07 0.12 + 0.82 0.93 0.88 0000 --- --- --- --- 025768 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 033195 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033794 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 033947 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033964 00000 ------------ C 0.98 0.78 0.88 A 0.02 0.22 0.12 0000 --- --- --- --- 033977 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 034162 00000 ------------ C 0.94 0.52 0.73 G 0.06 0.48 0.27 0000 --- --- --- --- 034214 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 034425 00000 ------------ G 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 034982 00000 ------------ - 0.00 0.04 0.02 + 1.00 0.96 0.98 0000 --- --- --- --- 035012 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 035051 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 035406 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035425 00000 ------------ T 0.98 0.78 0.88 A 0.02 0.22 0.12 0000 --- --- --- --- 039164 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 039426 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039461 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 039542 00000 ------------ G 0.71 1.00 0.84 A 0.29 0.00 0.16 0000 --- --- --- --- 039928 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 039971 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 040043 00000 ------------ T 0.96 0.52 0.74 G 0.04 0.48 0.26 0000 --- --- --- --- 040166 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 040324 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 040526 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 040826 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 041522 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041634 00000 ------------ G 0.72 1.00 0.85 T 0.28 0.00 0.15 0000 --- --- --- --- 041748 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 041829 00000 ------------ T 0.71 1.00 0.85 G 0.29 0.00 0.15 0000 --- --- --- --- 042259 00000 ------------ C 0.98 0.79 0.89 T 0.02 0.21 0.11 0000 --- --- --- --- 042303 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042463 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042795 00000 ------------ G 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 043221 00000 ------------ T 0.93 0.95 0.94 G 0.07 0.05 0.06 0000 --- --- --- --- 043747 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 043808 00000 ------------ G 0.94 0.96 0.95 T 0.06 0.04 0.05 0000 --- --- --- --- 043991 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 044444 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 044562 00000 ------------ C 0.98 0.77 0.87 G 0.02 0.23 0.13 0000 --- --- --- --- 044628 00000 ------------ C 0.72 0.95 0.84 T 0.28 0.05 0.16 0000 --- --- --- --- 044649 00000 ------------ A 0.97 0.86 0.91 G 0.03 0.14 0.09 0000 --- --- --- --- 044755 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 044864 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 044874 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 045016 00000 ------------ G 0.70 0.80 0.75 A 0.30 0.20 0.25 0000 --- --- --- --- 045074 00000 ------------ - 0.92 0.95 0.94 + 0.08 0.05 0.06 0000 --- --- --- --- 046635 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 047399 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 047746 00000 ------------ - 0.33 0.00 0.18 + 0.67 1.00 0.82 0000 --- --- --- --- 048083 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 048117 00000 ------------ - 0.71 1.00 0.85 + 0.29 0.00 0.15 0000 --- --- --- --- 048499 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 048700 00000 ------------ C 0.73 1.00 0.86 T 0.27 0.00 0.14 0000 --- --- --- --- 049179 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 049198 00000 ------------ T 1.00 0.85 0.92 C 0.00 0.15 0.08 0000 --- --- --- --- 049214 00000 ------------ A 0.71 1.00 0.86 G 0.29 0.00 0.14 0000 --- --- --- --- 049601 00000 ------------ A 0.69 1.00 0.84 G 0.31 0.00 0.16 0000 --- --- --- --- 050158 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 050349 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 050681 01059 3' UTR T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 050862 01240 3' UTR - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 050974 01352 3' UTR C 0.67 1.00 0.84 T 0.33 0.00 0.16 0000 --- --- --- --- 051913* 051983 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 052326 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 052387 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 052438 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 052705 00000 ------------ A 0.68 1.00 0.84 G 0.32 0.00 0.16 0000 --- --- --- --- 052732 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 052826 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 053133 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 053186 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 053239 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 053342 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000787: A 001095: CAC 002231: G 012483: CTGACTATTA 025728: T 025768: A 034982: TTAT 035012: A 039928: ACTT 045074: A 047746: ACAA 048117: C 050862: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 051913 C 0.66 1.00 0.83 G 0.05 0.00 0.02 T 0.30 0.00 0.14