PPARGC1A Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
GCATTGGATA AACACAAATA AAGGTATCAG TGAATATCAC AATGGAAGAA
50
TCACATGATA ATAATTAATA AACATTGACT CTTCTTGGCC AGGTGACCAA
100
TATTATTTCA CAGTTGATC
G
TTGAGGGCAG AG
C
CAATGAC CTTTGTCCTG
150 |
var(120):[A:0.06]
|
var(133):[T:0.13]
AATTTTAATA ATTTACTGAA GTTTTACATT AAATCAGAAT ATAATTGGGA
200
AGAAAATTAG TGTTTCTTTG TGGGGAGTGC AGAGTAATGC CACTAATTGC
250
TTGTATAAAA
G
CATTCCCGA GGTTGTATTT TCCTGTTCTT TCATTAGAAA
300 |
var(261):[A:0.02]
ATTAAAACTA CAGTAATTTT CTGCTGTT
T
G
TAAAAGGGAA AATGTGCTGG
350 |
var(329):[C:0.01]
|
var(330):[A:0.15]
TGAACTGTAT TCAGCAAACT TAAAATGTCA AAGCTCTTGG CCACCTTTTT
400
ATGCCCAGTA ATGATAAACT GTCA
A
CTTCC TTACATTATT TGGGAATTTA
450 |
var(425):[G:0.14]
CTAGCAACTT GTTGCAGCTC TCACAGCACA CAAATCTCTT ATAATATGTA
500
TGGTCTGAAA GAAGCAGCAG TCTGCTGGTA TTTTGTTTCT TTTGTTCTTT
550
CTTTCACTTT AATATTTGAG CAATTTAATA TTTAAAATAT GTGTTAGGGC
600
AAATAACCAT GTTTTTCTGT TTAAGGAGAT GGACAATGAA GAACAGTGTA
650
AATTAACCTC AGTAGAATAA TGCTTTACAA A
C
TATATTTA GGTAACTGGG
700 |
var(682):[T:0.45]
GGATTGTTTT CAGGTAAATT ATTATCAAGT AAAAGAATTG AGCTGATTCT
750
AAAAGTATAT TGGGTTTAAC ATTTTATGAA AACATGTTTA TTCACACAGA
800
TACATACACG TGTACATCTC CTGGG
A
ACTT GGAAGGGTTA AGTCAGACCA
850 |
var(826):[G:0.09]
CTGTCATGTT ACAGGAAGTG TTTTTCCACT GTGTCCAGTA CCTTGAGTTT
900
GTTATGTATT CAATATGTAG TGTCATCATA AAACAGTTGC ACCTACCTGC
950
ATTAGCCCTC ATTGTCTCAA GG
T
ACAAGCT GAAAAATAAT AGAAAGTAAA
1000 |
var(973):[G:0.17]
GCTCAGGAAT TGAATATTTC TGCTAATAGT GTGTTGGTAT TTTTCCCTCA
1050
GTTCACAGAC ATTCTTGATT TCAAAACGCA AACTACACAA CCCAGGGCAC
1100
TAGGGTTGGA ATTCAATGTT TATTCAAAAA GGCACCCTAA GGCAGTTAGG
1150
GAGGAAACGC TACATGTATG AAAAATAGGA GCCGGGAATC AAAGCTGATC
1200
TGAGCAGAGC AGCAGCGACT GTATTTACTA ACACTTGTTT TCTGGGAGCC
1250
TATGAGAGAA ATGGAAATAA TTAGAAGGAA GCTGAAAGGA TGGGGTTTTG
1300
TGGCTTGTTC TCCTTATATG GAGCAAAGAA AACTGCAGCA ACTCTTCGGG
1350
AGCTGGTATT CCCTACTGCC ATGGGGGCAG CCGAATTCTG GGTGGAGGAG
1400
TTTGTTTATA CCTTAACACA TACAGGCTAT TTTGTTGATT AAACAAGCAA
1450
AAAAAAAAAA AAAAAAAAAA AAAGCCCCGT TTGCGCTTTC AAACACTCCC
1500
TCAATGAGAA AATGTCTCAT AAAAATGCAT CATGTGATAA GCTCTTGCTT
1550
TAGTCCCAAA CTGAGCTTGA GTCCACTTGG AGATCTTAGA ATTAAAGAGT
1600
TCTTAGGGAA TACACGTTTT AGCTAAGAAT ATAGTTACTC TGTCATGAAA
1650
CAGGGAGCTT TGCCACTTGC TTGTTTTGGA AGGAAAATAA ATT
A
AAAAAA
1700 |
var(1694):[T:0.02]
GATTGCAGGG GATTTTGGTT ATTATATGGC CAGGGCTCCG TTTAGAGTCT
1750
GTGGCATTCA AAGCTGGCTT TAATCACAGC ATGATGCTTG AAGCCTCCAA
1800
AAGTCTAAGT GTTTCCTTTC TTTCTTTCTT TTCTTTTTCT TTCTTTTTTT
1850
TTTTTTTTAA AGCGTTACTT CACTGAAGCA GAGGGCTGCC TTTGAGTGAC
1900
GTCACGAGTT AGAGCAGCAA GCTGCACAGG GGAAGGGAGG CTGGGTGAGT
1950
GACAGCCCAG CCTACTTTTT AATAGCTTTG TCATGTGACT GGGGACTG
T
A
2000 | Exon 1 |
UTR
G
T
A
A
G
A
C
A
G
G
T
G
C
C
T
T
C
A
G
T
T
C
A
C
T
C
T
C
A
G
T
A
A
G
G
G
G
C
T
G
G
T
T
G
C
C
T
G
C
A
2050
T
G
A
G
T
G
T
G
T
G
C
T
C
T
G
T
G
T
C
A
C
T
G
T
G
G
A
T
T
G
G
A
G
T
T
G
A
A
A
A
A
G
C
T
T
G
A
C
T
G
2100
G
C
G
T
C
A
T
T
C
A
G
G
A
G
C
T
G
G
A
T
G
G
C
G
T
G
G
G
A
C
A
T
G
T
G
C
A
A
C
C
A
G
G
A
C
T
C
T
G
A
2150
M A W D M C N Q D S E 11
G
T
C
T
G
T
A
T
G
G
A
G
T
G
A
C
A
T
C
G
A
G
GTGAGCTG GGGCAGGGCT CGGCGCTGCA
2200
S V W S D I E 18
GCCACAACTG ACGCTTCCCT CAGATGCTAT TATTCCTGTA AGGGGGGATG
2250
GGCTTGGGCA AAGAGAGGAG CCAGGAAAGT AGTCCAGGCA GGAGCTTTTA
2300
GAAGAATCTC AATCTTATCT TAACTCCAAT AAGTTTGCTA TTTTAAGGTG
2350
GCTCTGAGAT GGCTTGAGCA AATCAAAGCT TAGCTGCTGT CATCAGTATC
2400
TGTTGCAGTT AGAAACTCTT TCCATGTGAC TTTGGCACTG TTTCTACTCA
2450
TATGCAATAT TTATGCTCTA AGATATTGAT ATGAATCAGA AGCTGAAGTC
2500
TTTCCAGTGG TGTTTAGTGG CCTGGTTGGA AAAATGCCAT TTCTATTTAT
2550
AATAAGACGA AGATAAAAAT ATTAAAATGG ATGTGTTCAA ATATAGTCCG
2600
TTTTGACTCT AGTCCGGATT TTTCCCCCCT CT
C
TCTCTGT TCATCAGACA
2650 |
var(2633):[G:0.01]
GAGAACTTAC AAAATCCTAA ATAATCCTGC TGGGCTATTT TAGA
T
TGCTT
2700 |
var(2695):[C:0.05]
TTCCCACAGA ACACAAAACA ACGATGCTGC TTCCTTTAAA ACTCCTATAC
2750
GTGGTTGAAA GATTTGGCCA GCGAATAAAA AGAAACGCCT GGCAGTGCAA
2800
GGTTTTCCGT TCGCGTCGGT GGCAGGGAAG CCAATGGTTA AATCTTCCTG
2850
TACCACGGAG AGCTGCCTGA AGCTGAGAGA GAATAGAGTT TATGCAGGAC
2900
TGTGTGTGGA GCTGCT
C
GCT GCTAGTGTAA AAATAGACAG CAATACATCA
2950 |
var(2917):[T:0.04]
ATTCCACAGT CTCTGCTGGC TACAATTCAT ACAGGGGGGA AAATAACGCA
3000
AGCAGTTTCC TCGTAATCTC TGGAGTCTAG TGGGGGGACG GAGGACCTCG
3050
GCGTGTTTGC ATTCAGCACA ATGGAATGCT CTCGGAAGGA AAGTTTGGGC
3100
AACTTGGGAA ACAAGC
G
AAA CTTTCTGTGG ACTCTGGTGA GATGGACTCG
3150 |
var(3117):[A:0.37]
AATTGAATTG CATGGAGGAT CCCAGCTGCT AACAATGAAT CTGGCAAAAG
3200
ACTGCGAGTG TTTCCTCTGG GTAGCTGGGG GCACGTAGGG TAAGGGGGAG
3250
GATCAAGCCC ACACGTGATT TGATTAAATA AGATGTCCAT GTGGTGCAGC
3300
GATACACATC TAAAGTGAAA ATAATTTGGC CAAGGCCGTC TGTGAATGCA
3350
TTTTTCCTAT CTAGCGAGGC ATGCCCGGGA TTCTTAACTC TTTGCTGGGT
3400
TTGCAAATGT TGGCTCCATT TGCCCTCCCT TGCCTTGGTA GATCGTATTT
3450
GTGGATTGTA ATTGTTATCT TGTTCTGATT TCTTGGTAAG GCGGAATAGA
3500
TATGGATAAT TCATATGCCC TGTAGCCATT ATGAGTCAGG GTTATAAGTG
3550
GCTTCAAAGT CCTAATTGCC TTTGAGTAGC CGGAGTGTCC TGTGGGTGGT
3600
TGTCTGGCTG GCACTGTGGG TCTCAGCTGC TGTAGTTTCA TT
T
T
T
C
C
A
T
C
3650 |
NOT SCANNED
A
T
G
T
A
T
T
A
T
T
C
C
T
G
A
T
G
C
T
G
T
T
A
G
G
A
G
T
T
G
A
T
T
G
A
G
G
A
A
C
T
A
G
A
T
C
A
T
A
T
3700
G
G
A
A
A
T
A
A
G
G
A
A
G
A
T
T
T
A
T
T
T
T
A
A
T
C
A
T
T
G
G
A
A
T
T
C
C
T
G
C
A
G
T
C
A
T
T
T
T
C
3750
A
A
A
T
A
A
A
C
A
T
C
A
G
A
A
G
C
A
T
T
T
A
G
A
A
T
A
G
T
G
G
C
C
T
T
T
A
A
A
T
T
T
T
T
T
T
C
T
T
A
3800
A
G
G
A
G
G
A
A
A
G
G
T
C
T
T
G
G
C
T
A
C
T
T
G
T
C
C
A
G
C
C
A
T
G
G
A
T
A
G
A
G
T
C
G
C
C
A
G
T
C
3850
G
G
C
T
G
A
G
A
T
T
G
G
C
C
A
G
T
C
A
C
T
T
C
T
C
T
G
T
T
G
C
A
C
T
A
T
A
G
G
C
A
G
C
T
A
G
C
T
G
C
3900
T
A
G
A
A
G
C
T
T
T
G
C
C
T
A
C
A
T
G
G
C
A
G
C
G
G
C
T
C
T
G
G
G
A
A
T
C
A
C
C
T
C
C
G
C
C
T
G
T
A
3950
T
A
A
A
A
T
A
T
T
A
C
G
A
G
C
A
G
C
A
G
G
T
A
G
C
G
T
T
G
G
C
A
G
T
T
T
T
C
A
T
T
T
T
T
T
G
A
A
T
C
4000
A
T
T
A
A
T
G
T
T
T
G
C
T
G
T
C
A
T
C
C
T
A
A
A
A
C
G
T
A
T
T
A
T
G
C
C
C
T
T
T
T
G
C
A
C
A
T
A
A
T
4050
G
A
C
A
G
G
G
T
A
G
T
A
C
A
T
T
G
G
T
T
A
A
T
A
T
A
G
G
C
C
T
A
T
A
T
C
A
C
T
A
T
A
G
C
T
A
C
T
T
G
4100
G
A
G
T
G
C
C
C
C
G
T
G
T
T
T
C
A
C
A
G
T
T
T
A
A
T
G
A
A
G
G
T
G
A
T
A
T
A
C
A
G
T
A
A
G
G
T
T
A
C
4150
T
A
A
G
A
T
T
G
A
T
A
G
A
G
A
C
A
A
T
T
C
A
C
A
T
G
A
C
A
T
A
C
A
C
C
C
C
A
C
T
A
A
G
A
C
T
G
T
C
A
4200
T
T
C
T
T
T
A
C
T
G
C
C
C
C
T
C
T
C
T
C
C
A
C
C
C
C
C
T
T
T
C
C
C
C
T
G
T
C
T
T
A
A
C
T
A
A
T
T
T
T
4250
T
T
T
A
A
G
A
A
C
C
C
A
G
T
T
T
C
T
T
T
T
T
T
C
A
T
T
A
A
T
A
T
A
A
T
T
A
A
T
G
T
G
G
C
C
A
A
G
T
C
4300
C
A
C
T
C
C
T
T
C
T
T
C
T
C
T
C
T
C
T
C
T
C
T
T
T
A
A
A
A
T
T
T
A
C
C
A
T
C
A
A
T
G
G
C
A
C
A
A
A
A
4350
A
C
C
T
C
C
A
A
A
A
G
G
T
T
A
A
T
G
G
A
G
A
A
T
T
A
T
A
C
T
T
A
A
T
T
A
T
A
A
T
G
A
T
T
C
A
T
T
A
T
4400
C
A
T
C
A
G
T
G
C
A
G
T
T
A
A
G
C
T
A
A
T
T
T
A
T
T
G
T
C
T
G
C
T
C
C
T
T
A
A
C
T
A
A
G
A
G
A
A
A
A
4450
G
T
C
T
G
T
T
G
G
G
G
T
G
A
A
A
T
A
A
C
A
T
A
C
A
A
T
A
A
T
T
A
G
C
C
T
T
T
T
G
T
G
T
T
T
A
G
T
G
A
4500
C
T
G
C
T
T
T
A
T
C
C
T
C
T
T
A
A
A
T
C
T
T
A
T
T
A
T
A
A
A
A
T
T
G
A
G
G
C
T
A
C
A
G
T
T
G
T
G
A
A
4550
A
T
A
G
C
T
G
T
C
A
T
A
G
T
T
G
C
A
A
A
G
A
G
G
C
A
G
T
A
G
A
A
T
G
T
G
T
C
T
G
T
G
T
A
A
T
T
G
C
A
4600
A
T
A
A
A
G
C
A
C
A
C
C
T
G
T
T
A
C
A
G
A
G
G
T
A
T
A
G
G
G
A
A
A
C
A
G
T
A
A
A
T
A
T
C
A
G
C
A
T
G
4650
T
C
A
G
A
T
G
A
G
G
A
C
A
G
T
T
A
C
A
G
G
G
C
T
T
G
G
A
C
T
G
T
T
A
A
G
T
C
T
G
G
C
A
T
T
G
T
C
C
A
4700
A
A
G
G
C
C
A
A
A
T
A
T
A
A
A
T
T
A
A
T
A
A
C
A
G
G
A
A
C
A
C
T
T
G
C
T
A
C
C
A
C
T
A
A
T
G
T
G
T
T
4750
T
T
A
G
A
T
T
A
G
C
A
G
G
A
T
A
A
T
G
C
C
A
C
A
T
T
C
A
G
A
A
G
C
A
C
A
G
A
T
T
T
T
A
T
T
A
G
C
A
T
4800
G
T
C
A
A
C
A
T
T
G
G
C
A
A
G
A
A
C
A
C
A
T
G
C
A
C
T
T
T
T
C
T
C
A
A
C
C
A
T
A
A
C
A
T
A
A
A
A
G
C
4850
A
A
A
A
T
G
A
G
A
G
A
G
A
G
A
G
A
G
A
G
A
G
C
G
C
A
C
G
A
G
C
G
A
A
C
A
A
G
T
G
A
G
A
G
G
A
A
G
G
A
4900
A
A
G
G
A
A
T
A
T
G
T
A
A
A
T
G
A
C
A
A
G
A
T
A
G
C
A
C
C
A
A
T
A
C
A
A
C
A
A
A
T
T
G
A
C
C
T
G
G
T
4950
C
T
T
T
T
C
A
A
T
G
G
T
T
T
T
C
A
A
A
A
G
T
T
A
T
T
T
A
A
A
A
A
T
A
C
A
T
A
T
T
T
A
T
G
G
A
A
G
G
T
5000
T
A
A
A
G
G
G
T
T
A
T
G
A
G
C
A
A
G
T
C
A
T
G
C
C
A
A
A
G
A
G
G
G
C
A
G
T
T
A
A
A
G
A
G
A
G
G
G
A
C
5050
A
G
G
A
A
G
A
A
G
T
T
G
T
C
C
A
C
A
A
A
T
C
A
G
T
A
T
G
C
T
A
C
T
T
T
A
G
C
A
T
T
C
C
A
A
A
A
C
A
T
5100
G
G
T
T
G
G
T
T
C
C
T
A
A
G
T
T
T
C
A
C
A
A
C
A
G
G
A
A
C
T
T
A
A
G
C
C
A
T
A
T
G
T
A
G
A
C
A
G
C
C
5150
T
A
C
A
T
T
T
T
C
T
T
G
A
T
T
A
T
T
T
T
T
A
C
T
T
T
T
G
T
G
T
T
G
C
T
A
T
T
T
T
T
G
T
T
G
T
T
C
A
T
5200
G
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
A
A
A
G
A
C
T
A
T
G
C
C
C
C
T
A
T
A
A
A
A
T
C
C
T
A
G
T
G
T
A
5250
T
C
T
T
G
C
A
C
C
G
T
T
G
A
A
A
A
A
G
T
T
C
T
C
C
C
C
C
A
T
C
T
C
T
G
A
A
T
T
G
G
T
G
A
C
A
T
T
G
A
5300
G
G
A
A
A
A
G
T
T
A
A
G
A
T
A
G
T
G
T
G
T
T
T
G
G
G
C
T
T
G
G
A
G
G
A
T
C
A
G
C
TGTGTGGGCA
5350
AGAATGGAGT CTGGGCAGTG TTACATCCAC AACCAAATAT GAGCATTGTA
5400
CCAGAACGAG ATCTCTTCAG CCCAGCCTCC AGTTACTTAT ATGCCTTGTC
5450
AAGTATACTG ATCTGTAATT TTGGGCTAAC TCAGATAATA AAAGGAAAGA
5500
CCAATAAAAT GATAAGGAAA GAGTTTTGAT GGTGAGGAGG GCCCTTTCTT
5550
TGCATTCCCT TGTCCCTGCT GCCAGGGATC TCACTGGGGT CCAATGGTCT
5600
TAGAGAAGGA TGGCAATGAT TTTCAGTCTC CCCCCATCCT CCCCTTACCA
5650
ACTGCTGACT CCATTACCCA GTACTTACTT CTCAGCGTGT TGCTTTTGAT
5700
CACGCTGCTG CATATGACCT GTGTAATGTG GCCTGCTAGG AATCCCTGCC
5750
AGGGATAACA GGGGTGCTTG AGAAAGAAAA TCTGCATAAA ACTTATTTCA
5800
TTCAAAATGT AAATGTCAAG GA
G
CATCTTT CATTTTATGC CTAACTGCAG
5850 |
var(5823):[A:0.01]
CCTGGATGTG AACAATTCCA CAGCATCTCT CCTGACCTTG GAAGGCAGGG
5900
CCATGAGGGT GCTGCGTCAG TGTGTGCCTC CTGATTTAGA CACCCCCACT
5950
TACAGGTGGA TGAAGTCCTT ACTGTTCTGG CAATGCCAGA CCCCTGCAAT
6000
AGGAGTTCCT GCAGTGTTCT TTACTGTCTG CGGACTGACA TTAGCGGTTA
6050
GGTAGCCAAT TCAAGTTTAG GAGACCACCT CATTGGTAAG GGGAGTCCAC
6100
TTGCCTCCAA AAGCCGCATG GTAAAACAGT TAAAAAGACT GTCTATTTCA
6150
TGTAAGGGGA
T
GAAATGCTT TGACAATCTA AAATAATCTT GGTGATAAGC
6200 |
var(6161):[C:0.01]
AGCCCAGCCA TGGTAGAGAT ATTTTAAACC TCTCAATATG TAGA
A
ATTAT
6250 |
var(6245):[C:0.17]
TTTAAAACTC TAAACAAAAA TAGTTATTTT GAATTCACGT AGAGCACAGT
6300
TTAGATATAC ATAAATAATG AACAAAATAT AGTGATGGTA TGCTATTGTG
6350
AGTTTTCTTT TCCAGGTACT AGGTGATTCC AACCGTACAC ACACATAC
G
T
6400 |
var(6399):[A:0.33]
GTGCAAACAC ATACACACAC ACACACACAC ATCTTGCAAG TTAC
A
TACAA
6450 |
var(6445):[G:0.13]
AAGC
C
GTATA GAAAAAAAAT TATGATTTTT GTCCTTCATC TTAAGGAACT
6500 |
var(6455):[T:0.01]
TGCTTTTGCC TTTAAGGATG AAGTCCAGAA AGTCATGAAG AGTCAAATAA
6550
GAGTAAATGA TTTAAATAAC AATTCAGGAG AACCACAGAT GAGTCAAAGG
6600
GCTTTGCATC ATTAGTTGCT AAATGAATTA TTTGGATTAT AATGCTTAAA
6650
AGGAGTGTAA ATGGAGAAAA TTTTTCCTAG TGTAGTTCCT CTGTTCTTTT
6700
TCCATTTAGC AATAGTTTAT TGAGTGTCTA TTATGTGTGA TAAAATTTCC
6750
AAGGTAAAAT CAAGTTTGTA TTATGGTTAA CTATAAGACA GTTTAAAACT
6800
TTGGAAGCAG TAACTATCAA ACAGGTATCA AGGATTTTGT ACAAAGAGGT
6850
CCAAAAATAT CTAGTTGATT TCTAACTGGA AGAATCAGAG AAAGCTTCGT
6900
GGAGCTTGGT ATTTACCATG TGTTTGGAGG TAGCTTTTGG ATGGAATAAA
6950
GCAGGGAAAT TATCCTTCAG GAGCCAAGTG AGTAAAGATT TTAGGATGTT
7000
TTTCCTGGTG ATTAAAGTGC CAGAAACTAG CTTTGGTAGT GTAGTTGAAT
7050
TAACTAGGCT TAATTCCTAT CACATGCTAT TGCAGTTTAA TAAATTCCTG
7100
TGGTTAATGG AAGCTTTTTT AAATTTTTTT TTTCTGCCTC CTGCAG
T
G
T
G
7150 | Exon 2
C 19
C
T
G
C
T
C
T
G
G
T
T
G
G
T
G
A
A
G
A
C
C
A
G
C
C
T
C
T
T
T
G
C
C
C
A
G
A
T
C
T
T
C
C
T
G
A
A
C
T
T
7200
A A L V G E D Q P L C P D L P E L 36
G
A
T
C
T
T
T
C
T
G
A
A
C
T
A
G
A
T
G
T
G
A
A
C
G
A
C
T
T
G
G
A
T
A
C
A
G
A
C
A
G
C
T
T
T
C
T
G
G
G
7250
D L S E L D V N D L D T D S F L G 53
T
G
G
A
C
T
C
A
A
G
T
G
G
T
G
C
A
G
T
G
A
C
C
A
A
T
C
A
G
A
A
A
T
A
A
T
A
T
C
C
A
A
T
C
A
G
T
A
C
A
7300
G L K W C S D Q S E I I S N Q Y 69
A
C
A
A
T
G
A
G
C
C
T
T
C
A
A
A
C
A
T
A
T
T
T
G
A
G
GTAA GGACATCCTT TGGAAACATT
7350
N N E P S N I F E 78
AATTTTTCAT TGAGTTTGGC TTGGGCC
C
G
A CTAACATGGT AATAGACCTG
7400 |
var(7378):[A:0.34]
|
var(7379):[A:0.01]
AATGCATAAT GAGTTCTTAC TTTGCTATCA TCAAAAGACT TTTCATCACA
7450
GTTACATACT TTCTAATTTA TGGAAAAACA GCATTTGGAA AACAAATGTT
7500
TTGTTTTTAT TTTTTTAAAG ATTTAAAAAA TAAATCAACT AGGGACTAGG
7550
AATCAACAAC TGTGAGTGA
G
TTAAACTGTG TTGAAATACT AAAGGGTTGT
7600 |
var(7570):[A:0.06]
GAAAGATTAG TGACAAAGAA GAACAAAAGT CTAAACCTGT TTATTCCTGT
7650
CTATTTCCCA CAGAAAGAAT GAGCAATAAA TGGTACCTCA TATAAATTAA
7700
TAAATAAGAA GGCCTTTCTT TTTAACCAAG GGGGTAGATG TCTACCTTTG
7750
TTTGCTTTAC TAATTAGGTG AGCTCTTTTG ATTATTATTA TTAATTATAT
7800
TTTTGGTTCA TATCTCTAAT TTCTTTATAT AATGGGAATT GCTAAACTTG
7850
ACTAATCTAC TGTATACTTA TAAATCAGTC AAAATTCATT TACTTTTCAG
7900
TAGCAAGAAT TACCTCCGTG ACTCCGGACT CTTATTATAA GCCTACCCTA
7950
TAATAAAGAA TGTTAATCTA TTCCTATTAA AGTGTTACTT TGAGAAAAGG
8000
AATTCTTTCC CACAAGATCA GTACTCATTT ACTTGAAATA CATTATTTTT
8050
TATAGGAACA AACATTTAGT GAGTACTCTG GCAAGTGAAT TAAACGAAGG
8100
ATGACATATC GGCTAGTTTT CTTTATCACA AC
C
GCCAGTG CCATCA
T
C
A
T
8150 |
var(8133):[T:0.06]
|
REPEAT
C
A
T
C
A
T
C
T
A
A
T
G
T
T
T
T
C
T
G
A
G
C
A
C
C
T
A
C
T
A
T
G
T
G
C
T
G
G
A
C
TTTTCTTATT
8200
CATCA
G
CAAA GACATTTCTT ATACTTCCAT GTTATTTGGT TGAAATCTGA
8250 |
var(8206):[A:0.14]
GTCTTAAGAA AGCCAAGTTT AAAATATTAA CTGAGTTTTG CTGGAA
C
C
C
A
8300 |
REPEAT
G
C
A
T
A
T
A
A
T
A
C
A
T
G
C
T
G
A
A
T
A
A
A
T
G
T
T
T
G
T
T
A
A
A
T
CATGA GAGAATGATG
8350
AATATATTAA TGTTGATAAC AATAATAGTA ATGACAATAA TGGCCAACAT
8400
TTTGGTATAC TCAT
G
C
T
T
A
A
T
A
T
A
T
G
T
C
A
T
C
T
C
A
C
T
T
A
T
C
C
T
T
G
A
A
A
A
C
A
8450 |
REPEAT
A
C
C
T
A
T
T
G
T
T
A
G
G
T
C
C
T
A
T
T
G
T
T
A
T
C
A
T
T
C
C
T
G
T
T
T
T
A
C
A
T
A
T
G
C
A
G
A
C
A
8500
C
T
G
A
A
A
C
T
C
A
G
A
G
A
G
G
T
T
A
T
T
T
G
T
T
T
T
C
C
C
C
A
A
A
T
C
A
C
A
C
A
G
T
T
G
A
C
A
A
T
8550
A
A
A
G
A
C
C
T
G
G
G
A
T
T
T
G
A
A
C
C
C
C
A
A
A
T
T
T
A
T
C
G
G
A
C
T
T
C
A
A
A
G
T
T
T
A
T
A
T
C
8600
C
T
T
G
A
TAAAA ATAGAGAACC CATGAATTTG GGTGACAGCC ATCCTTTACA
8650
AAGACATATC AAGCTGCTTC TTTGCTCAAT ATATTTAAAA ATAGAACAGA
8700
ATCTTTCCTT TCAGTGTTGG TTGGCAC
G
GA GGTAGAGTTA GCTGGTGAGC
8750 |
var(8728):[A:0.02]
CGAGA
C
GGCT GTAGGTTCTG CCTATGGCTG AGATTTTGTA ATACCTCTGG
8800 |
var(8756):[T:0.10]
AGATTAAGTG GGTTTTAGAA GAATGCTTAA GGTAGTAGAG TTTGGACTGG
8850
GGAGACAGAA CAAGGTGGAG GGAACACTGA AGG
T
TGTGGT TAGTTCTACT
8900 |
var(8884):[C:0.07]
TTCCCAGGCT TCTCAGCCGG GTCTTAGAAA GTTCATGTGA GGACTTGGCC
8950
AGTTAGAACT GGTAAATTGA ACATTCCTCA CTCAGTACA
C
TTGTCAAGTT
9000 |
var(8990):[T:0.09]
ACAGGCCCAT TCTAAGTCAT GCTGCATTAA ATAAACAATG CTTTAAAAAA
9050
TGTCCATCTC CATAGACCTC TTATCTAAAA ATCACCTATT TCATATCAGG
9100
TGAATGCCAT GCATTTTGTA GAGGCTAGAG AATAACTTAG CGGTAGGGGA
9150
GATGGCATAG GAGTCAATGC CTCTCTGGTG GGCTACTTTA AAAAAAATAC
9200
AACTTTCTCC ATAACTTTTA TGTCCCTATA TTTTGTGTTG TGGTATTTGT
9250
GAGAGGTACT TTGCATTTAT ACCTTCAGGA GACTTGGTTC AGCATCTAGT
9300
TAATTATCTA CATGTAGGTG CTTAATATAT GCCATGCCAC CCTTTTTGTC
9350
TCCCTGTATC ATATTCTATG CTAATAAAAT TATTTTCAGC ACTCTAAAAC
9400
AGAAGTTCAT TTAATTTAGT CTCTCATTAG GTCATTTTAA AC
C
A
A
T
G
A
T
T
9450 |
REPEAT
C
T
C
A
A
C
C
A
A
A
G
G
C
G
A
T
T
T
T
G
G
T
C
C
C
C
G
C
C
C
C
A
C
A
C
C
C
C
A
A
T
T
C
A
C
G
G
G
A
C
9500
A
T
T
T
G
A
C
A
A
T
A
T
C
T
G
G
A
G
G
C
A
T
G
T
T
T
G
G
T
T
G
T
T
A
T
C
C
C
T
G
G
G
G
A
C
A
A
G
G
G
9550 |
NOT SCANNED
G
A
T
G
C
T
A
C
G
A
G
C
A
T
T
T
A
T
T
G
A
G
T
A
G
A
G
A
C
T
A
G
A
G
A
C
A
A
G
G
A
A
T
G
C
T
G
C
T
A
9600
A
A
C
A
T
C
C
A
A
C
A
G
C
C
T
A
C
A
G
G
A
C
A
G
C
T
C
C
C
A
C
C
A
C
A
A
A
A
A
A
T
G
A
T
T
C
A
G
C
C
9650
T
C
C
A
A
T
G
A
A
A
A
A
A
G
C
A
C
T
G
A
G
G
T
T
G
A
A
A
A
A
C
C
C
T
G
C
T
T
T
T
A
A
A
T
A
A
A
G
T
C
9700
A
C
A
G
G
C
T
T
C
C
C
C
T
T
T
A
T
A
A
A
T
T
A
C
T
A
A
T
G
A
T
T
A
A
T
T
G
G
T
C
A
G
A
T
T
T
C
T
G
A
9750
G
A
G
A
A
G
A
C
A
T
A
G
T
A
A
G
C
T
A
C
T
G
G
A
T
A
T
A
A
A
G
A
A
T
G
A
G
A
A
G
T
C
G
T
A
T
A
A
C
G
9800
A
T
A
T
C
G
G
G
A
T
G
C
C
T
G
G
G
G
C
T CCAGGACTAA TATGTCAGGT ATCCTCTTAG
9850
TGTCAGAGGG CAAAAGTGAC TGTTTAGGTA AGTTCCCATA ACAGTTTTCT
9900
CTGATGTCAC AAAGCCCATT CTTTATCGAG GCAAAGGGTA AAGTCATATG
9950
TGGCAATGCC CTTACCAACA GCAGCAGCTT CAGGAGTATT TGCATGGCAT
10000
GAGGACACCT CCACTCTTTG CCCTCTAGTG TTAAACTCAG GCATCTTTTC
10050
TGTAATGTGA AAGGAAAGCG TGTTTTCAGC ACAGGTGACA TTCTAAAATT
10100
GGGTCTTCCC TGTGAAGAAG GTTCGTATGA AACCAGATAA CTCTTTCATG
10150
GCCACAGGTT TGTGTTGCTT CTACCAAAGC AGCATTTCAG GGAAGTGCCT
10200
TCCCAGGGCC GGCCACTCAC AGTGGACTTT TCACCTGCAC TCACCTTCTT
10250
CCAATTTGCA AAGCCCTGCC TCATCACATT TGAGAAGGCC TTGTACTTGA
10300
GTAAGTTAAA CAGTCACGGG CTCTGCTGTC TCTGATCTGA CAATAACAAG
10350
CATTATCTAC TTTGGATTCC CAGAATAAAA TCAGGCACTG AGTAGTTAAA
10400
TGCTTTTCCC TGACTCAAGT AGCAC
G
TCAA TGACACCACT GGAAACTGGC
10450 |
var(10426):[A:0.04]
CATCGACTGA ATTCTCATCA AAGCAGAAAG TGGGATTTAG GGATATATAA
10500
TAGAGTGGCA GAGTCTTAAA ATGTTGAGAG TAAATTATGT ATCTCTTCTT
10550
TTTGTTTCTT CCATATGTTT GAATCTAAGT TTAATTTTTA TTTAACATCA
10600
CAAACTTAAT AATGATAAAA AATGAAGCTG AATGTCACAA TTTGAGAAAG
10650
GGAATTCTGG GTGGTGGCAG AGGGGTAGCA ACATGCAATA GCACATGTTG
10700
GTTGAGTAAC TGGACACGCA AACAATGTTC TCTGCTTACG CAACCTGTGT
10750
TTGGATGTGT AAATGCAGGT GACCAGGTAC GATTCAGAAG CCACTTTAAA
10800
AAACAAAGCA AAAGGCTCAG AGGTAACAGC CTCCAGTGAA TCTGATCCAT
10850
GTGTAAGGAA AACAGGATGC GTCCCTGGAC CGGCTGGTAG CAAGATTTAT
10900
GTTTCAGAAT ATTGCAACAT AACTTCCTTC CCTCTGTTGC CTTTGTGCAT
10950
TGTTTGAAGG AGGAGAATAA AGGACTACTT TTGCAGCACA GCAGTCTGTA
11000
AAGATGGATG GCATGGGGTT AGTTTAAATA GCATATTGGC CTTTCTGGGT
11050
CACTGTGGGC AACCTTGTCC CTGGTTTATT TTAACACCTG CTTTAATGCC
11100
TCCATGATAC AACTGAATGG GCATCTTTCA TTCATTCGTC TGTTACTTCT
11150
GAATGAAGCT ACTTGGGGTT CGTTAGAATG A
T
GGCAAGTG AGAATGCAGT
11200 |
var(11182):[C:0.18]
CGTCTCTAGG TCATTACTTG TAATACGTTC TGAGGACTGC CTTTGCTGAT
11250
GGGGGGAGAA GGACTCTCAC AGCTGTAGCC AGCGTTCATG TTTGGTC
A
TT
11300 |
var(11298):[G:0.10]
GCTGGAACTC TCAGGAAGCC TGAAACTGTG AACTTTGTAG CAGAAAAGGG
11350
TGAGTGGTGG TTTTGTATTT GTGTGTAAAT TATCCTGCTA TATGCAATCA
11400
AGGAAATGAA TGTGGACGCT TTCAAGGCTA CTTGGTTATT CTAGTGGGAA
11450
TATAGATACT TTACTTTTCT TCATTTGGCT TTCAGTTATA TTCTAAATTT
11500
TGCAAAAATG GACATATATT ATGTACCTAT CAAAAAGTTA AAAATAACAA
11550
ATATTGGCAG TTCAACAGAC CATGAGCATT
T
G
A
G
G
A
G
T
A
G
G
G
A
A
T
C
T
G
C
C
11600 |
REPEAT
T
G
T
C
T
T
G
T
T
C
A
C
T
G
A
C
A
T
T
T
T
T
C
T
A
G
A
T
A
T
T
T
T
C
T
C
A
G
A
A
A
A
T
A
G
C
A
G
A
A
11650
A
G
T
A
A
G
A
A
C
T
C
A
A
C
A
A
A
T
A
C
T
T
G
T
T
G
C
A
T
A
A
T
G
A
G
T
G
A
G
T
TGATCTTCAT
11700
GTGTTTATTG ATAGAATGAA CTG
C
GTTAGG TAATGTGAAG ATTATATACA
11750 |
var(11724):[T:0.02]
AA
G
CACAAAA GAAGGCCTGT GTCCTAAAGG ACTTTAAATC TAGTTT
G
GGA
11800 |
var(11753):[A:0.05]
|
var(11797):[T:0.04]
GGCAAAATGA ACAAATGTAA AACAATTAGG AAACCATGCA AGGCTGTGTA
11850
TACAAATATA CAAGTATATG CATATGTTTT TAGTTCTTAG CAATTCGAAA
11900
ACAATACAAG ACTGTATATT CATGTATATG TATATATGTG TATGTACCTA
11950
CATAGGATTA TATATATATT TGCAATTTGC AAACATTGCG AGCTCGTGTA
12000
TGCATATATG C
T
ATGCATAT ATATGTGTGT GTATGTATGT GTATTTCTAG
12050 |
var(12012):[:0.84]
CTGAGGAGAT AAACAGCAAG AATAAATTCA CAAAGCCTTG TAAGAGAAGA
12100
GCAGAGCGTT TTCATAGACG GGATGTGGAG GTGAGCTTGG TTTACTCAAA
12150
GTAAAATACA TATTAATGGG AACGTGGCAG TAGTGGGAGT AAGTTTGGAT
12200
GTAAGGTAGG TACAAAATTA CGGTGGGTCA TGAGAACCCA GTTGGAAATG
12250
TTTAGAGTCT GTTTAGAAAG TAGGATGTCA TTGAAGATTT TTTAGCAGAT
12300
CAACATAATG GAGGTGGTAT TTAAGAGTGA TAATGCTGAC AGTCGTAAGA
12350
GGT
G
TAGGCA AGTAGGAAAT ACGGAAAATC AGACAGCAGG CAGTGCTGCA
12400 |
var(12354):[A:0.29]
TTCCAAACCC AATGTGATAC AGGTACAGGG AAGGGACAAG GTGATAGCAG
12450
AGGGGGTGGC ATTCAGGGAA CAGATTCAAA GTACCTTGAA GGAAAATTCC
12500
ATCAGCCCTG ATAACTCTGA GTTCGGATAG AGAGAGAGGT GGTAAGGAAT
12550
GCTAACTCAA AGATATTCCA AAGAGAAGC
A
GAACCTCGTG GATATCGTTC
12600 |
var(12580):[G:0.14]
CTGGTTAAGT TTCTGCTCAC CTTTAGGAGC TGAAGTACTT TCCTAGA
C
TC
12650 |
var(12648):[T:0.19]
GTGAGTCATT TTACAAAGGG GCCCTCTATC TTTCCACTGC CTCAGGGACA
12700
GAACATATTT AACCCA
A
TCC ACAAATTTAC GTGGTGTCTG CTTTTTTTCA
12750 |
var(12717):[G:0.12]
CTTGTCTCCT TGGAGGAAAT CCTGCAGCCT TCCATGGTAA TGAATTCCTG
12800
CTTCTGACTG TGCCTGTGGT CAGACAGACT TTTCTATGAA TGGCAAACCT
12850
CCTGGAATTT TAACAAAACA AATAGACAAG AAAAAAAGAA TGCATGTATA
12900
TACAACCTCA CCTTAATTTA ATCATTGGAA GAATAAATTC TTTTTTGTTA
12950
TGTGGGAGGA CTGAATTAAT TTACAATAAT CACTTTTATA AGATTTCTGG
13000
GATTTCCAAT TTGCAATCAA TAAATGTTTG TCATTTAAAT TAAATTTACG
13050
GCCCACAGCC AGATTTTTGC CACACTTGGT AATGACACTT ACAGAGAACA
13100
TAGACTTCAA GTAAGAAAAT AATAGCCATT TAAGTGGAGA GATAATTGGC
13150
TGTAACATAA GAACATTGAA GAATGTTGAA ACTCAT
G
GAG ACTTATGGAG
13200 |
var(13187):[A:0.33]
TATTTTAAAA ATTTATGTTG TACTTATCTT TGCATTTGTA GTCTACCACA
13250
AAATTCCAAA TTCTGGGTAT AAATCAGTTA GATGTTCATC TTGGAGAGTC
13300
ATAAATCAGG AAGCA
A
C
A
A
T
C
T
G
A
C
C
C
A
G
C
C
T
G
T
G
T
G
C
T
G
C
T
T
T
A
T
T
T
T
C
13350 |
NOT SCANNED
A
G
C
C
T
C
T
C
C
T
G
T
C
G
G
C
T
T
A
T
C
T
T
G
C
A
G
G
G
A
G
A
C
T
A
A
A
T
A
G
T
G
T
T
G
T
T
C
G
T
13400
T
T
G
T
G
T
G
T
G
T
G
T
G
T
G
T
T
C
A
T
C
T
A
C
A
C
A
C
C
T
C
A
T
T
T
A
A
G
C
A
C
T
G
T
G
G
T
T
T
T
13450
A
G
A
C
T
T
C
T
C
G
G
C
T
T
G
A
T
A
A
C
A
T
C
T
G
G
C
T
T
A
T
C
T
T
G
G
G
A
A
C
A
T
C
T
G
G
T
T
T
A
13500
T
C
A
C
C
C
T
A
T
T
T
C
T
T
C
C
C
T
G
C
C
A
T
T
A
T
G
C
T
G
A
C
C
A
C
T
G
G
A
A
A
A
A
T
A
T
G
G
C
T
13550
C
A
G
G
A
G
T
T
C
T
G
A
C
C
C
A
C
A
G
G
G
C
T
C
T
G
T
C
T
C
T
T
G
G
T
A
T
C
A
A
C
C
C
C
T
G
C
T
A
A
13600
T
A
A
A
T
A
G
C
A
A
C
T
C
A
C
A
G
G
A
T
G
C
A
G
G
T
T
A
C
G
T
G
A
C
C
A
T
C
T
T
T
C
A
C
T
G
G
C
A
C
13650
T
A
A
C
T
T
T
C
C
T
G
C
T
G
G
T
G
G
C
T
T
T
T
G
T
T
A
A
T
G
G
A
A
G
G
T
G
T
G
G
C
T
A
G
G
A
G
A
G
A
13700
T
G
A
A
A
T
T
G
G
C
T
G
C
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
A
T
G
G
A
C
G
T
T
G
A
T
T
C
G
G
T
T
C
T
13750
T
A
G
C
C
A
T
T
T
G
C
A
G
T
T
T
G
C
A
A
A
G
T
G
A
G
A
A
T
G
T
G
T
A
T
G
T
T
T
C
A
T
T
A
G
G
C
A
C
A
13800
A
G
G
A
T
T
T
C
A
G
A
A
A
G
T
G
C
T
A
T
T
T
T
G
T
A
T
T
T
T
G
G
G
A
T
A
G
G
A
G
A
A
A
C
C
A
A
T
G
A
13850
T
T
T
C
A
T
G
T
C
A
G
A
T
A
C
T
C
T
A
G
G
C
A
C
T
C
C
A
G
A
A
A
G
T
A
A
A
C
T
G
G
G
A
C
A
T
T
T
T
A
13900
T
G
G
G
C
T
T
A
T
T
G
T
A
G
G
T
T
T
T
T
C
C
A
A
C
C
T
C
C
C
G
G
A
G
T
C
T
C
A
A
C
T
G
G
C
T
C
A
T
C
13950
A
A
A
G
T
T
A
C
T
C
T
G
C
C
T
G
G
A
T
A
T
C
T
T
T
G
G
G
G
C
C
A
A
A
A
T
A
G
T
G
G
A
G
A
C
C
C
A
A
A
14000
T
T
C
A
C
A
A
G
G
A
G
G
A
A
A
T
C
T
T
G
G
A
G
C
A
G
A
A
T
C
A
G
G
A
A
A
A
A
G
T
G
G
C
T
C
A
T
T
G
C
14050
T
T
C
T
T
A
G
A
T
T
T
A
C
T
T
C
A
A
A
G
A
T
A
A
T
A
G
T
G
T
A
G
G
T
G
A
A
A
G
T
A
A
T
C
A
C
A
A
G
G
14100
T
T
C
A
G
G
G
T
G
C
T
G
C
A
T
T
G
G
A
C
A
A
A
C
T
G
T
C
T
A
T
T
T
G
T
A
T
A
G
C
A
A
C
C
A
T
G
T
G
T
14150
C
T
G
T
G
T
G
G
A
G
A
C
C
T
T
A
T
A
C
A
C
T
T
G
C
T
G
T
G
T
T
T
A
T
T
T
G
T
C
C
A
T
G
C
C
C
C
A
C
T
14200
A
T
C
T
C
T
A
C
G
C
C
A
G
G
T
C
C
T
G
G
A
A
G
C
A
C
A
G
C
C
C
A
G
C
A
G
A
T
G
A
C
T
C
A
C
C
T
C
T
G
14250
G
A
T
G
G
A
A
T
C
A
A
C
A
C
A
C
A
A
A
G
C
A
G
A
T
A
A
A
A
A
G
C
T
G
A
A
C
A
T
T
A
A
A
G
A
C
C
A
C
A
14300
T
T
G
T
T
A
A
A
G
C
A
G
A
G
A
G
C
C
A
A
A
T
T
G
T
T
C
C
T
C
C
A
C
C
A
T
T
C
C
C
T
A
T
C
C
C
A
G
A
C
14350
T
T
C
A
C
A
T
C
T
A
A
C
A
A
G
G
T
T
A
A
T
T
T
G
T
C
C
C
T
A
T
A
A
T
T
A
T
G
T
G
C
C
T
A
T
T
C
T
T
T
14400
G
A
G
T
A
A
T
G
A
A
A
A
A
T
T
T
T
A
T
T
G
T
G
G
G
T
T
T
T
A
T
A
A
A
A
T
G
A
A
T
T
G
C
C
T
G
T
G
A
T
14450
G
T
A
A
A
A
C
A
A
T
T
T
C
A
G
T
A
A
G
G
G
C
C
A
T
T
T
T
T
T
T
T
T
C
T
T
C
T
T
C
T
T
A
A
C
C
T
C
T
C
14500
A
G
G
T
T
C
C
T
T
T
T
A
A
C
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
A
T
G
G
A
G
14550 |
REPEAT
T
C
T
C
G
C
T
C
T
G
T
C
G
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
A
T
G
G
C
A
A
G
A
T
C
T
C
A
G
C
T
C
A
C
T
14600
G
C
A
A
C
C
T
C
C
C
C
C
T
C
C
T
G
G
G
T
T
C
A
C
G
C
C
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
C
T
A
14650
G
T
A
G
C
T
G
G
G
A
C
T
A
C
A
G
G
C
G
A
C
T
G
C
T
A
C
A
A
C
G
C
C
C
A
A
C
T
A
A
T
T
T
T
T
T
T
T
T
T
14700
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
G
T
A
T
T
T
T
T
A
G
T
A
G
A
G
A
C
G
G
G
G
T
T
T
C
C
C
C
G
T
G
T
14750
T
A
G
C
C
A
G
G
A
T
G
G
T
C
T
C
A
A
T
C
T
C
C
T
G
A
C
C
T
C
G
T
G
A
T
T
C
G
C
C
T
G
C
C
T
C
G
G
C
C
14800
T
C
C
C
A
A
A
A
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
T
G
A
G
C
C
A
C
T
G
C
A
C
C
C
G
G
C
C
T
C
C
T
T
T
14850
T
A
A
C
T
T
T
T
A
A
G
A
C
T
G
T
G
C
G
C
T
C
A
G
A
G
G
T
A
C
G
T
T
T
G
A
A
A
G
C
A
A
G
G
C
A
G
C
A
T
14900
C
C
T
A
T
G
C
T
T
T
A
C
T
G
T
A
G
C
T
A
G
A
A
T
G
A
G
A
G
C
A
G
G
G
A
A
A
A
G
G
G
G
A
G
A
G
A
G
A
T
14950
C
C
A
C
A
A
T
G
A
A
A
T
A
C
A
C
A
C
T
C
T
T
A
T
T
C
T
T
G
G
C
A
A
T
G
G
C
A
G
A
G
T
T
G
T
T
T
G
A
A
15000
G
C
T
A
A
A
T
G
A
C
T
T
C
T
T
A
T
C
C
A
T
T
A
A
G
C
C
A
T
T
T
G
T
C
C
C
A
A
A
G
T
G
A
T
G
A
T
A
G
A
15050
A
G
A
T
A
C
T
T
T
T
G
T
G
C
C
T
T
T
T
C
T
T
T
T
C
C
A
A
A
A
T
G
A
T
G
G
A
G
T
G
A
T
T
T
G
C
A
C
A
G
15100
T
T
T
C
A
G
A
T
T
C
T
A
A
A
C
A
C
T
A
A
T
A
T
T
T
T
G
T
A
G
A
C
C
T
G
C
C
C
A
T
C
T
C
C
A
T
T
A
C
T
15150
A
C
T
G
C
A
A
G
T
T
A
T
T
C
A
T
T
C
A
A
G
G
T
T
T
G
C
A
G
C
C
A
G
A
T
G
G
A
T
T
A
A
T
G
A
A
T
T
A
C
15200
C
A
G
A
T
C
T
T
G
C
A
T
A
A
A
A
T
G
A
C
T
T
G
G
C
C
T
G
A
C
T
T
A
A
A
C
A
A
C
T
A
C
T
T
T
T
T
T
T
T
15250
T
T
C
T
T
T
C
T
C
C
T
T
T
T
C
T
T
T
T
T
T
T
G
G
G
G
G
T
T
A
G
G
G
T
G
G
G
G
A
G
C
A
G
T
C
T
T
A
C
A
15300
A
T
G
G
G
T
G
T
T
A
A
T
G
G
G
C
T
G
T
A
G
A
G
G
G
A
G
T
G
A
G
C
C
C
C
C
A
T
T
G
A
G
T
T
T
T
T
T
T
A
15350
A
A
C
T
A
G
C
T
T
T
T
T
T
A
A
A
G
C
T
T
C
A
C
T
G
C
A
C
T
T
T
T
T
C
A
T
T
C
T
T
T
T
C
T
G
A
A
C
T
T
15400
C
T
G
C
T
C
A
G
A
A
A
C
C
G
T
C
A
G
T
T
C
A
A
G
G
A
G
G
A
G
C
A
A
T
C
A
G
G
C
T
G
G
T
A
G
G
G
C
A
G
15450
A
G
A
G
G
A
G
G
A
A
G
G
A
G
A
C
T
C
A
G
T
A
G
T
C
A
A
A
T
C
C
C
T
G
G
T
G
G
C
C
G
A
T
G
C
C
C
T
T
C
15500
C
C
T
G
C
G
C
C
A
A
A
T
C
A
G
C
A
T
G
A
T
T
T
A
T
C
A
G
A
G
C
C
C
T
C
T
C
T
T
C
A
G
C
A
C
A
G
A
G
T
15550
T
G
A
G
A
G
T
G
A
G
T
T
C
C
A
G
G
G
T
C
C
T
C
C
T
C
A
C
A
C
A
A
T
A
T
G
C
A
T
A
G
C
T
G
G
A
G
C
T
C
15600
T
G
A
A
C
T
T
T
G
A
A
G
G
A
A
A
G
C
C
T
C
A
G
A
G
C
T
A
T
T
T
G
C
A
A
A
A
T
G
C
T
G
G
T
G
C
T
T
A
G
15650
T
G
A
A
T
A
C
T
A
A
A
T
T
A
C
A
TTTA GGAAATAGTC TACTGCTACC AGTTATACTT
15700
CATTTTTATT CTTGACACAG ACACCTAAAT CAGAGAACAG TAACATTTCA
15750
GAGATTATGG AAGCAGTTTG GGTATGCTCC AGCACTATAA TAGGATCAGA
15800
ATTTTAAGGC CTTTTGTATT ATTACCAATA GTCACTTAGT TTCTACTGCA
15850
GTGTACTTTG TAGGGAATTA CAGCTTTTAC TAAAAAGATT AAAATGCTAT
15900
TATGCAAATG ATTGCAGTAT GTTATTATGT TTACAAATTA ACATCCATGG
15950
CTCAACACAC AAATTAACTA ACTATGCTAT CTGTGTTATT AAGGATTTAA
16000
TAAAGTAACT GTTAATAAAA ATGGGTAGCT TGGAACTTTA GTAGAAAGCA
16050
ATTGTGATTT AACACGTGGA ACTTGAGCAT TGTGTTTAAT GTTCTAGGTG
16100
ATATAATGGT AAAATAAAGT TGAAAAAAGC ACATAGAAAA ACCAAAACTG
16150
TGTGAACAGC AGAGCTGCTT GCCTGAGAGG CTGATGAACG TGAACTAAAT
16200
AGCTTCAAGC TACAATGTAC AGTGGGCAGC ATAGCAATAA ATCTAAGCAA
16250
AGCACACAAA ACATCTTCTA TTAATAAATA GTTCATTGAA ATGATAATTA
16300
CCCTCCATTA CGTGTTTGAT ATGTTCCATA CACACAGAGA ATACTTATAT
16350
TATTCTAAAA TGGATCTCAG AGCAAATTTT GCTGTGGCGA ATGGGATTTA
16400
GCTGAAGAAT ATC
G
CTGGGT GATAAAAGAG AAGAAGGCTG GGTTCAGACT
16450 |
var(16414):[A:0.12]
AAGATGGCTT TACAAACAGG CTGCAAATTG CTATTCCGGG CTGTTCATAA
16500
GAGATCATAA AAGCAAGGAG ATAAGAGCCG CCAAGGTCCC TGAGAAATGA
16550
ATGTATGTGA TTATGTTATC TCGTAGGTTG GATTTACTAG ACAGACCGAC
16600
AACACCTTCA CTTTA
G
CCCA ACAGGAAAAG TAGAAAGAGA TACAGGTTTG
16650 |
var(16616):[A:0.03]
GATAACAAAC TTTGTTAGAA TAGGAAATTC CAAAACACTG TAATTCAAAT
16700
GTTTCAGAAG AGAGCCAGGA TTCCAGTCAC TGACTTCTGT GCTGGATCTC
16750
AAAAAAAGAG CTAGGGATAT GACCTAATAT TAAGCAAATA AACAAAAAAG
16800
AAACAAAAGA ATTACAAGAA CATCCTGGAG AACTAATTCT ATATTTCAAA
16850
TATTTTGGAC T
G
ATGTTTCT T
A
ATTCTCAA ATAAAGATGT TGAGGA
C
TTC
16900 |
var(16862):[C:0.16]
|
var(16872):[G:0.06]
|
var(16897):[:0.01]
TAAGTCCACA AACA
A
TTATC TTTTTAG
G
TC TCCCTATTGA GGGATACTAA
16950 |
var(16915):[T:0.05]
|
var(16928):[A:0.01]
CTTGAACTTC TTAGTAGGAA TATCTGGATG TGCTTAAGAA ATGTACAAGC
17000
AGGGAAGACA CCGCAAAGTT GGTCAAGGTT TGT
A
CCCTTG CATACAATAC
17050 |
var(17034):[G:0.01]
AAGCAATTTA TTTTGTTCCA AATAGCACCT CTGTGGTTGC AAAACTACTT
17100
ATGCAAATTT TTGATATCTA GCTTTAGCAA GGTGCCTGGT TCCTTCATTT
17150
CATCCC
A
CAT TTGGATAAAT TGTGTTGTTC TTCACTCTTC CAAATTTGTC
17200 |
var(17157):[G:0.03]
CTTGTGGAAG CGAACACTTG TAAATTGGTT GAAGCTTGCT AAGAGAAAGA
17250
AAGGGA
G
GAG GTAGGGAAGA GGAGGAAAAA ACTTGACCAA AAGCAGTTGC
17300 |
var(17257):[A:0.03]
TGTGACAGCT TATGATTTGA TGGTTTGTGG TCTTGTCCTG TTCTCAAGCA
17350
CCTGATCAAG AAAGTGGTAC AATCCTGCTA TGCAGACATT CTGGAAATCT
17400
TGCCAACATT CACCTGACAT GACCAAGGTT TAAAGTCCTT GCTGTAATTT
17450
TACAAAGCGT AGTGAGAGTG TGTGCCTGTG TATGTGCATA TACACTCTCT
17500
CATATCCTTT TTTTT
T
TTTT AGGGGGAAAA AAGTGATCTT TGCCATAGAA
17550 |
var(17516):[C:0.15]
GGGTGGTAAA ATAATTAGTC CAATAGACAA ATGTCTTGGC CCATGTTTAA
17600
ACAGAGCTTT AAGGACACAG TGTTCCCAAG AGTCACATAT CTAAATACAA
17650
ACCAGTGTCA GCTGCCATGC AGACCAAAAT GTAATAGCCT GCTTTCACAT
17700
AGGTCATCGT CAATCCATTT TGGTCGCAGT CACACTGCAC ATCTGTTTCT
17750
G
C
GAGCTGCA GCTTCTTAAG GTGGCATTTG GACTTCATCA GAACACAAAC
17800 |
var(17752):[T:0.07]
AACCAAGCTA TAAATTGCCA CTTCTGGAGT TACTTTGAAT AAGTGTATAC
17850
TGTTTCATAT TTATAAT
G
GT GAAGCTTCAT AATATTCACA GTGAATATGT
17900 |
var(17868):[A:0.15]
AACACCGATC AGTTCAACAA GCATGAAATT GTATGTTGTC AACCTGTCAC
17950
ATAAATAGAG TCATATTCTG GCTTGCGATA ATGTTGAACT AACA
T
TTTTT
18000 |
var(17995):[:0.12]
CCCCCAGAAT TGTTGAGAGG TTCACA
A
AAA AGTGAGGAGG TAGCATTTCC
18050 |
var(18027):[G:0.16]
TTTGGGTAGA TAACCAGTCA AGGCTATTGT AAAGTTGATA TTACTGTTGA
18100
TGGGTTCCTT TT
C
TCC
C
CTC CCTCCAAAGC ACTAGCTTTT CT
T
GGGTGAA
18150 |
var(18113):[T:0.01]
|
var(18117):[G:0.06]
|
var(18143):[C:0.34]
TGCTAATTGG CTAATCTGGT GTGTTTCTGC TGTCATCTAA CGG
T
A
T
C
A
T
T
18200 |
NOT SCANNED
T
T
C
A
G
C
T
A
G
T
A
C
T
T
G
G
A
G
G
C
T
C
T
T
T
T
T
G
G
G
T
T
G
T
G
T
A
T
G
T
G
T
G
A
G
T
A
G
C
T
18250
T
T
T
T
T
T
C
C
C
C
T
T
T
A
A
A
A
C
T
T
C
T
T
T
T
T
T
T
T
T
C
T
T
T
C
T
A
T
T
C
T
T
G
T
A
G
T
G
C
A
18300
A
A
T
C
A
G
T
G
C
T
A
A
T
T
G
T
C
A
T
G
A
A
A
T
T
C
T
C
T
A
A
C
T
A
T
A
C
T
C
T
G
G
C
A
A
G
C
T
T
T
18350
C
T
T
G
T
T
G
C
C
T
T
T
T
C
A
C
C
C
C
A
G
T
T
A
A
C
T
C
T
T
A
A
T
G
T
A
T
T
A
C
T
A
G
A
G
C
A
T
T
A
18400
G
G
A
A
A
T
A
A
T
G
A
A
A
G
C
T
G
G
A
C
A
T
T
T
T
A
T
T
C
A
A
A
C
T
T
A
G
T
T
G
A
G
A
T
A
G
A
G
A
A
18450
T
C
A
T
C
T
A
A
A
G
A
G
A
T
G
C
A
G
A
A
A
A
A
A
A
T
T
A
T
T
G
A
A
C
C
A
A
A
T
T
T
G
C
A
C
C
T
T
A
C
18500
T
A
A
A
A
A
G
A
T
A
A
A
G
G
A
T
G
A
A
T
G
A
A
A
T
G
T
G
C
T
T
G
C
C
G
G
T
A
G
C
T
A
C
G
G
A
G
A
A
A
18550
C
T
C
A
G
A
G
A
C
C
A
G
T
T
T
C
C
A
C
A
G
T
G
G
C
T
G
A
T
A
T
T
T
C
T
G
C
A
C
C
A
G
A
G
G
C
A
T
G
G
18600
T
A
G
A
A
A
C
T
G
A
T
G
C
A
A
G
T
C
T
G
T
T
T
T
C
A
C
T
T
T
T
G
A
G
A
A
A
T
T
C
T
T
A
G
A
T
G
T
G
T
18650
T
C
A
A
C
C
T
T
C
C
T
C
A
T
C
T
T
T
C
T
T
C
C
A
A
T
G
G
C
C
T
G
A
A
G
A
C
A
A
A
A
A
G
G
C
A
T
T
G
C
18700
A
A
T
C
T
G
T
A
T
T
A
C
C
C
G
C
T
T
A
A
G
C
T
G
C
T
A
A
C
T
T
C
A
A
C
A
C
C
T
T
G
A
G
A
T
A
G
T
A
C
18750
T
T
C
A
G
T
T
T
C
T
C
T
A
A
A
G
C
A
C
T
A
T
G
C
A
A
T
A
T
T
A
C
A
G
G
G
G
A
T
T
A
T
T
A
C
C
A
A
C
A
18800
C
T
T
T
T
C
T
T
T
T
C
A
T
C
C
C
A
T
A
T
C
A
C
T
T
G
G
G
A
T
A
T
G
G
C
T
G
G
T
C
A
C
A
T
T
T
T
T
T
T
18850
C
T
T
T
A
T
T
T
T
T
T
A
T
T
T
T
T
T
A
T
T
T
T
T
T
A
T
T
T
T
T
G
A
G
A
C
G
G
A
G
T
C
T
C
G
C
T
C
T
G
18900 |
REPEAT
T
C
G
C
C
C
C
G
G
C
T
G
G
A
G
T
G
C
A
G
A
G
G
C
A
C
A
A
T
C
T
T
G
G
C
T
C
A
C
T
G
C
A
A
G
C
T
C
T
G
18950
C
C
T
C
C
T
G
G
G
T
T
C
A
T
G
C
C
A
T
T
C
T
T
C
T
G
C
C
T
C
A
G
C
C
T
C
C
T
G
A
G
T
G
A
G
T
A
G
C
T
19000
G
G
G
A
C
T
A
C
A
G
G
T
G
C
C
T
G
C
C
A
C
C
A
T
G
A
C
T
G
G
C
T
A
A
T
T
T
T
T
T
T
T
T
T
G
T
A
T
T
T
19050
T
T
A
G
T
A
G
A
G
A
C
G
G
G
G
T
T
T
C
A
C
C
G
T
G
T
T
A
G
C
C
A
G
G
A
T
G
G
T
C
T
C
T
A
T
C
T
C
C
T
19100
G
A
C
C
T
C
G
T
G
A
T
C
C
G
C
C
C
A
C
C
T
C
G
G
C
C
T
C
C
C
G
A
A
G
T
G
C
G
G
G
A
T
T
A
C
A
G
G
T
G
19150
T
G
A
G
C
C
A
C
T
G
C
A
C
C
C
G
G
C
C
C
A
C
A
T
T
T
T
C
T
T
A
G
ACAAGAAC CAATTCACTG
19200
GCTAAAGCTC TCAGTTTCCA ACTTTTGCAA CATCGTCACA TTTCTTCTTG
19250
CCTGTGGATT TTAAAAGTTC ATCTCTCACT TATT
T
ACTTA CCCATTCATC
19300 |
var(19285):[A:0.01]
AAAATATAAT TGTCATCCAT TAGCATGCTT AGTGTCTGGC CATTTTAG
G
G
19350 |
REPEAT
G
G
A
T
A
C
A
G
T
G
G
T
T
A
A
A
A
G
T
A
A
A
C
C
T
A
G
T
C
T
C
T
G
G
C
T
C
C
A
T
G
A
A
A
A
T
T
T
T
G
19400
G
T
T
A
G
T
G
A
T
G
A
A
G
A
C
A
G
G
C
C
T
T
T
T
A
C
A
A
A
T
A
A
G
A
T
A
A
GCT GTCTGTTTGA
19450
GGAAGTAGAG CAGGGAATTT CTCCATCTGT CTGTTACCCA GTTATCACTA
19500
GCAGATAAAT TCTGCCCTTC TCCTACTTAT TGTCTTTAGA AATGCCTTCA
19550
CCTTGAAATG GAATTCTGCT GGAGAGCATT TCTCCTAGC
T
AGAGGAATAT
19600 |
var(19590):[C:0.02]
TCTATTCCAA ACCAAGATCT GTCCCACTGC CCCAACAAAT GCAGGGCAGT
19650
G
G
GACAGAAT ATTTGAGGTT GGAAGACCTG AAATTTATGA TGTCCTACAC
19700 |
var(19652):[A:0.01]
ACAGTATATT AAAATAACAG TTTGCTCATT GGAAGTGCTG GGTGGCCAGG
19750
GAGTGTGGAG GGAAAACAAG AGGAAGCCAA CCAAGGGAAG AGAGCAA
G
AC
19800 |
var(19798):[A:0.01]
CGTCAGTGGA GAGTTCTTTA ACCAG
T
GTGC AAGTCTGACC TGACCAGAGT
19850 |
var(19826):[A:0.01]
GCTGTGCCCT TGGTGGGGCT TCT
A
TGGATG AGAACTGTTT GGTACCATTT
19900 |
var(19874):[G:0.09]
TAGGTCTGTT GACCTTTCTA TTTGAGAATG GTATTTCAGT CCAGCTGGAA
19950
GGACTGACAC G
C
TTTTTGCC TGTTTGAGAC ACTTGGTGTA TGTGGCTTTT
20000 |
var(19962):[T:0.01]
CTCTCTCTCT CTTGGATCCA TCATCTCTAA GTGATAGCTC CTTGCTT
C
AT
20050 |
var(20048):[A:0.04]
GGGGTAATGC TATTCAGGGG CTATCCTGCA
C
CCTTGGGAG AGGCATGTGC
20100 |
var(20081):[T:0.01]
AGGAAGAATG CTACCGATCC CTTTCCTCTT CCCTCT
G
GAG GTACCAGGCA
20150 |
var(20137):[A:0.03]
TTACATCCCT ACCAAGCCTT ACTCAATTAG GTCTCTTTCA GATTCCTATA
20200
ATACTC
G
AGC TTAAATCCTC TTCTCCACAG TTCTTTCTGA GAAATTTATT
20250 |
var(20207):[A:0.03]
TCTGCTTTGA AACGGCTCTT GTATAGGGGA AAAGTGCCTC TATTATAGCA
20300
CTGCCCTTGG TTTTTCCA
T
G GGCTCTTGGC TTAAGGACAT TAGCTTCCCT
20350 |
var(20319):[C:0.07]
GGGTGCCATC TCATTTGCTC AGATGTGAAG TTAGAGCTTC TGTATTCCAG
20400
ACATAGTTCT CCTGGGTGTC CAGGGATCCT TGCCAACCCA GATTCTCTCC
20450
AGATATGTTC CCATGTCAGA ATCCTCTTGT GTCTTGCCAG CCCATACTTA
20500
GCGGGGACAC CCTGCTCTCT CCTCTGAGCT GCATATCTCA GCATGCATTT
20550
TTCATTTAGG CAATGCTGTC TGATAGGCAG GTTCACCTCC TATTCCCACT
20600
GGAGAAGAGT CTGGGCAAAT GCCTGAAAGT TTGAACACAG CAATGCCATA
20650
TAGGATAAGT GACTTCTTTT CCTTGCTGGT CCCCAATTCC AGGGCTCTGC
20700
G
TGCAACAGA TTTGAGAGTT ACATTAGGTC ACAATGCCAC TGTCTAGCTC
20750 |
var(20701):[A:0.04]
CTTTAATCCT ATCACCGGCA ATCCCAGCAA TGTAGCTGAG GTGGCTGCCC
20800
CTGTCCTGAA GGACTTTGTG TCAGTTTCTC CTGG
G
ACAAA TCTAGTCTGG
20850 |
var(20835):[A:0.03]
ACCACTTTGC AACATTTGTT CAAACTGAAA ATTTTGACAA AGACATTCTG
20900
TTCACAAAGA GCCAACAAAT GTTCTGTGTT TCGATACATT TGGAGGTTAC
20950
AAAATGTTGC CTGGTCTTGG CAGATAACTA AGTCTGGGGA CCCACATAGT
21000
GCAAGCCATG CCCTGTTTAA TTTGTCTTTC AATGGCAAAT GTGTTTCTTC
21050
TGTGATTCAG CATAAGGGAT GATACCCTCC AATAGGACTG TGTGACCTCC
21100
CTGCTGCTTT TGTGGTATAG AAAAGAAAAA AAAAAAAAAA CAC
G
GATACC
21150 |
var(21144):[A:0.11]
ACTTTTTTCC TTTAGTTGCT GGTTTATTTT TATTTCCA
G
C TACATCTTTT
21200 |
var(21189):[C:0.01]
ATAGTTGAAA GAGAAGATGT ATGTTCCATA GATAGTAC
G
C ATTTTTATGG
21250 |
var(21239):[T:0.04]
TTATTTTTAT AATTCATACT GGAAAACCTA ATTTCTGTAG CCATTAAAAA
21300
TTTAGGATTA TTAATTGTCT GAAACATAGG TGAGAAGTAC ACTGTTTTTA
21350
AAATGTCTCT GAGAAGCCAA ACTAGATTCA GAAAAATTCC CTCAGATGGA
21400
GCACATTTTA TTCCCAGATA CACTTCTTCA CCCCTCACTT AACGCTTGCT
21450
TCCTTTTGCT TTACTTATGA TTTAAATGAA TCCGGTTGTC TAATGTTCTA
21500
TTCAATATGT GATGTTCTAT GAGCACATAT GACATTTGAA GAAATGGTTT
21550
AGAAAATTCA TGAAATGGTG ACAGTAAAAA GATAATGGTG AGCAGTGACA
21600
ACTGACCAAA AGAGACAAGA CTACAAACTA CAGAAAGTTG ACAAACCCTG
21650
AAAATATGAC AGTCTGGGGC CTTTTAGTTT GAGGGAAAAT AATCCTATAT
21700
TTCTCAATAG GTCCATACAG TCATTTTGCA ATACCAGACA GTGCTACCAA
21750
AATCAATCCT CATAATTTTT AAAGTGGGGA
A
A
A
T
A
T
G
T
A
A
A
T
A
C
G
T
G
A
T
T
21800 |
NOT SCANNED
C
G
G
A
A
A
T
C
T
T
T
C
C
A
T
A
A
A
A
A
A
G
T
T
T
T
A
A
T
A
A
A
A
A
G
T
T
T
G
G
T
G
C
T
T
A
A
G
C
A
21850
A
G
T
T
A
A
G
T
T
C
T
T
T
G
A
T
T
T
A
T
C
T
G
C
A
C
C
A
G
T
G
C
C
T
A
T
G
T
G
G
A
T
T
A
A
A
G
C
C
T
21900
G
A
T
C
A
T
G
T
G
A
G
G
A
A
A
T
A
G
G
T
G
A
G
G
C
A
T
A
T
A
T
A
C
A
A
A
C
A
C
A
A
A
C
A
C
G
T
A
G
T
21950
T
T
T
A
G
A
T
C
T
A
A
C
A
G
A
T
T
T
T
A
A
T
G
G
A
G
T
T
T
A
T
A
T
A
T
T
A
T
C
C
T
G
T
A
A
G
T
G
T
T
22000
T
C
C
T
G
T
G
T
A
G
A
C
T
T
T
G
A
T
A
A
T
A
A
A
G
A
A
G
A
A
A
A
T
G
C
T
C
C
A
T
G
A
A
A
T
A
C
C
G
A
22050
A
C
T
T
C
A
T
T
T
T
A
T
A
A
T
C
T
G
T
T
A
G
A
T
T
A
C
A
T
C
T
T
C
C
C
T
T
A
A
A
A
A
T
A
C
A
G
C
T
A
22100
T
T
G
A
A
A
T
T
T
T
C
T
T
G
A
A
T
A
A
A
G
A
G
A
C
C
A
C
T
G
G
A
T
T
C
T
T
T
T
T
C
C
T
T
A
T
C
A
A
T
22150
A
G
T
A
A
A
G
C
T
T
T
T
T
G
G
C
T
A
C
A
G
G
G
A
C
G
T
T
G
G
T
C
A
A
G
A
C
A
A
A
T
A
T
A
G
C
T
C
A
G
22200
T
A
G
A
G
T
T
A
T
C
G
T
T
A
A
G
T
A
A
G
C
A
A
T
T
T
C
C
C
A
C
A
T
T
A
C
T
T
T
A
G
A
A
T
G
A
A
A
T
C
22250
G
C
C
T
A
T
A
C
T
T
T
T
C
T
C
C
T
T
C
A
T
G
G
C
T
T
T
C
C
G
T
A
T
T
T
A
T
C
C
T
A
C
C
C
A
G
T
C
C
T
22300
C
A
A
A
T
A
A
G
C
C
A
C
C
A
C
C
C
C
A
G
C
A
A
T
G
C
A
C
A
A
C
T
C
A
C
T
T
G
T
A
A
A
T
A
T
T
C
A
T
C
22350
T
G
G
A
G
C
A
T
A
C
G
A
A
A
T
C
G
T
A
A
T
A
T
C
A
C
T
A
C
A
G
A
G
A
C
T
A
A
C
T
G
C
C
C
C
C
C
C
G
C
22400
C
C
A
C
C
C
C
G
C
C
G
T
G
C
C
A
T
T
T
T
C
C
T
T
T
G
G
A
G
A
C
T
C
T
T
A
T
A
A
A
T
A
A
A
T
G
A
A
C
A
22450
A
C
C
T
T
A
G
A
G
C
T
T
T
C
A
A
A
A
C
A
G
T
C
A
T
T
A
A
G
A
T
C
T
G
C
T
A
C
T
T
G
C
C
T
T
T
G
G
A
T
22500
A
A
A
G
A
A
T
T
T
C AGATAATGTA CAGGACTGGG CTTCCTAAAT CTAATTTCTG
22550
TCTAAAAACC TAGGGAATGC TGTAGCTGTA TCTTCTCTAT CCAAACTCTC
22600
TTGACTGATT CTGGCACCTT TCACCTGAGA ATGCACAGCT CAAGATTCTC
22650
TATACGGACC CAGAGCCTTG GTCGGGCCA
C
G
ACCCTTCAT TAATATTCAA
22700 |
var(22680):[T:0.05]
|
var(22681):[A:0.39]
ACTTTGGCAG TTTCAAAGAA TGCTGCCCTC CTCGACCACT GTGAGCAGTC
22750
CAGCTCCCCT GCTACTTTCT CTCATGCTTA TCCTTTGTAC GAAGACATCT
22800
GTGTCTTTCC TCATGTCTCT TTCAGGAGTA ATTCTTCCCC TTGTTCAATT
22850
TTTTCCTTTC TCTTTATGGC TGT
C
GTAATA GCCCCTGATA CAGCCAGGCA
22900 |
var(22874):[T:0.01]
G
C
CATGACCC TGTCCATCAC TCACCTGCAA GCTATTCTTG AACCACTGGA
22950 |
var(22902):[G:0.07]
TGGTCCCTGA GTGACTAGAT TAATGGTGCC AGTGGTGAGC CTTTTCACCT
23000
GACCTTTCAT CCAGTGACAT ACAAGCTGAT TCCAGGCTGT GTGCAAGGCT
23050
GGCTGCCCTG CCATCTCTGC ACCCTCCATG AAACCAAGCA GTGGAAAGGA
23100
GAGTATCCAT GCAAATT
A
AG TGCAGAAGCA GGGATAA
A
AT AAGGTGTGCA
23150 |
var(23118):[C:0.05]
|
var(23138):[C:0.21]
G
T
TGGGAGTT ATCAGAAATT AAATCTGTCT TCCTTTGAGT GCCATTGGAA
23200 |
var(23152):[C:0.16]
ATGAGTCTTA AGGAATGAGA AC
C
GAAAGGA AACTTTCCAT AGACACCATT
23250 |
var(23223):[T:0.50]
TCCATAAACG GTATTGTCAC AATATGCTAT TTTAAAGACT GGTTGTTTTG
23300
GTCTGTGTTT ACATTAAGCC TTTACCAGGC ATGGGATAAA CTATTAAGTC
23350
CCGAAATTTA GGAAAGTATT TGTGGC
C
GTC TTTGGCACAA AGTGAATTTT
23400 |
var(23377):[T:0.02]
TGTTGTCACA TGTGCAAAAG AGCATCTTTT TCTTTCGTTA AGGCCTTCGA
23450
ATT
G
TGGTTC AGCTTTCTAA GTAATAGCTT TTTGGCTAAA TCTCTCAAGG
23500 |
var(23454):[C:0.02]
TGCATTATAA ACTGCATGAG GGAAAGAGGG ACCTCATCAC CTCCTCAGTC
23550
CCTAGCACAA AGCTGTGCAC ATTAAAACTC TCTCTAGTTT TTGTTAATGG
23600
ACAGATTTAC AGGGGCTCTA CCAAATTCAG AAAGAGAGAG AGAATATAAC
23650
ATGACCTTCC CAGCCATTCA GACCAATCAT GCTAAAAATA AGACATATCC
23700
AAGATCTGAG AACATGTTCT CCAAGAGATG GTTTATAAAC AGAGCCAATA
23750
GTGACAGCAG TATGCTGTGT GTCTGCCAGA GTGTCTGTGA ACTTACCCCC
23800
TAACTCAGCT ACAAGACTTG CTGTTCAGAT GAAGATATAT GGAGTTGGGA
23850
GACATGTGGT TGTGTTAAGC GAATGTGCAT TGGCGGGTAA AGGCGCTGCT
23900
ATATGTCTAC TGAAGACATA GAGCATTTAC TCTTCTCTCC CCGAGAAGAG
23950
GAAAGGGCTC TGCCACTCAA TGAAGAGCTC AGGAACAGGT ACCTTACCGG
24000
GGTTCCAGAG CATGAAAGTA AGTGTGTCTC TGTTCAAGGA ACCCGCTGTT
24050
CCCAGGAAGC TCATGCAAAT GCATGGCCAC AGCTTCCCAA CACGCTGTTC
24100
CCAGCACTGT GCCCGTATTT CCTGGCTGGT TTTGACCCTC TCAATGGATT
24150
CAGACTTAAA ATTTTTGCAA CTGTTTTTGT CGTTGTTGTT GTTGTAGTTT
24200
CCTCGTTTAC GATTGTAATG AAAACAGTTT ACCTCTTGTG GAAAAGT
G
TG
24250 |
var(24248):[A:0.21]
CATGATTGTA CAAGTTTACT GTGCCATACT TGTATC
G
CAG TTGCCTTATT
24300 |
var(24287):[A:0.03]
TTTGGAAGAA TCAAGCTTAG GGGCTAGAAA GAAATCCTGG GCTGGGGAAT
24350
GATGGGTAAT TTCTCAAGGC ATTCAGATCT TTCAGAAGTT GTGAATGATT
24400
CTGACCTTAC TTTCATTTAT AGTCTGTGAT CATTGGAACC AGGATGCAAA
24450
AATAGCAGAG AGAGGATCTC CTTCACCTTA ATTCCCTGCC CTTTTCTGGT
24500
ATCTGTAGTA CAATTGACTA TATGGACATC ACTGCTATTT TAGCAAAAGC
24550
TGGTGAGTTA TCTTTTTTAG ACGGGACAGT CTACCCAGTC CAGGATTTTA
24600
GTCTGACTGT CATGTTATAA TTCAGTATGT TCCTATGCAG GATGCTCTAA
24650
TGCAGAGACT GATTTCATTC ATTCTTAAAC TGACC
C
A
T
T
T
A
T
C
A
A
C
T
A
T
T
24700 |
REPEAT
T
T
A
A
A
A
A
G
C
A
A
C
A
A
C
T
A
C
A
T
G
C
T
A
G
G
C
A
C
T
A
A
T
T
T
A
A
G
T
G
C
G
C
A
T
A
A
T
A
C
24750 |
var(24723):[C:0.24]
A
A
A
G
A
T
G
T
A
T
T
A
A
G
T
A
C
A
T
A
A
T
G
C
C
T
A
C
G
A
C
A
C
A
G
A
A
T
T
T
T
C
C
C
T
T
C
A
G
G
24800
A
G
T
T
G
G
T
T
G
G
C
T
A
G
T
G
A
G
A
A
A
G
A
C
A
G
A
C
T
T
C
G
G
C
A
A
C
T
A
A
T
T
A
T
A
A
AATA
24850 |
var(24814):[T:0.03]
AGGGGATGCA TTCTGTATTA AAGTCAGAAA TGAAGTACCA TGAAGACACA
24900
CATAGAGGAG TAAAAATGTC CGTGAAAAGG GTGAGAAGAG AGGAAATTTG
24950
ATAATTGTTG CTAGAT
T
T
TT TTACTCGTGA GTCTTCAATA AGTCAGAAGT
25000 |
var(24967):[A:0.08]
|
var(24968):[A:0.10]
TAAATACCCT CTTATTTATT TATAAAATTT AGCAAACTGC ACTTCCCACC
25050
TC
T
T
AGGAGG AAGACAAGAA AAAGGATACA CATAGTAGGT TCTTAATAAC
25100 |
var(25053):[:0.07]
ATTTGAAAAT AAATTTGCCT TCTAACAAGT CCCGTCTACA TTGCACTCCG
25150
CAGTTCAATG GCTCATTAGG TTTTAACAAA AGCAGCGCAG CAAAATAAGA
25200
AGGATTCTTG AGTCAAGCAC CCCCGGGCGG TATCTCTGAG AGCAAATGTG
25250
ACAAATAGAA TCAGAAATGA ATTAAATAGT CAGCTACAGC AAGCCAAGCT
25300
AAAAAAAAAA GCTCTGAAAT GACCCAAAAT GGAAACGTAT TACAGTTATC
25350
TGCATTCACA GTAC
C
GAACA AGTTTGGTCG TATTTAAGAT AATTCTCTAG
25400 |
var(25365):[A:0.16]
TGCCTGCTAT TTTTAGCTCA AGGGTAAGCT CCTGTAAGAG TCTTTCGGCA
25450
TTGCATCCCT TTAACCTGGC CTAACAAACT AAGCCAATAA GCTGTCTGAT
25500
TTTCCTGGTC CATCAGGGAG GAAGAGAGAT AGCTAAAACA AACCATTTGC
25550
GGGGAAAATG TTCGGCCTAT CTTGTGTTAA GAGCTTTTTT CATATAGATT
25600
TTTAA
A
ACAT CC
C
A
A
T
A
T
T
A
A
G
T
G
T
T
G
C
C
T
G
T
C
A
G
A
G
A
C
C
A
A
A
A
T
G
T
C
A
A
25650 |
var(25606):[C:0.17]
|
NOT SCANNED
G
C
T
T
T
G
C
T
G
T
T
T
T
G
A
A
A
T
T
G
G
A
G
G
C
T
C
A
T
G
G
T
T
A
T
A
A
A
A
A
G
A
G
G
A
T
T
T
T
A
25700
T
A
G
G
C
C
T
A
G
T
C
T
A
A
T
G
G
A
A
A
T
A
A
A
C
A
T
T
A
C
T
C
C
A
T
T
A
C
C
T
T
C
A
G
T
A
A
A
A
C
25750
C
A
A
A
T
C
T
T
T
A
C
A
G
T
T
C
A
A
G
C
T
A
T
C
A
T
T
A
T
T
A
A
T
G
T
C
T
A
T
G
A
G
A
A
G
A
A
A
G
A
25800
A
A
T
G
T
T
T
C
T
A
G
G
G
C
T
T
T
A
T
T
T
A
T
T
T
T
T
T
T
T
A
G
G
T
A
A
A
G
A
A
A
G
G
C
G
A
G
C
T
G
25850
T
A
C
C
A
T
A
G
C
A
A
A
T
G
A
A
A
G
T
T
T
T
C
T
T
A
A
A
G
C
T
T
T
C
T
C
C
T
C
A
G
T
G
A
C
T
T
T
G
C
25900
A
G
T
G
T
G
T
A
A
T
T
T
A
A
A
A
G
C
A
G
A
A
A
G
C
A
A
A
G
A
A
A
A
T
G
C
A
G
T
T
T
T
A
A
A
A
C
A
C
T
25950
A
G
G
C
T
G
G
C
T
A
T
T
C
C
T
G
G
T
A
T
C
T
T
T
C
T
T
T
C
T
T
A
C
A
T
A
T
T
C
A
C
A
A
C
T
C
T
T
T
G
26000
T
G
A
G
C
C
T
A
T
T
G
C
T
C
T
G
T
C
A
A
T
T
C
T
T
G
T
C
T
G
T
C
T
G
T
C
T
C
T
A
T
A
T
A
G
T
G
T
A
T
26050
A
C
A
A
A
C
A
A
C
T
T
C
A
T
C
A
A
C
T
A
T
T
A
T
T
C
A
C
C
A
C
C
T
T
C
T
A
A
G
T
G
C
A
C
A
T
G
T
A
C
26100
A
T
G
T
G
T
G
C
G
T
G
T
G
T
G
T
G
T
G
T
G
T
G
T
G
T
A
G
G
A
A
T
A
A
A
T
G
T
G
G
G
C
T
G
T
C
T
C
A
G
26150
T
T
T
A
A
G
C
C
A
T
A
T
A
A
C
T
G
C
A
T
G
T
G
T
A
G
A
T
T
A
C
A
A
C
A
C
T
T
A
A
C
A
A
T
A
T
A
C
T
A
26200
G
T
T
T
C
C
A
C
T
C
A
T
T
T
C
A
T
C
A
G
A
A
A
C
C
A
T
G
C
T
G
C
T
G
A
T
C
A
T
C
A
A
A
G
T
T
T
A
A
G
26250
A
C
T
G
T
T
C
T
C
A
G
G
T
T
G
A
C
C
A
G
T
T
T
A
C
C
T
A
C
A
T
T
C
T
G
A
A
G
C
C
T
G
C
A
T
T
T
G
C
C
26300
A
A
T
T
T
A
G
T
G
T
G
A
A
A
T
A
G
A
T
T
T
C
A
G
C
C
G
C
A
G
A
T
G
C
T
A
C
C
T
G
T
G
A
G
G
C
A
A
T
T
26350 |
REPEAT
A
A
T
C
G
C
C
A
G
A
T
A
T
T
T
C
T
T
G
A
G
T
T
C
A
T
A
T
T
A
T
T
A
T
G
T
G
C
A
A
G
G
T
G
T
T
A
T
G
C
26400
C
A
G
G
T
G
C
G
G
T
A
A
G
A
G
G
T
G
G
A
A
A
G
G
T
G
T
C
T
A
A
C
A
C
A
A
G
G
C
C
T
C
A
G
T
C
C
T
C
A
26450
A
G
G
A
G
A
C
T
T
G
T
C
A
C
T
G
A
A
C
T
G
C
A
G
A
A
A
T
G
A
G
A
T
A
C
C
C
A
T
G
T
T
G
A
T
A
G
A
A
T
26500
G
C
C
A
C
C
C
A
A
G
G
A
A
A
T
T
T
T
A
A
G
A
C
A
T
T
T
A
T
A
G
A
G
T
C
C
C
T
A
C
T
G
T
G
T
C
C
C
A
G
26550 |
REPEAT
A
C
A
C
C
A
T
G
C
A
T
G
G
G
T
C
T
T
C
T
C
T
C
T
T
A
A
T
A
G
A
T
C
T
G
A
T
T
C
T
A
C
C
T
G
A
A
T
T
A
26600
C
C
A
G
C
C
T
T
C
T
C
A
T
A
A
A
C
A
T
T
T
T
A
T
T
G
G
G
G
C
C
G
T
G
C
T
A
A
G
T
G
T
C
A
A
T
C
A
C
T
26650
A
C
C
C
T
T
G
G
T
T
A
T
G
T
G
T
G
A
T
T
T
C
T
G
T
C
T
T
C
C
C
A
C
A
G
A
T
G
A
G
G
A
A
C
T
T
A
G
G
A
26700
C
T
T
A
G
T
A
T
T
T
A
A
C
C
A
G
A
A
C
T
C
A
G
A
T
T
T
C
C
T
G
G
T
T
C
T
T
A
C
T
G
C
T
T
C
T
C
C
T
C
26750
A
G
T
G
T
C
A
G
A
G
A
A
G
A
A
A
T
G
G
G
T
A
T
T
T
T
C
T
A
T
C
A
G
G
A
A
T
C
C
T
C
A
G
A
A
A
C
G
C
T
26800
G
G
C
C
A
G
T
C
A
C
A
T
T
G
C
C
A
T
G
T
T
C
A
A
G
G
A
T
A
T
A
T
T
T
G
C
T
T
G
A
C
T
G
A
G
G
T
G
G
T
26850
C
C
A
T
T
G
A
T
G
G
T
T
G
A
A
G
G
A
T
C
A
A
G
C
T
G
T
G
A
C
T
C
T
T
T
C
T
T
T
T
C
T
T
T
T
G
G
A
G
G
26900 |
REPEAT
C
A
G
T
C
T
C
A
C
T
C
T
G
T
T
G
C
C
C
A
C
A
C
T
G
G
A
G
T
G
C
A
G
T
G
G
T
A
T
G
A
T
C
T
T
G
G
T
T
C
26950
A
C
T
A
C
A
A
C
C
T
C
C
A
C
C
T
C
C
C
A
G
G
T
T
C
A
A
G
T
G
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
27000
C
G
A
G
T
A
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
A
G
C
A
C
T
A
C
C
A
T
G
C
C
C
A
G
C
A
A
A
T
T
T
T
T
T
G
27050
T
G
T
T
T
T
T
A
G
T
G
G
A
G
A
T
G
G
G
G
T
C
T
C
A
C
C
A
T
G
T
T
G
C
C
C
A
G
G
C
T
G
G
T
C
T
C
A
A
A
27100
C
T
C
C
T
G
A
G
C
T
C
A
G
G
C
A
A
T
T
C
A
C
C
C
A
C
C
T
T
G
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
A
G
G
G
T
27150
T
A
C
A
G
G
C
G
T
G
A
G
C
A
A
C
C
G
T
G
C
C
T
G
G
C
C
A
G
T
G
G
T
G
C
C
T
C
T
T
T
T
T
T
G
C
A
G
A
G
27200
A
A
C
T
G
C
T
G
G
T
T
G
C
A
A
T
T
G
C
A
A
C
T
G
C
C
G
T
C
T
G
C
T
G
T
C
A
A
T
G
A
G
G
T
C
T
T
T
G
G
27250
T
G
C
T
T
T
G
C
A
A
G
C
T
T
G
C
T
G
C
T
G
A
T
C
T
T
T
A
G
T
C
C
C
C
T
T
T
A
A
G
A
C
G
G
G
C
T
G
T
T
27300
A
A
T
C
T
T
T
A
G
C
A
C
A
A
G
G
C
T
G
A
C
T
C
T
G
C
A
A
T
A
C
A
G
C
A
C
A
C
A
C
C
A
G
G
T
T
G
C
C
T
27350
A
A
C
T
T
C
T
T
G
T
T
T
A
T
G
T
G
C
T
C
C
C
A
G
G
G
A
T
C
A
G
A
A
A
C
C
A
G
T
T
T
G
C
T
G
T
T
T
C
C
27400
C
C
C
T
A
A
A
A
C
C
A
C
A
A
G
C
C
T
T
G
G
G
G
T
C
A
T
T
G
T
C
T
C
T
A
T
C
T
G
T
C
C
T
T
T
G
T
T
C
T
27450
C
C
A
T
G
T
A
C
A
G
T
C
T
G
C
T
G
C
G
A
A
A
G
A
C
T
T
T
C
C
T
C
T
T
G
T
T
C
T
T
G
A
G
T
G
C
A
T
G
T
27500
T
C
A
C
C
A
T
C
T
T
C
C
T
C
C
A
T
C
A
T
T
T
C
C
T
T
T
G
A
A
C
C
C
T
C
A
G
T
A
A
C
T
C
A
T
A
C
T
T
A
27550
G
G
T
G
A
T
T
T
A
G
C
C
T
T
C
C
T
C
T
C
C
C
C
T
G
C
C
A
G
G
G
C
T
G
G
T
T
G
C
T
G
C
T
A
C
T
C
C
T
G
27600
A
A
G
G
T
A
T
A
C
T
A
C
C
C
C
A
C
A
C
A
T
A
C
C
A
T
A
C
T
T
G
A
T
T
G
T
T
A
A
A
C
C
A
A
A
C
A
T
T
A
27650
T
T
T
T
T
C
A
G
C
A
T
C
T
G
C
T
G
T
G
T
A
C
C
T
A
G
A
A
T
T
T
T
G
C
C
G
G
A
A
A
C
C
A
T
G
A
T
A
A
T
27700
T
A
C
A
G
A
C
C
A
A
G
T
A
T
A
T
G
G
G
C
T
T
G
G
G
A
T
T
C
C
C
T
T
C
C
T
T
T
G
G
G
G
A
T
G
C
C
C
A
G
27750
C
T
G
T
A
T
A
A
G
G
A
G
G
C
A
A
G
A
C
T
T
A
C
C
C
G
G
G
T
G
A
C
A
C
A
A
T
C
A
G
A
C
A
A
T
G
G
G
T
A
27800
A
A
A
T
G
T
A
G
A
T
A
G
T
A
A
A
A
T
G
T
G
G
A
C
A
A
A
G
C
C
C
T
G
T
T
C
T
A
G
G
C
A
C
C
A
T
A
T
A
A
27850
A
T
A
A
A
A
G
A
G
A
C
A
A
T
G
A
A
T
T
A
G
C
C
C
C
T
G
C
C
T
T
C
A
G
T
G
T
C
C
T
T
A
A
A
A
A
C
T
A
A
27900
G
G
A
A
A
C
A
T
G
T
G
A
G
C
A
T
T
G
G
C
C
T
G
A
T
A
T
T
A
A
C
A
A
A
C
T
A
C
T
C
T
A
A
G
A
A
T
T
T
T
27950
A
G
A
G
G
T
G
G
G
A
A
G
A
G
A
T
C
T
G
T
G
A
A
A
C
C
T
A
T
G
A
G
T
G
A
A
G
A
G
G
G
A
A
G
C
T
A
A
T
G
28000
T
G
G
T
G
G
A
G
G
T
T
G
C
C
T
T
T
G
A
A
A
T
A
G
A
T
C
T
T
C
A
A
G
G
C
T
G
G
G
T
C
C
A
G
T
G
A
C
T
C
28050 |
REPEAT
A
C
A
C
C
T
G
T
A
A
T
C
C
C
A
G
C
A
C
T
T
T
G
G
G
A
G
G
C
T
G
A
G
G
C
A
G
G
T
G
G
A
T
C
A
C
C
T
G
A
28100
G
G
T
C
A
A
G
A
G
T
T
C
G
A
G
A
C
C
A
G
T
C
T
G
G
C
C
A
A
C
C
T
A
G
A
G
A
A
A
C
C
C
T
G
T
C
T
G
C
A
28150
C
T
A
A
A
A
A
T
A
C
A
A
A
A
A
T
T
A
G
C
C
A
G
G
C
G
T
G
A
T
G
G
C
A
C
G
C
G
C
C
C
A
T
A
A
T
C
C
C
A
28200
G
C
T
A
C
T
G
G
G
A
A
A
G
C
T
G
A
G
G
C
A
G
G
A
G
A
A
T
C
A
C
T
T
G
A
A
C
C
T
G
G
G
A
G
G
C
A
G
A
G
28250
G
T
T
G
C
A
G
T
G
A
G
C
T
G
A
G
A
T
T
G
C
G
C
C
A
C
T
G
C
A
C
T
C
C
A
G
C
C
T
G
G
G
T
G
A
C
A
G
A
G
28300
C
T
A
A
A
C
T
C
T
G
T
C
T
C
A
A
A
A
A
A
C
A
A
C
A
A
C
A
A
A
A
A
A
G
A
T
A
C
A
G
A
T
C
T
T
C
A
A
G
G
28350
T
G
T
A
G
A
G
A
G
A
T
T
T
C
C
A
T
G
G
A
C
G
G
A
G
A
G
G
A
A
A
C
G
T
G
G
G
C
A
T
T
T
T
A
G
A
C
G
T
C
28400
G
G
C
T
T
T
C
A
T
C
T
C
A
T
T
A
T
T
A
T
T
T
T
A
A
C
A
C
A
T
A
T
T
T
A
T
C
A
C
C
T
A
C
T
A
T
G
T
G
C
28450 |
REPEAT
A
C
G
G
A
T
T
T
A
T
G
C
T
A
G
A
T
G
T
T
G
G
A
A
T
A
A
A
A
A
A
C
T
G
A
A
C
A
G
G
A
T
A
G
A
G
A
C
A
A
28500
T
G
C
T
A
T
G
A
G
C
A
A
C
A
C
A
G
T
A
G
T
G
G
T
G
A
G
G
A
A
A
G
A
C
C
A
A
G
T
G
A
T
G
A
C
T
G
G
G
G
28550
A
C
T
C
A
T
C
T
A
A
T
A
G
A
G
C
A
G
C
A
G
A
G
A
A
A
G
T
A
G
A
T
A
C
A
A
G
T
G
A
A
T
G
G
G
A
T
C
T
T
28600
G
G
A
A
T
T
G
T
A
C
T
A
A
A
T
T
A
A
C
A
T
G
A
G
G
G
G
A
G
A
T
T
T
C
A
T
C
T
A
G
C
A
T
G
C
T
C
A
T
T
28650 |
REPEAT
T
C
A
C
A
A
T
G
G
A
G
A
A
A
C
T
G
A
G
G
C
C
C
A
G
G
C
A
T
G
T
G
A
A
G
T
G
A
C
T
T
G
C
A
T
A
A
A
G
A
28700
A
T
A
T
C
A
A
G
G
T
T
A
A
G
T
C
A
G
G
A
G
G
A
G
C
A
G
A
A
A
A
A
A
A
G
A
C
A
A
T
A
T
G
G
G
G
T
T
T
G
28750
T
T
A
G
A
C
A
C
C
A
G
G
G
A
C
T
C
T
T
A
A
A
A
G
T
T
A
T
C
T
G
G
T
G
G
C
A
T
C
A
G
C
G
A
A
G
A
A
A
G
28800
G
T
T
A
T
C
T
T
A
G
A
G
C
T
T
G
C
A
A
C
C
A
G
G
G
G
C
C
T
G
G
T
G
A
G
G
A
A
G
C
T
G
T
T
G
A
G
G
T
T
28850 |
REPEAT
T
T
C
A
G
G
C
T
T
G
A
G
G
T
C
A
T
A
G
A
G
C
T
T
G
A
A
T
T
A
G
G
G
G
G
T
G
A
T
G
G
T
G
A
C
A
A
T
G
A
28900
A
A
G
G
A
A
G
G
A
A
T
G
C
A
T
A
T
G
G
C
A
G
A
C
T
T
C
C
C
G
A
A
G
G
A
A
G
G
A
T
C
A
A
T
A
A
A
G
A
T
28950
T
G
T
T
G
T
C
A
T
A
T
T
A
A
G
T
G
A
T
A
G
G
T
T
G
G
A
T
G
T
T
G
T
G
G
T
G
A
A
A
A
A
A
G
G
G
A
G
G
A
29000
A
A
A
A
T
G
G
C
T
G
T
G
G
T
T
T
C
A
A
C
C
T
T
G
G
G
T
G
A
T
T
T
G
G
A
G
A
A
T
T
T
G
G
G
C
T
T
G
G
T
29050
T
A
A
C
A
A
A
A
A
T
G
A
G
A
G
A
A
T
G
A
G
A
A
G
A
G
G
A
C
A
T
G
T
T
T
C
A
G
G
G
A
A
G
G
C
G
C
A
G
A
29100
G
A
G
G
A
A
T
G
T
G
A
T
G
C
G
C
A
G
A
T
T
G
T
A
A
A
G
C
A
G
G
T
G
G
G
G
C
G
G
C
T
G
C
T
A
T
T
G
G
A
29150
A
G
G
A
A
G
T
C
C
A
T
G
A
A
C
A
A
T
A
T
G
C
G
A
C
G
A
T
G
G
A
G
C
T
C
T
G
G
A
G
A
A
G
T
C
A
T
G
G
A
29200
G
T
G
C
T
T
G
A
T
A
A
G
G
A
G
G
G
G
T
G
T
C
T
T
C
A
A
G
A
A
C
A
T
T
G
T
T
T
A
T
T
T
G
G
C
A
A
A
T
A
29250
A
A
C
T
G
G
A
G
G
A
A
A
G
A
T
T
T
A
A
G
G
G
A
T
C
C
C
C
T
T
T
T
G
C
C
C
C
A
C
A
T
A
G
T
A
A
A
G
A
T
29300
T
T
T
T
C
T
C
T
T
G
C
T
T
T
G
A
G
T
T
T
G
A
T
A
A
T
T
C
G
C
C
A
G
G
C
T
T
C
T
T
C
T
T
G
C
C
A
A
T
A
29350
A
T
A
A
T
A
A
T
A
C
T
A
C
A
G
T
A
G
C
T
T
T
G
G
G
C
T
T
G
C
C
C
A
G
C
A
C
T
G
G
A
C
T
C
A
A
C
A
T
C
29400
T
T
A
A
G
A
C
A
A
T
G
T
T
A
A
A
A
A
C
A
T
A
G
T
T
T
T
A
C
A
G
A
G
T
T
T
A
A
T
T
A
A
A
A
A
A
A
T
A
A
29450
A
A
A
C
T
A
G
T
C
T
T
A
T
C
T
A
A
T
T
C
T
C
A
T
A
A
T
C
A
C
C
A
T
G
A
T
G
G
G
T
T
G
A
A
A
G
T
G
T
T
29500 |
REPEAT
A
C
C
T
C
A
T
T
T
T
A
C
A
G
T
T
T
G
G
A
A
A
G
T
G
A
G
G
C
T
T
A
A
A
T
A
A
G
T
A
A
C
T
T
G
C
C
C
A
G
29550
G
G
C
C
A
A
G
T
T
A
C
A
G
A
A
A
G
T
A
A
C
C
A
G
A
A
G
A
A
C
T
A
A
T
A
T
T
A
C
C
T
A
A
C
T
C
C
A
A
C
29600
A
G
T
C
A
A
A
T
T
C
G
T
A
A
T
C
A
T
T
C
C
C
T
T
A
C
A
C
T
G
C
T
T
C
C
C
A
A
T
T
A
A
T
A
C
C
T
C
T
A
29650
T
T
G
C
C
A
G
G
C
A
C
T
A
C
G
C
T
T
C
T
C
A
T
C
C
C
C
T
C
C
T
A
C
T
C
C
C
A
G
C
T
T
C
T
T
T
C
A
A
A
29700
T
T
T
T
C
C
A
A
A
T
G
C
C
T
G
G
A
A
T
T
A
T
T
T
C
T
G
T
C
T
T
CTTGTTTGC AATTTTCTCA
29750
AATTTTAAAA TCACAGGAAC CTCTCAAATT CAGGAAGTGT TCCCTGATTA
29800
ATTCCACCTC TACCTAAACA TCTAGCAG
A
G ACTTGACCTG ACTTTGTCCA
29850 |
var(29829):[C:0.14]
AGTAGATTTT GTATTATTTA GTGGAGAGAT CAGCATGAAT CTGTTCAGCC
29900
ACAGACTGGT CAACAGATCA GTTCATGCCC TACTGACCAC AGAGCTGTAG
29950
ACACTTCCAT TTGCAGAGGC TTGTACTTAA AAGCATATAT TAGAATTGTG
30000
AAACTGGGCA CTGTTTGTGA CATTCTTCAT CCTCACTGTG TATGTGGTTG
30050
ATACTCGTTG ACTGATTGAC TAAGATTTTT GCTGGCATTT GGTTGAGAAG
30100
GAAGGCAATT ACCAAGTATT GA
T
AATGCAT CTTAAACCTA GCTTTAAAGT
30150 |
var(30123):[C:0.06]
CTTTTATTGA ACTCTTGGGC ATGTCTTCAT ACTAAATTCA GTAGAATATG
30200
CCTGTTAGAT AAGTCTCCTG AGAGACAACT TTAGTGAGGA ATATAACTCT
30250
TTTTAAAATG CAATGGAATA TATGTATATT TCCCCAAATA AA
C
AATTTCT
30300 |
var(30293):[T:0.03]
TACAAATTGC ACGTAGCTGT GATCATTCCC CTTCCTTTAG TGGGCAGCAA
30350
ATCATGTTGC ATTTGTGTTA TGCATTTTTT CAGAAATATT TTGCCTTTTT
30400
TTTGTTTCTG GACCAAGGAG TCAAACCATG CCCCATTCAT CTTTTTCTTA
30450
TAT
A
C
A
A
T
T
C
C
T
T
G
C
A
C
A
T
A
A
T
A
G
G
A
G
C
T
C
A
G
T
A
A
A
T
A
T
G
TAACACTGCA
30500 |
REPEAT
|
var(30489):[C:0.14]
|
var(30490):[A:0.18]
TGGTATTCTC TCACCTACAT TATAAGCAGG GATAATGGCT TTTATTTCTT
30550
TTGGTTCCTG TGTTCTCCTA GCAACTCCCT GGTTTCTAGT TCAACATTAT
30600
GTCCATAAAA GGTACTCAGT AGCTGGTGAA TGAAGGAATG AATGAATGAC
30650
ATTTAACTTG TGATCATCTA AACCATTACT AAACCAAATT GGAAATATTT
30700
TTAGGGGACT G
G
GAAAATTA CCTGGGTAAC ATGAGCTGTT GAGCAGCTTC
30750 |
var(30712):[A:0.09]
TGGGCTGGGT CTGGTGAC
T
G TATCAAAATC TTCAGATACG TCAGTAATTC
30800 |
var(30769):[A:0.06]
CACTTCAGCA TGTTCATTCT TTGTTTCGAA TAATACAGGT TTTTGTGCAT
30850
TGATGTTTAA GATAAAGTGG TGCCTATTTT GCATTTCTAG TTATGTTTAC
30900
AAAACAGTGT TTTATTGCTG TCTAAACATG AGAGTGCTCT CAACCACTCC
30950
CACTGCAGCA CATTGAGAAA GGGCTGTTAG GAGTCTTTGC CCTTAGTTTG
31000
AAATATGTTG TACTTAGAGG TCGTAGTGTT CTGGTTTGGG
T
AGCAAATTA
31050 |
var(31041):[C:0.03]
TTGATCAGGG TATTATGGTA A
C
A
G
C
T
G
T
A
C
T
G
C
T
G
A
T
T
G
G
A
T
G
A
A
G
A
T
A
A
31100 |
REPEAT
A
T
A
T
C
C
A
A
G
C
A
T
G
C
A
A
C
T
G
G
T
A
T
T
A
C
C
T
G
A
C
A
T
T
ATTGTT TTTCCTGGGA
31150
GCCTAGTCAT CCCAAGGGGG TTTTATAAGA ATGGTCAGAA GGTAAATATT
31200
ACCAAGAGTC TAGTAGGCAG AGTGCAAGCC AGTGGTACCC AATTCTCTCC
31250
ATTCACCACT ATTTGAATTC TGGCCCTTGT GTTTTCCTGC ATTCATCTTT
31300
TGACTCTTTA TTTAGATTTC CTTGACTTTT TAGA
A
T
T
T
T
T
C
T
T
T
T
G
T
T
C
C
31350 |
NOT SCANNED
T
T
G
C
T
T
C
T
T
T
G
G
C
T
T
C
T
T
G
C
T
G
A
G
G
T
A
T
T
T
A
T
T
T
T
T
T
G
A
A
G
G
A
T
T
A
T
C
A
G
31400
G
A
A
A
C
A
A
T
A
G
C
A
T
T
G
C
T
T
G
T
A
A
T
C
T
C
T
C
T
G
C
C
A
T
T
G
A
G
T
T
T
A
G
T
G
G
T
G
C
T
31450
T
C
C
T
C
T
G
C
T
G
T
T
A
T
C
A
G
A
G
A
C
T
T
A
T
T
T
T
A
A
A
T
A
G
C
A
T
T
A
T
T
T
G
T
T
A
C
T
G
T
31500 |
REPEAT
A
T
A
T
A
T
T
T
A
A
G
A
T
A
T
A
G
A
A
C
A
T
T
A
T
G
T
T
T
T
G
A
T
T
T
A
C
A
A
A
C
A
C
A
T
A
G
T
G
A
31550
T
G
A
T
T
A
C
C
G
T
A
G
C
C
A
A
G
C
A
A
A
T
G
A
A
C
A
C
A
T
C
C
A
T
C
A
C
C
T
C
A
C
A
T
A
G
T
T
A
C
31600
T
T
T
T
T
T
T
T
G
T
A
G
T
A
A
G
A
G
C
A
C
C
T
A
A
A
A
T
C
T
A
C
T
C
T
C
A
G
A
A
T
C
C
A
G
T
A
C
A
A
31650
T
A
T
T
A
C
T
A
A
C
C
A
T
A
G
T
C
C
T
C
A
T
G
T
G
G
T
A
C
A
T
T
A
G
A
T
C
T
C
T
A
G
A
C
A
T
A
T
C
C
31700
A
T
C
C
C
A
C
A
T
A
A
T
T
G
C
A
A
T
T
T
G
T
A
C
A
C
T
T
T
G
A
C
C
T
T
T
A
T
C
T
T
T
C
C
A
T
A
C
C
T
31750
T
C
C
C
C
T
C
C
C
C
C
C
A
C
C
C
C
T
G
G
T
A
A
C
C
A
T
C
A
T
T
C
T
A
C
T
C
G
T
T
T
A
T
T
T
T
T
T
G
T
31800 |
REPEAT
T
T
T
T
A
A
G
G
T
A
G
G
G
T
G
T
C
T
C
T
T
G
C
T
C
T
G
T
T
G
C
C
T
G
G
G
C
T
G
G
G
T
G
C
A
G
T
G
A
T
31850
G
T
G
A
T
C
A
T
T
G
C
T
T
A
C
T
G
C
A
G
C
C
T
C
A
A
A
C
T
C
C
T
G
G
G
C
T
C
A
A
G
C
A
G
T
C
C
T
C
C
31900
C
A
T
C
T
C
A
G
C
C
T
T
C
C
A
T
A
T
A
G
C
T
A
G
G
A
C
T
A
C
A
G
G
T
G
C
G
T
G
C
C
A
C
C
A
C
A
C
T
T
31950
G
G
C
T
A
A
T
T
T
T
T
A
A
A
T
T
T
T
T
T
G
T
A
A
A
G
A
C
A
A
G
G
T
C
T
T
A
C
T
A
T
G
T
T
G
G
C
C
A
G
32000
G
C
T
G
C
T
G
T
T
G
A
A
C
T
C
C
T
G
G
C
C
T
C
A
A
T
C
A
A
T
C
C
T
C
C
C
A
T
G
T
A
G
A
G
T
T
C
C
C
A
32050
A
A
G
C
A
C
T
G
A
G
A
T
T
G
T
A
G
G
G
T
T
G
A
G
C
T
A
C
T
A
T
G
C
C
C
C
A
C
C
T
T
C
T
A
C
T
C
A
A
A
32100
G
A
T
T
T
C
T
T
A
A
T
T
G
T
C
T
A
A
C
T
C
A
A
A
A
G
C
C
C
T
T
T
T
T
C
A
G
G
T
C
C
C
C
A
T
T
C
T
T
C
32150
T
T
G
A
A
T
T
T
T
C
T
G
T
G
C
T
A
C
T
T
G
A
A
T
A
T
T
C
C
T
T
A
T
T
G
A
C
C
A
G
G
C
T
A
C
A
T
G
A
A
32200
A
A
T
T
C
T
T
T
C
T
C
T
T
T
T
T
T
G
G
T
G
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
32250 |
REPEAT
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
A
T
T
T
T
G
A
32300
G
A
C
G
G
T
G
T
C
T
T
G
C
A
C
T
C
T
C
T
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
T
G
C
C
A
T
C
T
C
G
32350
G
C
T
C
A
C
T
G
C
A
A
G
C
T
C
C
A
C
C
T
C
C
C
A
G
G
T
T
C
C
T
G
C
C
A
T
T
G
T
C
T
T
G
C
C
T
C
A
G
C
32400
C
T
C
C
C
G
A
G
T
A
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
C
C
C
G
C
C
A
C
C
A
C
G
C
T
G
G
G
C
T
A
A
T
T
T
32450
T
T
T
G
T
A
T
T
T
T
T
A
C
T
A
G
A
A
A
C
G
A
G
G
T
T
T
C
A
C
T
G
T
G
T
T
A
G
C
C
A
G
G
A
T
G
G
T
C
T
32500
C
G
A
T
C
T
C
C
T
G
A
C
C
T
T
G
T
G
A
T
C
C
A
C
C
C
A
C
C
T
C
G
A
C
C
T
C
C
C
A
A
A
G
T
A
C
T
G
G
G
32550
A
T
T
A
C
A
G
G
C
G
T
G
A
G
C
C
A
C
C
G
T
G
G
T
G
T
T
A
C
A
T
T
T
T
A
A
A
T
A
T
T
T
T
G
A
A
T
T
T
T
32600
T
G
T
T
A
A
T
G
T
T
C
T
T
C
T
T
T
G
C
A
G
T
C
T
C
C
C
A
A
T
T
T
C
C
T
T
C
C
C
T
C
T
T
C
T
T
T
G
A
A
32650
T
A
C
A
T
C
T
T
C
T
C
T
C
C
T
T
C
C
T
T
T
G
C
T
G
G
A
A
G
A
C
C
C
T
A
A
A
T
G
T
A
C
C
T
G
T
A
C
C
T
32700
T
C
C
C
C
T
T
A
C
A
C
T
T
T
C
A
G
C
A
T
T
C
A
G
G
C
C
A
A
C
T
A
G
A
G
A
T
A
A
T
T
G
G
A
C
A
A
G
C
C
32750
A
A
A
G
A
T
C
A
T
G
T
C
T
G
A
C
A
T
G
G
C
T
C
G
C
T
A
G
T
G
G
C
T
C
T
G
T
G
T
C
T
G
A
A
T
G
G
G
T
T
32800
G
G
C
A
T
C
A
T
C
T
T
T
A
A
G
A
A
T
C
T
T
G
T
C
T
T
G
G
C
C
T
A
A
C
T
T
G
G
G
A
C
T
G
A
C
A
T
T
T
T
32850
A
A
G
C
A
T
T
A
A
A
A
C
T
C
T
T
C
A
C
T
A
A
T
T
A
A
C
A
G
A
G
G
C
A
A
C
C
T
A
A
A
G
A
A
T
A
G
T
T
T
32900
T
T
G
A
A
A
T
G
A
T
G
C
T
T
G
A
G
T
G
T
T
C
T
C
T
T
A
C
T
A
C
A
T
T
C
C
C
T
G
G
G
A
A
T
A
T
T
C
C
C
32950
T
G
G
A
A
A
G
C
C
C
A
C
A
G
A
G
T
T
G
A
T
A
A
T
G
T
A
T
T
T
G
A
A
T
C
A
T
G
T
A
C
T
G
G
A
A
T
G
G
G
33000
C
T
A
G
T
A
T
T
A
A
A
A
G
T
T
A
T
T
A
C
A
A
T
A
C
T
A
T
T
T
T
A
A
T
T
T
A
T
A
T
T
T
A
T
A
A
A
C
T
T
33050
A
T
T
T
A
T
T
T
G
T
A
T
T
A
T
A
T
A
A
A
T
T
T
A
T
A
T
T
T
A
C
A
T
A
C
T
T
T
A
A
T
T
T
A
T
G
T
T
T
A
33100
T
A
T
T
T
A
A
T
T
T
A
T
T
C
T
A
C
A
A
A
A
T
A
T
A
A
A
T
A
T
A
A
A
T
T
T
A
C
A
C
T
T
T
A
A
A
T
C
T
A
33150
T
A
T
A
A
T
T
T
A
T
A
T
T
T
A
T
A
T
A
A
G
T
A
T
A
T
A
T
T
T
A
T
A
T
A
C
C
T
T
A
A
T
T
T
G
T
A
T
T
T
33200
A
T
A
T
T
T
C
A
A
C
T
C
A
G
C
C
A
G
T
C
C
A
T
A
A
A
A
C
T
T
G
T
A
G
T
T
A
T
T
T
T
T
C
C
T
G
T
C
T
T
33250
T
C
T
A
A
A
A
A
G
G
C
T
A
A
A
A
G
G
C
A
A
A
T
G
T
T
C
T
G
C
A
G
T
A
T
G
G
A
A
C
T
G
A
G
T
C
T
C
C
G
33300
A
G
T
T
A
A
G
A
G
G
T
T
T
G
C
C
A
G
G
T
A
A
T
T
G
C
T
A
G
C
A
A
T
G
A
C
A
A
A
G
G
T
G
A
G
A
T
T
T
G
33350
A
C
T
G
T
C
A
A
T
T
T
T
C
T
A
C
C
T
T
T
C
T
G
A
A
C
A
T
T
A
G
A
C
A
G
A
C
T
T
C
C
A
A
T
A
T
T
C
A
C
33400
A
T
A
T
C
A
T
C
T
C
T
A
T
G
T
G
G
C
A
T
T
T
T
C
C
A
G
G
A
C
T
T
T
C
T
T
A
G
G
T
C
T
T
C
A
A
A
A
A
C
33450
C
A
A
A
T
G
A
G
G
G
A
C
A
T
A
T
C
T
C
T
A
C
T
T
C
A
C
A
A
T
G
A
G
G
A
A
A
C
C
A
G
G
A
C
T
T
A
A
A
G
33500 |
REPEAT
G
G
G
C
T
T
G
C
C
C
A
A
A
T
T
C
C
C
T
G
A
G
G
T
C
A
G
C
A
A
C
C
T
T
C
T
C
T
T
C
T
C
T
T
T
G
T
A
T
C
33550
C
C
A
A
G
A
A
C
C
T
A
A
A
G
G
C
A
A
T
G
G
T
A
G
C
A
A
G
A
T
G
G
T
T
A
G
G
A
G
A
C
T
G
G
G
C
C
C
T
G
33600 |
REPEAT
T
A
G
T
C
A
G
A
C
A
T
G
C
C
T
G
C
C
T
T
T
C
A
A
A
T
C
T
T
A
G
C
T
C
T
A
C
C
A
C
T
G
A
C
T
T
G
C
A
G
33650
T
A
G
G
A
C
C
A
T
G
A
T
T
A
T
C
T
T
T
T
T
T
C
T
C
C
T
T
T
T
G
T
A
A
A
A
T
A
G
T
G
C
C
T
G
C
C
T
C
A
33700
G
G
G
T
T
A
T
T
T
A
T
T
C
A
T
T
C
A
G
C
A
A
A
C
A
T
T
T
A
C
T
G
A
T
C
A
C
C
T
A
T
C
A
T
G
T
G
T
G
A
33750 |
REPEAT
A
A
A
T
G
T
T
C
T
A
G
G
A
A
T
A
T
A
G
T
A
G
T
G
A
A
C
C
A
G
G
G
A
G
T
A
A
A
A
A
A
A
A
T
C
C
T
G
C
C
33800
C
T
C
C
T
G
G
A
G
C
T
T
A
T
G
T
T
C
T
A
G
T
T
G
G
T
T
G
T
T
G
T
T
A
A
A
A
T
T
A
A
A
T
G
A
G
A
C
A
A
33850 |
REPEAT
T
G
C
A
T
T
G
A
A
A
A
T
G
T
C
C
T
G
T
A
T
A
G
T
G
C
C
T
G
G
A
A
T
A
G
A
G
G
G
G
G
T
A
T
G
C
A
T
T
T
33900
T
G
A
C
A
G
A
A
T
T
A
A
G
A
C
A
A
A
G
T
C
T
A
C
A
A
A
C
T
C
C
T
G
G
A
A
G
T
A
A
T
A
G
C
T
T
T
T
G
C
33950
C
T
T
T
C
C
T
T
G
A
A
T
C
T
A
T
A
A
A
G
A
T
A
G
C
A
A
A
T
G
T
A
A
T
A
T
T
A
A
T
A
A
G
T
C
C
T
T
T
A
34000
C
T
T
T
T
C
C
A
A
G
A
A
C
C
A
T
T
T
C
A
T
T
C
C
A
C
G
G
A
A
A
G
C
C
A
T
A
G
T
A
G
T
A
T
T
T
A
G
C
C
34050
A
T
A
G
T
A
G
T
T
G
T
T
T
T
T
A
T
A
A
T
T
T
A
G
C
C
A
T
A
G
T
A
G
T
T
G
T
T
T
T
T
A
T
A
A
T
T
T
A
G
34100
A
G
T
T
C
T
T
T
G
G
T
T
G
C
A
A
A
C
A
A
T
G
G
A
A
T
A
G
A
A
A
A
C
A
A
A
G
A
A
T
C
A
A
C
T
C
T
A
G
C
34150
T
T
C
C
T
C
A
A
G
C
A
G
A
A
A
G
G
C
A
G
A
A
G
G
A
T
A
T
G
T
A
T
G
G
C
T
G
A
T
G
G
A
A
T
T
G
A
T
G
A
34200
G
A
G
G
G
T
G
T
T
G
A
A
C
T
A
G
G
C
T
T
A
G
T
A
C
C
T
A
A
A
A
G
A
C
C
T
G
G
A
G
C
C
T
G
G
G
A
A
C
T
34250
A
A
A
C
T
G
C
A
A
G
A
G
G
A
G
T
C
T
C
A
T
C
A
C
G
A
T
T
C
A
A
A
T
G
T
C
A
A
T
A
G
G
T
T
T
T
C
C
C
T
34300
A
T
T
C
T
G
T
G
C
T
A
G
C
C
C
T
G
G
A
G
T
G
G
T
G
A
G
A
A
T
A
G
T
G
T
G
A
G
G
C
T
T
T
T
G
C
T
T
A
C
34350
T
G
G
C
T
C
T
C
G
G
T
G
T
G
T
A
T
C
C
A
G
T
C
A
A
G
G
A
G
G
G
A
T
A
A
T
T
C
T
G
T
G
A
A
A
G
G
A
A
A
34400
G
T
G
T
G
G
T
G
C
A
T
T
T
A
C
A
A
A
T
C
T
A
C
T
G
G
G
C
A
G
T
C
A
A
G
A
A
A
C
A
A
C
C
A
G
T
G
A
C
A
34450
G
T
T
C
T
G
A
G
G
T
C
T
T
A
A
A
G
C
T
G
G
A
T
G
A
G
T
T
A
T
A
C
T
G
T
C
A
G
C
A
C
A
A
A
G
T
G
T
T
T
34500
G
A
C
A
T
T
A
A
G
T
A
A
A
A
G
A
A
T
G
G
G
G
T
T
C
T
T
G
T
T
C
C
C
A
A
C
T
A
A
A
C
A
G
T
G
G
G
A
A
T
34550
T
C
T
A
C
C
A
C
C
C
A
G
T
G
G
C
T
A
T
C
C
T
C
T
G
A
A
A
T
T
C
C
A
T
G
A
A
T
T
G
A
A
A
C
T
A
G
T
G
C
34600
T
T
A
T
G
A
T
T
T
A
G
T
T
A
A
T
A
T
A
C
A
T
T
T
A
T
C
T
G
T
A
T
G
C
A
T
A
T
G
C
A
G
A
T
A
A
A
T
G
T
34650
A
T
A
T
T
T
A
T
C
T
A
T
T
T
A
G
T
A
C
A
T
A
A
A
A
T
C
T
A
T
T
T
A
G
T
A
C
G
T
G
C
G
T
G
T
G
T
G
T
G
34700
T
G
T
G
T
C
A
C
A
C
A
C
A
C
A
C
A
C
G
C
A
C
A
T
A
C
T
A
A
A
T
A
G
A
T
T
T
T
A
T
G
A
A
A
C
T
T
C
A
T
34750
C
C
C
T
G
G
C
T
T
T
A
T
T
T
G
C
C
A
A
A
G
G
C
G
A
G
T
C
C
T
C
C
A
T
C
T
T
G
T
G
G
T
T
T
C
T
G
C
A
T
34800
C
T
C
T
T
T
G
G
C
A
T
T
T
G
T
C
A
C
T
A
T
G
C
A
C
T
T
G
T
T
G
C
C
T
T
T
T
A
T
A
T
T
G
T
C
A
C
A
G
G
34850
A
A
T
C
C
C
A
G
A
A
A
C
A
C
C
T
A
T
A
G
A
A
C
A
T
C
A
G
T
G
A
T
G
A
G
C
A
T
C
T
T
C
T
G
T
G
A
G
T
C
34900
C
A
G
T
G
G
T
G
C
A
C
T
G
G
C
T
C
T
G
G
G
A
A
T
A
T
G
G
A
G
A
G
A
C
C
T
G
T
T
A
C
A
T
T
A
C
C
T
T
C
34950
T
A
T
A
A
T
T
A
C
A
T
G
T
A
T
T
T
G
C
T
A
T
T
C
C
T
G
A
G
A
A
A
T
C
A
T
T
T
G
T
G
T
G
T
C
T
C
T
G
C
35000
C
A
G
G
A
A
A
C
A
T
T
A
G
C
C
T
T
T
C
C
A
T
T
T
T
T
T
A
A
G
T
T
T
T
C
A
A
A
T
A
A
T
A
T
A
T
G
T
A
G
35050
A
A
A
T
A
A
T
A
T
A
A
G
G
A
A
A
G
T
A
C
A
T
A
G
T
T
C
A
A
T
G
C
T
T
G
C
A
C
T
T
A
A
T
T
G
A
T
A
G
T
35100
C
A
A
T
A
A
A
T
G
G
C
A
A
T
T
T
G
T
T
G
A
C
A
T
T
C
C
A
A
T
A
C
C
T
T
G
A
A
C
T
T
C
C
T
G
G
A
T
A
G
35150
C
T
C
T
G
T
A
A
A
A
C
G
G
A
A
A
G
T
G
T
C
C
T
T
G
G
G
A
A
C
A
A
A
A
C
T
G
C
A
C
A
A
G
C
A
T
G
C
T
G
35200
G
T
C
A
A
G
A
T
T
C
A
A
A
T
T
C
C
A
G
G
G
A
G
A
A
G
G
T
G
T
T
C
A
A
C
A
G
C
C
T
G
C
C
C
C
T
G
G
G
C
35250
T
C
T
G
T
G
C
C
A
G
C
C
T
C
T
C
G
G
T
G
A
T
G
A
A
G
G
G
A
G
A
G
T
C
C
G
G
C
T
T
C
T
G
T
T
A
T
T
G
G
35300
C
T
C
C
C
C
A
G
T
A
T
G
T
A
T
T
C
A
A
T
G
T
G
T
A
C
C
T
T
T
A
A
T
C
A
A
A
G
G
T
A
A
A
T
T
C
C
A
T
G
35350 |
REPEAT
A
G
G
G
A
G
G
G
G
C
C
A
T
G
C
C
T
G
T
T
T
T
A
T
A
G
G
C
C
A
C
T
G
T
A
T
C
T
T
G
C
A
T
G
T
A
G
C
A
G
35400
T
T
T
C
T
A
G
C
A
C
A
T
G
A
T
A
T
G
C
A
C
C
C
A
A
G
A
A
A
C
A
T
T
T
G
T
T
G
G
A
G
A
A
A
T
G
A
C
C
A
35450
A
A
T
T
G
G
G
A
T
T
C
T
C
T
C
T
A
C
A
G
A
G
G
C
T
A
A
A
G
G
G
A
A
A
T
G
A
C
T
A
A
G
CTACTTGC
35500
TGAGTGGCTA TCATTAGTGC ATAATTTTCA AAAGCAATCA TAGAATGGGC
35550
AAGACGTTTA ATCTCTGTCA TGAAATGTAA CCTTTAGAGG GAAGACAAGC
35600
AATCACAATG TGACTTCTCC GAGTGTCCTG CAGCTTTGAG CATGGCCCGG
35650
GCCTCTCTCT GATGGGGCTG ATGAAAGCCA ACGAACAAAG GCATTTTGTA
35700
TGTTAAAACA AACCACATTT AGTCAACAGT GTTTGCAATG ACTAATCCCT
35750
GGTAAGAAAA CACCAAGAAG TGGCCTACAC CTCAAAAAAT ATAAGCACAG
35800
AGAATTCTTT CTTGGAATAC TGGCTGCAAA AGTTCAGCGT TTGGCATTTG
35850
C
A
ATGATTGC TGTTTGATTT TCTTTATGGT TGTGTTGGCA CATTCTGGAA
35900 |
var(35852):[C:0.03]
AGTCAGGAAG CTCAAGTATA TACTGTGGGA GCTCTATGGG GTGGGAATAG
35950
GAGATATACA AGCTTTGTTT TGTATTATAA CTATTGCAAC ACATTTCCAA
36000
ATGTCACTTT TTGTCCATGG TGGGAGAACC TGGGGATAGT TCAATGTCAG
36050
ATGGTTTCAA GTGACATAAC ACTAGTGCAG TAATTTATTT ATTCAATTAT
36100
TGTTTATTAA GTGTCTACTA TATGTTGAGT CTGGTGACAC TTTGGTTTTT
36150
CTGTGTTTAA ATTTTATTGT TTCATTCTGA TGTAGCACAT
C
C
C
T
T
C
C
T
G
C
36200 |
REPEAT
A
T
C
T
C
T
T
T
G
C
C
A
G
C
C
T
A
A
T
T
C
C
T
T
A
T
A
A
C
A
A
T
C
C
A
G
A
C
T
T
C
C
C
C
T
C
C
T
A
C
36250
A
T
C
A
C
T
T
C
T
C
C
C
A
A
A
C
C
A
C
C
A
A
C
A
C
C
T
G
G
C
A
C
C
C
T
A
C
C
A
C
A
G
C
T
T
A
G
G
T
G
36300 |
var(36251):[C:0.42]
C
C
T
C
T
G
A
T
G
T
G
G
G
C
C
C
T
G
T
A
G
A
A
G
C
T
T
T
A
C
A
T
T
C
T
C
C
C
A
G
G
A
T
T
T
C
T
C
A
A
36350
T
C
T
G
C
C
T
G
T
T
T
C
T
T
A
T
T
T
G
T
C
C
T
G
T
C
T
C
T
C
C
C
A
T
G
G
G
A
T
G
A
G
A
A
G
C
T
A
T
T
36400
T
A
A
G
G
G
T
C
T
G
G
G
C
T
A
T
G
G
T
T
G
T
C
A
C
T
A
A
C
C
C
A
G
T
A
T
C
A
T
T
A
C
T
T
A
A
C
T
C
A
36450 |
var(36415):[G:0.12]
G
T
G
T
C
T
G
A
A
A
T
A
T
A
G
T
C
G
G
T
G
C
T
T
A
T
T
A
A
G
C
A
T
A
T
A
T
T
A
A
A
T
G
C
A
T
G
CAG
36500 |
var(36467):[T:0.21]
|
var(36494):[T:0.03]
AATATGGAAT TAAATAAACC TGAAATTATT TTTTGGAGTA
C
ATTATACAA
36550 |
var(36541):[T:0.06]
TGCACAAGAG TAGGCATTTT TAGAAGCATC GAGCATAGTA GGTCCTTGCT
36600
TGTCCCAAGA GAGC
G
TTCAG TTAGCTAAGT AATCC
T
C
A
T
A
T
A
T
T
T
G
A
C
A
A
36650 |
var(36615):[A:0.19]
|
REPEAT
A
T
G
C
T
T
T
T
T
G
A
A
T
G
C
C
A
A
T
T
A
T
G
T
T
C
C
A
G
T TTACCATCTA TTTGGAAGTA
36700 |
var(36658):[C:0.26]
AAGATAAGTA TTTTAAAATA TAACTAACAT TAAAAGTCTT G
A
GTGGTAAA
36750 |
var(36742):[T:0.05]
AGCCAGATTC AAATAAGACA GTGAAGGGTC AGGGGTTGCA TGGG
T
A
T
A
T
T
36800 |
REPEAT
A
G
T
C
C
A
G
T
C
T
C
A
C
T
C
T
G
C
T
G
C
T
A
A
A
G
A
C
A
T
A
C
C
T
G
A
G
A
C
T
G
G
G
T
G
A
T
T
T
A
36850
C
A
A
A
G
A
A
A
A
A
G
A
G
G
T
T
T
A
A
T
G
G
A
C
T
C
A
C
A
G
T
T
C
C
A
T
A
T
G
G
C
T
G
G
G
G
A
G
G
C
36900 |
var(36881):[C:0.17]
C
T
C
A
C
A
A
T
T
G
T
G
G
C
A
G
G
A
G
G
T
G
A
A
A
G
G
C
A
C
A
T
C
C
T
A
C
A
T
G
G
C
A
G
C
A
G
A
C
A
36950
A
G
A
T
A
G
A
A
A
A
T
G
A
G
A
G
C
C
A
A
G
T
G
A
A
A
G
G
G
G
T
T
T
C
C
C
C
T
T
A
T
A
A
A
A
C
C
A
T
C
37000
G
A
T
C
T
C
A
T
G
A
G
A
C
T
T
A
C
T
C
A
C
T
A
C
C
A
T
G
A
G
A
A
C
A
G
T
A
T
C
G
G
G
G
A
G
T
G
C
G
C
37050
C
C
C
C
A
C
G
A
T
T
C
A
G
T
T
A
T
G
T
C
C
C
A
C
T
G
G
G
T
T
C
C
T
C
C
T
A
C
A
C
A
C
G
T
G
G
G
A
A
T
37100
T
A
T
A
G
G
A
G
C
T
A
C
A
A
T
T
C
A
A
G
A
T
G
A
G
A
T
T
T
G
G
A
T
G
G
A
G
A
C
A
C
A
G
C
C
A
A
A
T
C
37150 |
NOT SCANNED
A
T
A
T
C
A
G
T
G
G
G
T
G
A
G
G
A
T
A
T
C
A
C
T
T
A
G
G
C
T
G
G
T
A
A
A
G
T
A
T
T
T
C
A
A
C
C
T
A
G
37200
T
T
T
A
T
A
T
T
G
G
A
A
A
C
A
G
G
C
C
T
T
T
C
T
T
T
C
C
C
T
T
C
C
T
T
C
C
C
C
T
T
T
T
T
T
T
C
T
T
T
37250
A
T
A
G
C
T
T
C
T
C
A
T
T
C
A
T
C
C
A
T
C
T
G
G
G
A
T
T
T
A
C
C
C
G
G
T
G
T
C
T
A
C
C
A
T
A
T
T
C
C
37300 |
REPEAT
A
A
G
C
A
T
C
G
T
A
T
T
A
G
A
T
A
C
T
T
G
G
A
A
T
A
T
A
A
A
A
A
T
G
A
A
T
G
A
C
A
C
A
C
T
C
C
A
A
C
37350
C
T
C
A
G
G
A
A
A
T
A
C
A
C
A
G
C
A
G
T
A
A
A
A
A
A
A
A
A
T
T
T
T
A
A
A
G
G
T
G
A
A
T
C
T
T
G
C
C
T
37400
T
T
G
A
A
C
C
A
A
A
C
A
G
T
T
T
A
G
T
A
C
A
G
T
G
T
T
T
A
T
T
T
T
C
A
G
T
A
T
A
A
A
A
A
C
T
C
A
T
A
37450
T
T
T
G
T
G
G
G
A
C
A
A
G
G
C
C
A
T
C
T
T
C
A
T
T
T
A
T
A
T
A
G
T
T
C
T
T
A
T
T
C
C
T
T
C
T
C
T
C
A
37500
A
A
T
T
A
T
G
T
T
T
C
T
T
G
G
C
C
A
A
G
T
C
T
G
T
G
G
A
A
C
T
G
T
T
G
G
A
C
T
G
T
A
T
G
G
C
C
T
C
T
37550
C
A
G
T
C
A
A
G
C
C
A
G
A
C
A
C
A
G
C
T
G
A
G
A
G
G
C
C
A
T
C
G
G
A
A
A
C
T
T
G
T
A
G
G
A
A
T
T
T
C
37600
C
G
G
T
A
A
T
T
G
G
A
T
A
G
G
A
C
C
A
T
A
A
T
C
A
A
A
T
T
T
T
A
T
A
T
G
A
A
G
T
C
T
G
G
A
T
G
T
G
C
37650
T
G
A
T
G
A
T
G
T
G
C
C
T
T
C
A
T
T
T
C
C
C
A
G
G
T
C
A
G
A
G
G
G
A
A
A
A
T
C
T
G
G
A
T
G
C
C
T
T
A
37700
A
T
A
C
A
C
C
C
A
A
A
G
G
T
T
A
G
G
A
G
A
G
G
C
C
T
T
T
T
C
T
G
A
A
A
T
T
G
T
T
T
T
C
A
A
A
G
G
G
A
37750
T
T
T
C
C
A
T
G
A
C
C
A
A
A
A
T
A
A
C
A
T
A
A
C
T
A
T
G
C
T
A
A
A
A
A
T
T
C
T
G
T
G
A
C
C
T
G
A
T
A
37800
A
G
A
A
A
T
C
C
C
T
T
G
C
C
T
G
G
A
T
T
C
C
T
G
G
C
A
A
C
A
T
T
A
C
T
T
A
A
A
A
C
T
A
A
A
A
A
T
G
A
37850
T
T
C
T
C
T
C
T
T
C
T
C
A
G
A
A
C
T
A
A
C
A
C
T
C
A
G
T
A
T
C
G
G
A
C
T
G
A
C
T
T
A
T
C
T
G
A
C
A
C
37900
T
T
G
T
C
A
T
G
T
A
C
A
C
A
T
G
G
C
C
T
T
G
T
G
T
C
A
T
T
A
G
T
T
G
T
A
T
T
T
T
C
A
C
T
G
C
T
C
C
T
37950
G
T
C
T
C
A
C
T
C
C
C
T
T
G
A
C
T
A
G
A
T
T
A
T
A
A
A
C
T
C
T
T
T
G
A
G
G
C
T
A
A
T
A
A
A
A
A
T
A
A
38000
T
A
C
A
G
A
C
A
A
T
A
G
C
T
A
A
T
A
T
T
T
A
T
T
G
A
G
G
G
T
T
T
C
T
A
T
G
T
G
C
C
A
G
G
C
A
G
T
A
T
38050 |
REPEAT
T
C
T
A
A
G
C
A
C
T
T
T
A
T
A
C
G
T
T
T
C
A
T
T
T
A
A
T
T
T
T
T
A
C
A
A
C
A
A
C
C
T
G
T
G
A
G
G
C
A
38100
G
G
T
A
T
T
T
T
A
T
C
A
T
T
A
T
C
T
T
C
C
C
T
G
T
G
T
A
T
G
G
G
G
A
A
C
T
G
G
T
C
C
C
A
G
A
C
A
A
G
38150
T
T
C
A
G
T
A
G
C
T
T
G
C
C
C
T
A
G
G
T
C
C
C
C
A
A
T
C
C
T
A
G
T
A
A
T
T
G
A
C
A
G
A
G
C
T
A
G
G
A
38200
T
T
C
A
T
G
C
C
C
A
G
G
C
A
G
T
C
T
G
A
C
T
G
T
A
G
A
A
C
C
T
G
T
A
C
C
C
T
T
G
T
T
T
A
C
T
T
T
A
T
38250
T
G
T
T
T
G
T
C
T
T
C
T
C
T
A
G
A
T
G
T
C
T
T
G
T
G
C
T
T
T
A
C
T
A
C
A
T
G
C
T
G
A
C
T
T
G
C
A
T
G
38300
T
G
G
A
A
G
A
T
A
C
T
C
C
A
G
A
A
A
T
T
A
A
A
T
C
G
T
T
G
T
T
T
T
A
T
C
A
G
A
T
A
G
T
T
T
T
C
T
A
A
38350
A
T
G
T
C
T
C
A
T
A
A
T
C
C
T
A
T
C
A
A
G
T
T
T
C
T
G
T
C
T
A
T
C
C
T
T
C
T
G
G
G
T
A
G
G
A
G
A
T
A
38400
T
A
A
G
G
C
A
G
T
T
G
T
T
A
T
T
G
T
C
T
T
A
A
T
A
T
T
C
T
T
G
G
T
G
A
G
A
G
T
A
T
A
A
A
G
G
A
T
A
A
38450
G
G
G
T
T
T
A
T
T
T
C
A
G
G
T
A
C
A
G
C
A
A
A
G
A
A
T
T
T
T
C
T
A
C
A
G
A
A
A
T
C
C
C
T
C
C
T
C
A
T
38500
T
A
T
C
A
C
C
A
C
T GAAAATTCAC AGTGCCTAAG TGCTTATCAG GTTCAAATAT
38550
GATGGAAACC TGTCCCATCT CCAAATTTGA GATTCCTCTT GTACACATCT
38600
AGGACATTTG AGTACCTCCT CAAAATGTGT CTCATTGATC TGAGGTAACA
38650
TAGCAGATGT AACTTAGGAA GTCTTTATTT TCATTTCTTT AACAAGTAAT
38700
AGTCCTTTGG ACCATTGTAA TAGAACACAT AAAGTATAAT GACCCTAAGT
38750
TAATGTTGTT TTATGCTTTA TTTTCTGTAC C
A
TGTTTCTA TCTTACATGT
38800 |
var(38782):[C:0.41]
CTCTCACTTT
T
CCCCCTTTA AAAGATGTTC TAGGGAGTGC CTGCCACTAA
38850 |
var(38811):[C:0.40]
AAACTAACCC CTTTCTGTAC TTTCCTTTAA TCGAACTATG AAATTTTGTG
38900
TATTTAAAAA TTTTGATTGT ATTTTGCTTT CTATAATGAA AACCTTCTTC
38950
TAATATAGAA AACCAGTATC CTAAATGCTA AATGCTTAAT TAAAAAAATT
39000
CTTTTACAAA TTTCTTATAT AAAAAGGAAA ACCTGTGAAA GGAAATCTCT
39050
CAGCTCCAGA ATCAAATTAA CAAATAATTT TGATTGGAAT TATTTCATGC
39100
AGACCATCCT GTTAACCTGC AAAAGACAAA GTGCATTATA GTTTTTTTTT
39150
AGGGCAGTGA TGATGTAGCT GGAAGTTGAA ATAATTGGTG TACAAATACA
39200
TGTGCAAACA CGCACACA
C
G
CATATGCCTG TCTGGGTCAT GTGTCTTGTA
39250 |
var(39219):[T:0.33]
|
var(39220):[A:0.01]
CATATCTATT TCCCTAAAGG CTGATAAAAA TGTGCTCA
C
G AAAAGATAAA
39300 |
var(39289):[T:0.09]
AACTAGGCTT TATATGGTAA GTATAAAACA TGGCATGATG CTGTATAATA
39350
CTTTAAAAGA GTTATGTTGG TGTGCTTAAC CAATATTTCA TGGGAGAAGA
39400
GAACTCGAAT AGGATCTTAA GCTTTAGGAT TTCTATGAAG AAAAAAAAAC
39450
GGAGAAAACT ATTTTATAGT GAAGAT
A
C
C
A
A
A
A
T
G
T
G
G
A
G
G
T
A
G
A
A
A
A
A
T
39500 |
NOT SCANNED
G
G
G
G
G
A
G
G
G
T
G
G
A
T
T
T
T
T
A
A
A
A
C
G
A
C
A
A
T
C
A
G
A
G
G
A
G
A
G
T
G
A
C
T
C
C
A
G
T
G
39550
C
T
C
A
T
G
G
G
A
G
G
T
A
G
G
C
A
G
G
A
A
A
G
A
G
A
A
T
G
A
G
T
G
A
T
G
T
G
G
C
C
T
T
G
A
T
G
G
G
G
39600
A
G
C
A
A
G
T
A
C
A
A
T
G
A
A
G
A
C
T
G
C
C
A
T
G
A
A
A
A
T
T
C
T
A
T
G
T
C
A
G
G
G
C
T
G
T
A
G
G
G
39650 |
REPEAT
G
T
G
G
A
G
A
C
A
G
T
G
G
A
A
A
T
C
T
G
A
G
G
A
G
A
G
C
A
G
C
C
T
C
T
C
T
G
T
A
A
A
G
T
G
A
T
C
A
G
39700
C
T
C
C
T
C
C
T
C
A
A
A
T
C
C
C
A
G
C
T
T
C
T
C
T
A
G
A
T
C
T
T
C
A
G
A
T
T
T
A
T
T
T
T
T
T
A
A
A
A
39750
G
C
A
G
A
A
A
T
T
T
C
A
G
A
T
A
C
A
A
T
T
T
G
C
G
G
T
T
C
A
A
T
A
A
C
T
G
T
T
G
T
T
A
A
G
T
A
A
T
C
39800
T
A
A
T
A
A
T
G
T
T
T
A
A
A
A
A
C
C
T
T
T
T
G
T
A
G
G
C
A
A
A
A
C
C
A
T
G
C
T
C
A
C
C
A
A
A
T
G
A
A
39850
A
C
G
T
A
T
G
T
C
T
G
G
A
C
T
G
G
T
T
C
C
T
C
C
T
G
A
A
G
A
C
C
T
C
T
A
G
T
T
T
G
A
A
A
C
T
T
G
A
G
39900
C
T
A
G
A
A
A
G
A
A
T
G
A
A
A
T
A
A
T
T
C
T
A
C
A
T
T
T
T
A
A
T
T
C
A
A
A
A
T
G
T
T
G
T
G
G
T
C
T
G
39950
C
C
T
C
C
T
T
A
G
T
G
G
G
G
A
T
T
A
A
T
T
G
T
A
A
T
G
G
A
A
C
A
G
A
A
T
A
T
T
T
A
T
G
C
C
C
T
G
C
A
40000
T
G
A
T
G
G
G
G
A
C
A
A
G
T
A
G
A
A
A
A
A
T
G
T
G
C
T
G
A
A
T
T
G
A
T
G
G
A
G
A
A
A
A
C
T
A
G
A
A
C
40050
C
T
G
G
C
T
T
C
T
G
A
A
A
C
T
C
T
T
G
G
T
T
G
T
G
G
A
C
C
A
G
C
T
T
G
A
G
C
A
T
T
A
C
C
T
G
G
A
C
G
40100 |
REPEAT
C
T
T
G
T
T
A
G
A
G
A
T
T
C
A
G
A
A
T
T
T
T
A
A
G
C
T
A
T
A
C
C
C
T
A
A
A
C
T
T
C
C
T
G
A
A
T
T
A
G
40150
C
A
T
C
T
G
C
A
T
C
T
T
A
A
C
A
A
C
A
T
C
T
T
C
A
G
G
T
G
A
T
T
C
A
T
A
T
G
C
A
C
A
T
T
A
A
T
G
T
T
40200
A
A
A
G
A
A
G
C
A
C TGGATGTAGT ATACTTAATG TTCTTGTTTT AAAATAGCTT
40250
CTGTAAGACA CAGCATACAG CAAAAGTTTG AAGAGAGAGC AAAATCTCAG
40300
AGAATCTTTG GTGTAACTAG TGAAACATGA GACAATAAAA AGGTTCACTC
40350
TTACTGAAGC TTGAACAGAG CAGTTAATAT GGTAATGTTG ATATATTTAG
40400
TAATGCGTTC ACAGTGTTAA GTTTTTTGCA AGAACTGGTG TGCCAAGCAC
40450
AAGACTCAAC ACAGGTTATG CACATATTTG GTAATCAGTA AATTACCTTA
40500
GATAGTAAGT CAGTTGTTGA ATCCTGGACA ACTGATAACA TCATTTGCTT
40550
TCACGTGTTT TTTCAATATT GTGCTCAGCC TCAAATATAA ATTGAATAGA
40600
GTGACCCTTT GATACTCTAT GAAATCGACT GCATTTCCTA AGATTCTGTG
40650
GTTTCAATTA CCATAAATTT TTGATATTGG GTCCATAGCC
A
TTGCATTGT
40700 |
var(40691):[G:0.40]
CCCAGCATAA CAATATCTTA TCATCTTATC ATTGGTTCTG ATAATACAGT
40750
CTGCATCAGC ACAACATATT GTTACTAATA TTGTATGTGT GTGAGCATGT
40800
GTGTGTGTAT GTTCCCAGTC AGAACATCAT GTCAAGTGCA GGAGCAATCT
40850
GCAGTTTACC TAGATTAAAT
C
GAATCACTA TGTGTATTGC AAAATGAGAA
40900 |
var(40871):[T:0.03]
TTATTTTTGT TCCAGTGATG AAATTGTGTT CTAGGTTGCT AGCTGGATCT
40950
TGAGTTTGTG AGATGGATAA GTCCATTAGT GGTTCCTCAC TTTATTAGCA
41000
ACTTAATTGT CAGAATGTAA TGAAACTTCT GAACTGCAGC AACTCATTAG
41050
AAGCAATGAA ACACATGACA TTTTTTCTAG AATATTCAGT GAGCTACTTT
41100
TTCCCCCAAA GAGATCTTGA AAATAAAATT AACAATTAAG TTTAAATGTA
41150
TACCTATAAA GGTAAAACAG TTTTGAATTC TGCCCTGAAA AATGTTCTGG
41200
ATAAGTTAGG GTC
A
C
T
G
A
A
A
A
G
A
G
G
G
G
A
A
C
C
A
G
C
A
T
T
T
G
A
A
T
T
C
C
T
A
C
T
C
41250 |
REPEAT
A
G
A
C
A
C
A
T
G
T
T
T
A
A
G
T
A
A
C
C
T
T
T
A
A
T
G
A
G
T
T
A
C
T
T
A
G
C
T
T
C
T
T
T
A
A
A
C
C
T
41300
C
A
G
T
T
T
T
C
T
C
A
T
A
C
G
T
A
A
A
A
A
G
G
T
G
A
T
T
T
A
A
T
A
G
T
T
A
T
T
T
C
A
A
A
C
T
A
T
C
A
41350
C
T
A
T
G
A
A
G
A
T
A
A
A
A
G
G
A
A
G
C
G
G
C
G
T
G
T
G
G
A
A
A
G
G
G
C
T
T
G
A
C
A
G
T
A
T
C
C
C
T
41400 |
var(41370):[T:0.03]
A
G
T
G
C
A
C
A
G
C
A
A
G
A
G
C
G
T
A
T
C
A
A
T
G
A
C
C
G
C
T
A
T
T
G
T
C
A
C
T
C
T
T
T
A
A
T
T
T
T
41450 |
NOT SCANNED
C
A
A
C
C
T
A
G
A
T
A
T
T
T
T
A
A
T
T
C
T
C
C
T
G
C
C
T
T
T
G
C
C
T
T
G
A
A
A
T
A
A
G
T
T
T
G
A
T
T
41500
T
T
A
T
T
T
C
T
T
C
A
A
G
G
C
C
A
A
A
G
A
T
G
T
A
A
T
C
A
T
T
A
A
A
G
A
T
C
A
T
G
T
A
T
C
C
C
A
C
T
41550
G
T
A
T
T
T
T
C
T
A
C
T
A
G
A
A
A
C
A
A
G
G
C
T
A
G
A
A
A
G
A
A
G
G
C
T
G
T
A
C
T
T
T
A
C
T
G
C
C
A
41600
T
G
C
T
T
G
T
A
C
T
T
T
A
T
A
G
A
A
A
T
T
G
T
T
G
G
T
G
T
C
T
A
C
C
A
A
A
G
C
A
G
G
A
G
T
T
T
A
C
T
41650
T
T
T
A
G
T
T
C
C
C
T
G
G
T
A
G
A
T
C
G
T
G
G
T
T
G
T
T
T
T
C
A
C
T
T
G
G
C
C
T
T
T
A
T
G
A
C
A
A
T
41700
A
T
T
A
C
T
C
T
G
A
G
C
A
C
T
G
T
C
A
C
A
G
A
A
G
C
T
C
A
A
A
G
A
A
A
A
T
T
C
T
T
G
C
T
T
C
T
C
T
T
41750
C
T
T
A
T
G
C
T
T
T
A
T
T
T
T
A
G
C
G
A
C
A
G
C
T
C
C
C
A
A
A
G
A
T
G
A
T
C
T
T
G
G
C
A
A
T
G
T
A
T
41800
A
A
G
A
A
G
C
A
G
T
A
C
A
A
G
C
A
T
T
G
C
A
A
G
T
G
G
T
G
A
T
T
A
A
A
C
C
T
T
T
A
A
C
T
T
A
T
A
T
T
41850
T
C
A
A
A
G
A
T
A
G
C
A
T
T
A
G
G
T
T
G
G
T
G
C
A
A
A
T
C
T
A
A
T
T
G
C
A
G
T
T
T
T
T
G
C
C
A
T
T
G
41900 |
REPEAT
A
A
A
G
T
G
A
T
G
A
C
C
A
A
A
A
C
C
A
C
A
A
T
T
A
C
T
T
T
T
G
C
A
C
C
A
A
C
C
T
A
A
T
T
A
T
T
T
C
C
41950
T
G
A
A
G
C
C
C
G
T
A
G
C
T
C
A
A
A
C
A
A
A
C
A
G
T
G
T
G
A
T
A
T
G
A
A
A
A
G
A
G
T
A
T
T
T
C
A
T
T
42000
T
C
C
A
T
C
A
A
A
A
A
G
C
G
A
A
A
A
T
A
A
A
A
T
T
A
T
G
G
A
T
A
A
T
T
C
C
A
T
T
C
T
C
C
T
T
C
T
A
A
42050
C
T
C
C
C
T
G
T
T
C
T
G
A
T
T
T
T
T
T
C
T
T
T
T
C
T
T
T
C
T
C
T
T
C
T
T
A
T
T
T
T
C
A
T
T
T
T
T
G
T
42100
C
T
A
T
T
T
T
T
T
T
C
C
T
T
C
A
T
T
C
A
A
C
A
T
T
T
A
A
A
T
A
A
T
T
A
T
A
C
G
A
C
A
T
T
A
C
A
G
A
C
42150
T
A
A
T
G
A
C
T
G
T
A
C
C
G
T
G
C
A
G
C
G
A
G
G
A
T
T
C
T
G
T
A
A
A
C
A
T
C
A
T
G
A
G
G
A
C
A
G
G
A
42200 |
REPEAT
G
C
A
G
T
G
T
C
T
G
T
T
A
G
G
G
C
C
A
C
T
G
C
T
G
T
G
T
C
C
T
C
A
C
A
T
G
C
A
T
G
A
A
A
C
A
C
C
T
G
42250
C
C
C
T
C
C
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
T
T
C
T
A
A
A
T
C
T
A
C
A
A
A
T
A
A
A
T
A
C
A
A
G
A
A
G
G
42300
A
A
T
A
A
A
T
G
A
G
T
A
A
A
G
C
C
A
A
A
T
G
A
A
A
C
A
A
G
A
C
T
A
T
G
A
C
C
T
T
C
A
A
A
G
A
G
C
T
T
42350
A
A
A
T
A
T
G
T
A
T
T
A
T
G
G
C
C
C
C
T
T
T
T
C
T
T
T
T
T
A
A
A
A
A
T
A
T
T
A
T
C
C
A
G
A
A
T
T
A
A
42400
A
G
T
A
A
A
A
T
G
C
T
T
G
C
T
A
T
A
T
T
T
A
C
T
A
A
A
G
G
T
T
C
T
A
T
T
C
T
C
T
C
T
A
G
T
C
T
T
A
T
42450
T
T
T
T
A
T
G
T
A
A
G
A
T
A
A
A
T
C
C
A
T
T
T
T
T
T
C
T
T
C
C
C
T
T
A
T
C
A
T
C
T
T
C
A
A
A
C
A
C
A
42500
A
T
A
A
A
C
T
T
T
T
C
T
T
T
T
T
C
A
T
C
T
G
T
A
T
C
C
C
C
T
G
T
T
T
A
T
A
T
T
T
G
C
T
A
T
G
A
T
T
C
42550
A
G
T
G
G
T
T
T
T
T
G
A
T
T
T
T
T
T
A
A
A
T
G
A
C
A
G
T
T
T
T
G
T
C
C
T
A
G
T
T
C
A
G
C
T
A
T
T
C
C
42600
A
A
A
T
T
G
A
A
G
G
C
A
A
T
A
T
C
T
G
T
G
A
G
C
C
T
T
T
T
T
A
T
C
A
G
C
T
A
T
G
C
G
A
T
A
G
T
C
A
A
42650
T
T
T
A
T
T
A
T
G
T
A
A
G
T
A
G
A
A
A
G
G
C
C
A
T
G
T
A
T
T
C
A
G
G
G
C
T
A
A
A
G
A
T
T
G
T
G
A
T
A
42700
T
G
G
C
T
C
A
T
C
T
T
A
G
G
T
A
A
C
A
G
A
T
T
A
A
G
T
T
C
A
C
A
T
G
G
C
A
T
A
C
G
G
T
T
T
C
C
T
A
G
42750
C
G
T
T
C
C
T
T
C
T
T
A
A
G
T
T
A
T
G
T
T
C
T
T
T
T
A
T
T
G
C
C
A
G
C
A
T
A
A
C
A
T
T
T
T
G
A
A
A
A
42800
C
A
A
T
T
T
T
A
A
A
T
A
A
C
G
A
A
C
A
T
C
A
T
T
A
G
A
G
G
A
A
T
A
G
T
A
G
G
A
A
A
T
T
T
T
T
A
T
C
T
42850
G
A
T
G
T
A
T
T
A
C
G
G
T
G
C
T
C
T
T
T
A
T
G
C
T
C
A
G
T
G
T
C
T
C
A
T
T
T
A
A
T
C
C
T
C
A
C
C
A
C
42900 |
REPEAT
A
A
T
T
C
T
A
T
G
A
A
G
C
A
G
A
T
G
T
C
T
C
C
A
T
T
T
T
T
T
T
C
T
T
T
G
A
G
A
C
G
G
A
G
T
C
T
C
A
C
42950 |
REPEAT
T
C
T
G
T
C
G
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
G
G
C
A
A
T
C
T
C
G
G
C
T
C
A
C
T
G
C
A
A
G
C
43000
T
C
T
G
C
C
T
C
C
C
G
G
G
T
T
C
A
T
G
C
C
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
C
G
A
G
T
A
G
C
T
43050
G
G
G
A
G
T
A
C
A
G
G
C
G
C
C
C
G
C
T
A
C
C
A
C
G
C
C
C
G
G
C
T
A
A
A
T
T
T
T
T
T
G
T
A
T
T
T
T
C
A
43100
G
T
A
G
A
G
A
T
G
G
G
G
T
T
T
C
A
C
C
G
T
G
T
T
A
G
C
C
A
G
G
A
T
G
G
T
C
T
T
G
A
T
C
T
C
C
T
G
A
C
43150
C
T
C
G
T
G
A
T
C
T
G
C
C
C
G
C
C
T
C
G
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
A
T
G
T
C
43200 |
REPEAT
T
C
C
A
T
T
T
T
T
A
C
G
T
T
G
A
T
A
G
T
A
C
T
G
G
G
A
T
T
C
C
A
G
G
G
C
C
C
A
G
A
T
G
C
C
T
T
C
C
T
43250
C
A
A
G
G
A
C
A
C
A
G
G
C
C
T
G
T
A
T
A
T
G
A
C
A
G
A
A
T
T
G
T
A
A
C
T
T
G
A
A
A
C
C
C
T
T
T
T
T
T
43300
T
C
T
A
A
G
G
C
T
A
A
A
T
C
C
C
A
T
A
A
G
A
C
T
T
T
G
A
G
T
C
T
A
C
T
A
C
T
T
T
G
G
A
A
A
T
A
T
T
C
43350
A
C
A
A
T
G
G
G
C
A
T
A
A
T
A
T
T
G
A
T
A
G
G
A
A
C
A
G
C
A
G
C
A
A
A
A
A
A
T
G
A
G
A
G
G
T
C
C
T
G
43400
A
G
T
T
A
A
T
G
T
T
T
C
A
A
G
A
A
T
A
T
T
G
A
A
T
G
C
T
C
T
T
C
C
G
G
G
G
A
C
A
A
A
T
T
G
A
G
C
A
G
43450
C
A
A
T
T
G
A
C
G
C
T
G
A
A
A
T
G
G
C
A
C
T
G
A
A
T
T
A
T
T
T
T
G
C
T
A
T
C
A
A
T
T
G
C
T
A
A
A
G
C
43500
C
T
T
A
T
G
T
T
T
T
C
A
T
A
T
C
G
T
G
T
G
C
A
G
A
T
C
T
A
T
T
C
C
A
G
G
G
C
C
A
C
C
T
C
T
A
G
C
T
G
43550
A
T
A
G
C
A
T
C
A
G
A
T
C
T
T
T
C
A
C
C
C
C
T
G
A
A
G
A
G
A
T
T
A
C
AGCTGG CTAACATTAT
43600
CCTCACAAAC AGACCTGGAA AGTTTGTCTA CAACCACTGA TGGGAGCTCA
43650
GGCAAAGAGG ACTCTGGGAG AGGGTTAGCT CGAGGGCATC ATGATTTCTC
43700
TTCTGCTTCT GTGGCTTTGC TCTAGAGTCT CAGACCAATG CTGTCATTGT
43750
TTTTATGCCG GTTGTTATAG TCTACTTGCT ACTGTGAGGT GCTGTGAGGA
43800
AGAAATAAAT TTAAGTCAAG TTTGTAACTA TATAAGCATG GTACGAATTC
43850
AGTAAATATT GCTTGAATGA TTTTATCTGA GAGGCATGAA TATTTAGCAC
43900
TACATTTTTA TATAATGCTG CTTAACTCTT CCTTAAAGCA CATAATGATC
43950
ATGCTATTTT TTATGTCCTG TAACCTTATG GGACAACTAT G
G
CAGATTTC
44000 |
var(43992):[A:0.20]
ACTTCTGCCT
T
T
T
T
A
C
A
G
A
T
C
A
A
A
A
A
A
T
T
A
A
G
G
C
C
C
A
G
G
G
A
A
G
A
C
A
A
T
T
T
44050 |
REPEAT
G
A
A
A
G
C
A
G
G
G
C
C
A
C
A
A
A
G
T
T
G
T
G
T
A
G
A
C
C
T
G
G
G
CTGACTT TGATTAATTA
44100
TTTAATCACA CTTTAGCTAT TTCTCTTCCC ATTTTCTCAT GTATGGCATA
44150
CACAAACACA CTCTGGGGTT CTTTATTTTT ATATATTTTT AAGAATAAAA
44200
TGCTCATTAC AGAAAACTGG AAAAAGACAA ATTG
A
CTTAA AGTCATCTGA
44250 |
var(44235):[G:0.32]
AATCTCACCT TCTTGTAATA TTTTGGGATT CATTCTTTTA GGCTTTTTCC
44300
AGTATCCATG CATAGATCAT GGACTGAACA AGTGCTATTT GACAACTGTC
44350
TTGATTCGTT TCATAATATT TAATGGCTAT GTTTCATTTT AACAAAGGTA
44400
TACCTATATA ATTGTTTTAA TGGGTATCAA GCATTTCACA GTATGAGTTC
44450
CCTGGTTTTC TTTTTATCTT TAAACCCAGG TACTCATTGC TTACACAGCC
44500
TATGGTCAGA GGTAACTCTA ATGTGATCTG TGATTCTTTG TTTTTAAAGG
44550
TGTTCAATCT GATGGCAGTA GTCATTGTAA TAAGACTTTT GGCTGGCGGG
44600
TGTTGCCATC ATACACTAAA GAGATTTCAT GACTTAAGAC ATTTCATGGA
44650
CTCACAAGTA CTGAAACAGG GTATGAGTGG TAATGGAGGA GAGAACTGTG
44700
ACTCAGGAAA GAAGACTCCT TCGGTCAAGG GGCCAGACTT GGTATGCACT
44750
GGACAAAGAT AAAACATCAT GTTCTGTGGC ACATGTGAGG GATTCTGGGC
44800
ATCTCAGTAT GCCACAGCTG GTTCTCACTG ATGGGCAAGC CTTCTCCTTC
44850
AGCCTACACA TTAGATCATA ACAAATATTC TCACCTTTCC TCAAAGTTTT
44900
TATTATTTAA TCTTTTACAG GT
G
T
G
A
T
T
C
T
T
A
G
T
C
C
T
G
G
C
T
T
C
T
A
T
T
A
G
A
44950 |
REPEAT
A
T
C
T
C
A
C
C
T
G
G
G
A
A
G
A
T
G
T
T
A
A
A
A
C
T
A
C
T
A
A
C
T
C
C
C
A
C
C
T
C
C
A
A
A
G
A
T
A
C
45000
T
G
A
C
T
T
A
A
T
T
G
C
T
C
A
A
G
G
G
T
G
T
A
G
G
G
A
A
G
G
G
G
C
A
A
G
C
A
T
A
T
T
T
T
T
T
T
A
A
A
45050
T
G
C
A
T
A
T
G
T
G
A
T
T
A
A
A
T
T
T
A
G
A
G
C
C
A
A
C
A
T
T
G
A
G
A
G
T
C
A
C
T
ACTTTACAA
45100 |
var(45071):[A:0.09]
|
var(45084):[C:0.07]
GCATCTATTA CTCTGTAAGA GTCAGAAGAA AACCTTTATC CCAGTATGAA
45150
ACCTTTTCTA AGAAAAAATA TTTGTGCCCT GTTTTTGTAA ATAAGCCTGA
45200
TTTTTAAATC TATTTTGGCT TTACATAAAT ACAAATAGAG TTCTTATTGC
45250
TTTTTCCTTT CATTTATTTC TCACAGTTGT T
T
A
T
T
T
T
G
T
T
T
A
T
A
G
T
A
A
T
T
45300 |
REPEAT
T
A
T
T
T
T
G
T
C
T
A
T
C
A
T
C
T
C
T
C
T
T
C
C
C
C
C
A
A
C
A
G
A
A
T
A
A
G
C
T
C
C
T
T
G
A
A
G
G
C
45350
A
G
G
A
A
T
T
T
T
T
A
A
T
T
A
T
T
T
T
G
T
T
C
A
T
C
G
C
T
A
T
A
T
C
C
C
C
A
G
T
G
T
C
A
A
G
A
G
T
G
45400 |
var(45374):[T:0.12]
T
C
C
G
A
C
A
C
A
T
G
C
T
A
G
G
T
G
C
T
C
A
A
A
A
A
A
T
T
C
T
T
G
T
C
A
A
A
AT TTTTGACACT
45450
AATTTTGATG CACA
G
A
T
C
A
T
G
A
T
T
C
C
T
A
G
T
C
C
C
A
G
G
A
A
G
C
T
T
G
T
G
A
T
C
T
A
45500 |
NOT SCANNED
T
T
A
A
A
A
A
C
A
C
A
C
A
G
A
C
A
T
G
A
A
A
A
T
A
C
A
A
T
C
C
A
G
T
A
T
T
T
C
T
A
T
G
G
A
G
G
T
T
A
45550
A
T
G
A
A
T
T
G
T
A
A
T
A
T
A
T
T
T
A
C
A
G
T
A
G
G
T
T
A
A
A
C
A
A
T
G
T
T
G
A
G
T
T
T
T
A
A
A
G
A
45600
A
A
G
C
A
T
A
T
G
G
C
A
A
A
T
G
T
A
A
G
A
G
A
C
A
G
A
G
T
C
T
T
T
G
C
C
A
C
T
T
A
T
T
T
C
C
T
T
T
T
45650
A
T
T
C
T
C
C
T
G
A
T
A
A
G
C
A
A
C
A
T
G
G
T
A
T
A
A
T
A
G
A
A
A
A
A
C
T
A
A
G
G
A
G
C
C
A
A
T
A
G
45700
T
T
C
C
A
A
A
A
C
A
G
A
T
G
T
A
G
A
A
T
T
A
G
A
T
C
A
G
T
T
A
C
C
A
G
A
G
G
A
C
A
T
T
G
A
G
A
A
A
G
45750 |
REPEAT
T
T
T
G
T
T
T
A
A
C
C
C
T
T
T
G
G
A
T
G
T
C
A
G
G
C
T
T
C
T
C
A
T
C
T
C
C
A
A
C
A
T
C
A
T
A
C
T
G
T
45800
T
G
G
A
A
G
A
G
T
T
G
A
C
C
A
C
G
C
A
G
C
T
T
T
T
A
C
T
A
T
T
C
A
G
T
G
T
T
T
C
C
A
T
G
T
T
A
C
T
A
45850
C
A
T
C
C
T
A
T
C
G
T
T
A
T
A
G
G
A
G
C
C
A
C
A
A
T
G
T
G
G
C
A
A
G
G
C
A
T
T
A
A
A
T
G
G
C
A
T
G
T
45900
T
T
T
T
C
C
T
T
T
T
C
A
T
C
G
T
T
C
T
G
T
A
A
A
T
C
T
T
A
C
A
T
T
T
T
T
A
T
C
C
A
G
A
T
C
C
A
T
T
T
45950
A
C
A
C
C
T
G
T
C
T
T
G
T
C
A
T
T
T
T
C
C
A
T
G
C
T
G
T
T
A
C
A
G
G
G
A
C
A
C
G
T
G
C
T
T
T
T
T
T
A
46000
T
C
C
T
G
T
T
A
T
C
A
A
A
C
T
C
A
C
T
T
T
T
A
A
A
A
T
C
C
C
C
C
T
T
T
G
A
G
G
T
T
A
T
T
A
G
C
T
G
C
46050
T
T
T
G
T
C
T
A
A
C
C
C
A
A
T
G
T
C
A
T
A
T
G
C
T
T
C
T
C
C
A
C
T
G
T
G
C
A
T
G
C
T
C
T
C
C
A
G
A
T
46100
A
T
G
C
A
T
A
T
A
A
G
T
C
A
C
T
G
A
T
A
A
T
C
A
T
G
A
A
T
G
A
G
T
C
T
G
C
A
T
T
T
G
G
A
A
T
T
G
A
T
46150
T
C
A
G
T
G
T
G
A
A
G
T
A
T
T
T
A
A
A
G
A
T
T
C
T
T
C
A
C
A
A
G
G
G
G
T
T
C
A
C TCAGTCTGGC
46200
ATTAAAAGAA GCTCAGTATC TAAATCCTAG GAGATTGCAA ACT
T
GCTCAG
46250 |
var(46244):[C:0.01]
ATGCTTTGGA AACCTAAACC CATGTAAAAT ACTTAGATAT AAAGTCATTG
46300
AGAAGATGAA CTTCTCATAT TGTATTTGTT CGGCAAGCAT TTATTGACAA
46350
CCCGTTGCTC TGTGCAGAGC ACTTTAG
T
GG AATACGAAAG TTAGTCAAGG
46400 |
var(46378):[C:0.03]
AGTCAAAGAC CCAATCCCAA GCTCTAAGTG GCTCCTAGTT TCTTGGAGAA
46450
AGGAGCTGGA AAGGCTCAGA GGATTAACAT GGAGCACACT TGGATCTCTT
46500
TCACCCTAGA TGGCCTCACA GAAAGGACAC CCTGCCTCTG AATAGCTTCC
46550
AACCACCTTG AGACAATTTT CTCTCATTCT AATGCCATTG CCAGGATATT
46600
ACAGTAATCA GATCATTTGA CGTTACCTGC ATCTTAGTGT CCGCAATCTT
46650
AATATACCAT ATAGATCCAA GTGTCAGGAA TCTGCAGCTG CACAGTTTCA
46700
CATATTATCT TGTGGTGCTA AGTCTTTATG AACAAATAGC ATTGACCTCT
46750
GTGATGGTGC C
G
TCTAAGCA CTTCTTTTTG TCAGCAAATA TACTATCTTA
46800 |
var(46762):[A:0.06]
TAGAGAACTC ACAGGTTGTA ATAGGAAATT ATTCTTCCTT ACATAATGTA
46850
AAAAACACTG GTTATGCCTA GGGTTAATGT AGTCTGCTAA TTTGTAACAG
46900
CAGAGCTTTG TGAGGTATTC ACAGCAGGCC TCCGTGCTAA AGTCCTGGTG
46950
CTGCTGTTCT GATTGATCAA TGTTC
T
T
G
T
G
C
G
A
T
G
T
T
T
G
T
T
A
A
A
T
A
T
T
T
T
47000 |
NOT SCANNED
G
C
C
T
A
T
C
A
C
C
C
C
C
C
T
C
C
T
G
C
T
T
A
T
A
C
C
T
A
T
A
C
G
T
A
A
A
C
C
A
T
G
A
A
A
A
A
G
T
A
47050
A
T
T
T
C
T
T
A
C
T
C
A
T
T
G
C
A
A
G
T
T
C
C
C
C
C
T
C
A
G
G
G
C
C
T
T
T
G
G
C
C
C
T
T
A
C
T
C
T
T
47100
A
C
T
C
T
T
T
T
C
C
C
T
G
T
C
T
A
G
A
A
C
A
T
T
T
C
T
T
T
C
T
T
A
G
C
T
A
T
T
A
T
G
C
T
T
T
G
C
T
G
47150
C
T
C
C
A
A
A
T
G
C
T
A
C
C
T
C
T
T
T
T
T
T
T
C
T
C
T
T
T
C
T
G
T
A
T
G
T
A
T
G
T
G
T
G
T
G
T
G
T
G
47200
T
G
T
A
T
A
T
A
A
T
A
T
A
T
A
T
C
A
T
A
T
A
T
T
A
T
A
A
T
A
A
T
A
T
A
T
A
T
C
A
T
A
T
A
T
T
A
T
A
A
47250
T
A
A
T
A
T
A
T
A
T
C
A
T
A
T
A
T
T
A
T
A
A
T
A
A
T
A
T
A
T
A
T
C
A
T
A
T
A
T
T
A
T
T
A
T
A
A
T
A
T
47300
A
T
A
T
C
A
T
A
T
A
T
T
A
T
T
A
T
A
A
T
A
T
A
T
A
T
C
A
T
A
T
A
T
T
A
T
G
A
T
A
T
A
T
C
A
T
A
T
A
T
47350
T
A
T
A
A
T
A
A
T
A
T
A
T
A
T
C
A
T
A
T
A
T
T
A
T
G
A
T
A
G
A
T
C
A
T
A
T
A
T
T
A
T
A
T
G
A
T
A
T
A
47400
T
A
T
T
A
T
T
A
T
A
A
T
A
T
A
T
G
A
T
A
T
A
T
A
T
C
A
T
A
T
A
A
T
A
T
G
A
T
A
T
A
T
A
T
T
A
T
T
A
T
47450
A
T
A
T
T
A
A
T
A
T
A
A
T
A
T
A
T
T
A
C
T
A
T
A
T
A
A
T
A
T
A
A
T
T
A
T
A
A
T
T
A
T
T
A
T
A
T
A
T
T
47500
A
A
C
A
A
T
A
T
A
C
A
A
T
A
T
A
A
T
T
A
T
G
T
G
A
T
A
A
T
A
T
A
T
A
A
T
A
T
A
T
T
A
T
A
T
G
A
T
T
A
47550
T
A
T
T
A
T
G
T
G
A
T
T
A
T
T
A
T
A
T
T
A
T
T
A
T
A
T
T
A
T
A
T
A
T
T
A
T
G
A
T
T
A
T
T
A
T
A
A
T
A
47600
T
A
T
T
A
A
T
A
T
A
G
A
A
T
A
T
A
T
A
A
T
A
A
A
T
A
T
A
T
T
C
T
A
T
A
T
T
A
T
A
T
A
T
A
A
T
A
T
A
T
47650
A
T
A
A
T
A
T
A
T
T
A
T
A
T
A
T
T
A
T
T
A
T
A
T
G
A
T
A
A
A
T
A
A
T
A
T
A
G
A
T
T
G
T
C
A
T
A
T
T
A
47700
T
A
A
T
C
T
A
T
A
A
T
A
T
A
T
T
A
T
A
G
A
T
T
A
T
T
A
T
A
T
T
A
T
A
A
T
A
T
A
T
A
A
T
A
T
A
G
T
T
T
47750
A
T
G
A
T
T
A
T
T
C
T
A
A
T
A
T
A
A
T
A
T
G
T
T
G
T
C
A
T
G
T
A
C
A
C
A
T
G
G
C
C
T
T
G
T
G
T
C
A
T
47800
T
A
G
T
T
G
T
A
T
T
T
T
C
A
C
T
G
C
T
C
C
T
G
T
C
T
C
A
C
T
C
C
C
T
T
G
A
C
T
A
G
A
T
T
A
T
A
A
A
C
47850
T
C
T
C
T
G
A
G
G
C
T
A
A
T
A
A
A
A
A
T
A
A
T
T
T
T
T
T
T
G
T
A
T
G
T
G
T
G
T
T
T
A
T
G
T
T
T
T
A
T
47900
A
T
A
T
A
C
A
C
A
C
A
T
A
T
G
T
A
T
A
C
T
G
T
A
T
T
C
T
C
C
C
G
A
T
G
T
A
T
A
A
A
T
A
T
A
A
A
A
T
C
47950
T
A
T
T
A
T
T
A
T
C
T
G
C
C
A
T
C
C
T
T
T
C
A
C
C
A
C
C
A
A
A
C
T
A
A
A
A
T
G
C
A
A
G
T
T
C
C
T
A
G
48000
A
A
A
A
C
A
A
A
T
T
A
T
A
G
T
A
C
A
T
A
G
T
A
G
G
C
A
C
T
C
A
A
T
A
A
A
T
A
T
G
T
G
T
A
A
A
T
A
A
A
48050 |
REPEAT
G
A
T
A
T
A
T
A
T
A
T
A
A
T
A
T
T
T
G
T
A
A
A
T
A
C
G
C
A
C
A
T
A
A
A
T
A
T
G
C
A
T
G
T
T
T
A
T
A
T
48100
G
T
A
T
C
T
G
T
A
A
T
A
T
G
T
A
T
G
T
G
T
A
A
A
A
A
T
G
T
A
T
A
T
A
T
G
T
A
T
A
C
T
T
A
T
G
T
A
T
A
48150
T
G
T
A
T
C
T
G
T
A
A
A
T
A
T
G
A
T
A
T
T
G
G
T
C
T
G
C
A
T
G
T
A
T
G
T
T
C
A
C
A
A
A
T
G
A
A
G
G
G
48200
T
G
T
G
T
C
A
G
G
T
A
T
A
G
A
T
A
T
T
T
T
A
A
T
T
C
A
G
C
T
G
A
G
T
A
T
G
G
A
T
T
A
A
A
G
G
T
G
A
T
48250
C
A
T
T
C
T
GTGT AATAACTGGC AAGCAGTCAG TGATCATGTC AAACCATGCC
48300
TGTTAACTCT AGCATCTCAA CCTTAACTAG TAACTGGGAG ATAATGAATT
48350
TTATACAAAT TGTAGGAATT TTTGAGTAAT ATGTATTTAG TAATTTTGGT
48400
ACCATCCTTA CAATTTCTAC ATTGTGTAGG CTTATTGTAC AGTGTTCTTC
48450
CTTTTTCACT C
C
ATTTGTTC ATGTCTTATC TCTTCCTCAG ATTTGTTTTC
48500 |
var(48462):[T:0.05]
AACAAATCCA TATTTTGTCT CACTTATTTT GAATTCAATT TAGTGCATGA
48550
AAATGATAAT GTTAT
T
GTTA TTAGCAGTAA AGATAAATC
C
T
C
A
C
T
A
T
A
T
A
48600 |
var(48566):[C:0.11]
|
REPEAT
C
C
A
G
G
C
A
C
T
G
T
T
C
T
A