Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000680 00028 5' UTR G 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 000920 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000922 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000924 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001000 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001246 00000 ------------ A 0.58 0.83 0.70 C 0.42 0.17 0.30 0000 --- --- --- --- 001448 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001554 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001678 00000 ------------ T 0.78 0.76 0.77 C 0.22 0.24 0.23 0000 --- --- --- --- 001741 00000 ------------ C 0.76 0.83 0.79 A 0.24 0.17 0.21 0000 --- --- --- --- 001750 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001948 00000 ------------ G 0.70 0.83 0.76 A 0.30 0.17 0.24 0000 --- --- --- --- 002025 00000 ------------ - 0.24 0.24 0.24 + 0.76 0.76 0.76 0000 --- --- --- --- 002048 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002155 00000 ------------ G 1.00 0.80 0.90 A 0.00 0.20 0.10 0000 --- --- --- --- 002364 00000 ------------ - 0.98 0.95 0.97 + 0.02 0.05 0.03 0000 --- --- --- --- 002453 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003035 00000 ------------ T 0.92 0.72 0.82 C 0.08 0.28 0.18 0000 --- --- --- --- 003628 00000 ------------ C 0.71 0.83 0.77 T 0.29 0.17 0.23 0000 --- --- --- --- 004205 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 004246 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004528 00000 ------------ - 0.13 0.00 0.07 + 0.87 1.00 0.93 0000 --- --- --- --- 004644 00000 ------------ T 0.62 0.80 0.72 C 0.38 0.20 0.28 0000 --- --- --- --- 004715 00000 ------------ G 0.76 0.68 0.72 A 0.24 0.32 0.28 0000 --- --- --- --- 004938 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006172 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006207 00000 ------------ C 1.00 0.80 0.90 T 0.00 0.20 0.10 0000 --- --- --- --- 006323 00000 ------------ A 0.74 0.70 0.72 G 0.26 0.30 0.28 0000 --- --- --- --- 006955 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006998 00000 ------------ T 0.76 0.72 0.74 A 0.24 0.28 0.26 0000 --- --- --- --- 007238 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 007382 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 007447 00000 ------------ C 0.80 0.80 0.80 T 0.20 0.20 0.20 0000 --- --- --- --- 008018 00000 ------------ A 0.85 0.70 0.77 G 0.15 0.30 0.23 0000 --- --- --- --- 008054 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 008831 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 009358 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009359 00000 ------------ A 0.65 0.79 0.72 G 0.35 0.21 0.28 0000 --- --- --- --- 009513 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 009569 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 009572 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 009720 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009762 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 009829 00000 ------------ T 0.64 0.61 0.62 A 0.36 0.39 0.38 0000 --- --- --- --- 009984 00000 ------------ C 0.90 0.67 0.79 T 0.10 0.33 0.21 0000 --- --- --- --- 010132 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 010481 00000 ------------ A 0.79 0.83 0.81 G 0.21 0.17 0.19 0000 --- --- --- --- 010514 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010621 00000 ------------ A 0.73 0.61 0.67 G 0.27 0.39 0.33 0000 --- --- --- --- 010704 00000 ------------ T 0.71 0.93 0.82 A 0.29 0.07 0.18 0000 --- --- --- --- 010954 00000 ------------ A 0.73 0.61 0.67 C 0.27 0.39 0.33 0000 --- --- --- --- 011546 00000 ------------ T 0.78 0.83 0.80 C 0.22 0.17 0.20 0000 --- --- --- --- 011557 00000 ------------ T 0.78 0.83 0.80 A 0.22 0.17 0.20 0000 --- --- --- --- 011585 00000 ------------ C 0.91 0.61 0.76 A 0.09 0.39 0.24 0000 --- --- --- --- 011648 00000 ------------ G 0.78 0.83 0.80 T 0.22 0.17 0.20 0000 --- --- --- --- 011745 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011750 00000 ------------ C 0.94 0.67 0.81 G 0.06 0.33 0.19 0000 --- --- --- --- 012267 00000 ------------ A 0.96 0.70 0.83 G 0.04 0.30 0.17 0000 --- --- --- --- 012374 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012427 00000 ------------ G 0.58 0.50 0.54 A 0.42 0.50 0.46 0000 --- --- --- --- 012670 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 012963 00000 ------------ T 0.75 0.80 0.78 G 0.25 0.20 0.22 0000 --- --- --- --- 013069 00000 ------------ C 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 013309 00000 ------------ C 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 013311 00000 ------------ C 1.00 0.80 0.90 G 0.00 0.20 0.10 0000 --- --- --- --- 013526 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013693 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013909 00000 ------------ C 0.79 0.86 0.82 A 0.21 0.14 0.18 0000 --- --- --- --- 014015 00000 ------------ T 0.52 0.54 0.53 A 0.48 0.46 0.47 0000 --- --- --- --- 014312 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 014587 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015096 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015143 00000 ------------ A 0.54 0.50 0.52 G 0.46 0.50 0.48 0000 --- --- --- --- 015513 00000 ------------ - 0.06 0.30 0.17 + 0.94 0.70 0.83 0000 --- --- --- --- 015888 00000 ------------ T 0.75 0.80 0.78 C 0.25 0.20 0.22 0000 --- --- --- --- 016091 00000 ------------ G 0.80 0.85 0.82 C 0.20 0.15 0.18 0000 --- --- --- --- 016431 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016531 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017015 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017131 00000 ------------ G 0.80 0.61 0.71 A 0.20 0.39 0.29 0000 --- --- --- --- 017484 00000 ------------ G 0.97 0.88 0.93 T 0.03 0.12 0.07 0000 --- --- --- --- 017599 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 017661 00000 ------------ A 0.82 0.81 0.81 T 0.18 0.19 0.19 0000 --- --- --- --- 017811 00000 ------------ - 0.57 0.50 0.53 + 0.43 0.50 0.47 0000 --- --- --- --- 017976 00000 ------------ G 1.00 0.92 0.97 A 0.00 0.08 0.03 0000 --- --- --- --- 018031 00000 ------------ - 0.07 0.32 0.19 + 0.93 0.68 0.81 0000 --- --- --- --- 018058 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018264 00000 ------------ G 0.75 0.80 0.78 A 0.25 0.20 0.22 0000 --- --- --- --- 018563 00000 ------------ - 0.02 0.19 0.11 + 0.98 0.81 0.89 0000 --- --- --- --- 019665 00000 ------------ G 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 019714 00000 ------------ G 0.77 0.80 0.79 C 0.23 0.20 0.21 0000 --- --- --- --- 019838 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 019905 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 019926 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 020033 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020158 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020203 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020541 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 020789 00000 ------------ G 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 020843 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 021122 00000 ------------ A 0.94 0.70 0.82 C 0.06 0.30 0.18 0000 --- --- --- --- 021168 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 021176 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 021449 00000 ------------ G 0.78 0.83 0.80 A 0.22 0.17 0.20 0000 --- --- --- --- 021820 00000 ------------ A 0.96 0.67 0.82 G 0.04 0.33 0.18 0000 --- --- --- --- 022443 00000 ------------ C 0.76 0.80 0.78 T 0.24 0.20 0.22 0000 --- --- --- --- 022505 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022692 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022839 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023430 00000 ------------ C 0.75 0.82 0.78 A 0.25 0.18 0.22 0000 --- --- --- --- 023701 00000 ------------ G 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 023837 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 023956 00475 NON-SYN C 0.76 0.80 0.78 G 0.24 0.20 0.22 0148 GCA GGA ALA(A) GLY(G) 024095 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 024239 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 024499 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024561 00000 ------------ G 0.78 0.80 0.79 A 0.22 0.20 0.21 0000 --- --- --- --- 024992 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 025024 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025147 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 025424 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 025439 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025487 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 025527 00000 ------------ G 0.77 0.82 0.80 A 0.23 0.18 0.20 0000 --- --- --- --- 025578 00546 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0172 GTT CTT VAL(V) LEU(L) 026331 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 026420 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026523 00000 ------------ T 0.94 0.70 0.82 C 0.06 0.30 0.18 0000 --- --- --- --- 026778 00000 ------------ - 0.24 0.20 0.22 + 0.76 0.80 0.78 0000 --- --- --- --- 027254 00000 ------------ A 0.76 0.80 0.78 C 0.24 0.20 0.22 0000 --- --- --- --- 027311 00000 ------------ A 0.76 0.80 0.78 G 0.24 0.20 0.22 0000 --- --- --- --- 027897 00000 ------------ - 0.77 0.80 0.79 + 0.23 0.20 0.21 0000 --- --- --- --- 027982 00000 ------------ A 0.52 0.54 0.53 G 0.48 0.46 0.47 0000 --- --- --- --- 028077 00000 ------------ C 0.52 0.54 0.53 T 0.48 0.46 0.47 0000 --- --- --- --- 028098 00000 ------------ A 0.57 0.48 0.52 T 0.43 0.52 0.48 0000 --- --- --- --- 028218 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 028739 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 028841 00000 ------------ T 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 028997 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029024 00000 ------------ A 0.73 0.93 0.83 C 0.27 0.07 0.17 0000 --- --- --- --- 029208 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 029392 00000 ------------ T 0.75 0.80 0.78 A 0.25 0.20 0.22 0000 --- --- --- --- 029405 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029807 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 029912 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030153 00000 ------------ T 0.95 0.67 0.81 A 0.05 0.33 0.19 0000 --- --- --- --- 030173 EXON9 -1 SPLICE G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030199 00964 NON-SYN C 0.76 0.83 0.80 G 0.24 0.17 0.20 0311 TCT TGT SER(S) CYS(C) 030718 01483 3' UTR - 0.73 0.83 0.78 + 0.27 0.17 0.22 0000 --- --- --- --- 030931 00000 ------------ G 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 030941 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 031136 00000 ------------ G 0.77 0.82 0.79 A 0.23 0.18 0.21 0000 --- --- --- --- 031174 00000 ------------ T 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 031549 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 031561 00000 ------------ G 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 031719 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031873 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 032009 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 032098 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032237 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032528 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 032536 00000 ------------ - 0.62 0.74 0.68 + 0.38 0.26 0.32 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000920: C 002025: G 002364: TAAATAAA 004205: A 004246: GGAAAGGCTCTTCAGAGGAAGTT 004528: A 007238: CC 009762: T 015513: TG 017811: GTAAGCATTGT 018031: CTTAA 018563: G 026778: AACA 027897: GT 030718: ATA 032536: TAT