Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000276 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 001000 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001783 00000 ------------ C 0.83 0.87 0.85 G 0.17 0.13 0.15 0000 --- --- --- --- 001819 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002292 00000 ------------ C 0.83 0.37 0.61 T 0.17 0.63 0.39 0000 --- --- --- --- 002295 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002754 00000 ------------ T 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 002806 00000 ------------ T 1.00 0.91 0.95 G 0.00 0.09 0.05 0000 --- --- --- --- 003302 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003369 00000 ------------ G 0.92 0.86 0.89 A 0.08 0.14 0.11 0000 --- --- --- --- 003390 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 003569 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003868 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003908 00000 ------------ - 0.85 0.37 0.61 + 0.15 0.63 0.39 0000 --- --- --- --- 004065 00000 ------------ G 0.85 0.87 0.86 T 0.15 0.13 0.14 0000 --- --- --- --- 004121 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004396 00000 ------------ A 0.83 0.37 0.61 G 0.17 0.63 0.39 0000 --- --- --- --- 004668 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 005363 00000 ------------ A 0.65 0.76 0.70 G 0.35 0.24 0.30 0000 --- --- --- --- 005436 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005810 00000 ------------ G 0.88 0.86 0.87 A 0.12 0.14 0.13 0000 --- --- --- --- 005886 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005898 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006295 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006315 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007527 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007661 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 007722 00000 ------------ C 0.85 0.87 0.86 A 0.15 0.13 0.14 0000 --- --- --- --- 007737 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008061 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008065 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008261 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 008496 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008509 00000 ------------ T 0.96 0.96 0.96 C 0.04 0.04 0.04 0000 --- --- --- --- 008595 00000 ------------ A 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 008680 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008760 00000 ------------ T 0.90 0.89 0.89 A 0.10 0.11 0.11 0000 --- --- --- --- 008810 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009022 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009093 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009191 00000 ------------ T 0.90 0.87 0.88 C 0.10 0.13 0.12 0000 --- --- --- --- 009667 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009685 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009862 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010128 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010242 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010782 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 010985 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011061 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011186 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011255 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011385 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011686 00000 ------------ T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 011692 00000 ------------ A 0.81 0.35 0.59 G 0.19 0.65 0.41 0000 --- --- --- --- 011888 00000 ------------ T 0.74 0.93 0.85 A 0.26 0.07 0.15 0000 --- --- --- --- 011928 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011942 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 012652 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012737 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012801 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012845 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012862 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013122 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 013354 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014095 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014341 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014711 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015057 00000 ------------ G 0.79 0.93 0.86 T 0.21 0.07 0.14 0000 --- --- --- --- 015237 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015255 00000 ------------ C 0.79 0.50 0.65 T 0.21 0.50 0.35 0000 --- --- --- --- 015340 00000 ------------ G 0.90 0.73 0.82 A 0.10 0.27 0.18 0000 --- --- --- --- 015573 00000 ------------ G 0.85 0.74 0.80 A 0.15 0.26 0.20 0000 --- --- --- --- 015718 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015854 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016022 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016373 00000 ------------ C 0.48 0.68 0.58 T 0.52 0.32 0.42 0000 --- --- --- --- 016486 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017052 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017079 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 017171 00000 ------------ A 0.52 0.67 0.60 G 0.48 0.33 0.40 0000 --- --- --- --- 017311 00000 ------------ T 0.92 0.93 0.93 A 0.08 0.07 0.07 0000 --- --- --- --- 017397 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017474 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017683 00000 ------------ G 0.98 0.87 0.93 A 0.02 0.13 0.07 0000 --- --- --- --- 018532 00000 ------------ C 0.69 0.93 0.81 T 0.31 0.07 0.19 0000 --- --- --- --- 018810 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019445 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019506 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019779 00000 ------------ A 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 019816 00000 ------------ G 0.50 0.67 0.59 A 0.50 0.33 0.41 0000 --- --- --- --- 020293 00348 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0045 CTG CCG LEU(L) PRO(P) 020467 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020880 00489 NON-SYN G 0.73 0.80 0.77 A 0.27 0.20 0.23 0092 CGC CAC ARG(R) HIS(H) 021124 00000 ------------ - 0.74 0.52 0.63 + 0.26 0.48 0.37 0000 --- --- --- --- 021349 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021539 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 021626 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 021721 00000 ------------ T 1.00 0.82 0.91 C 0.00 0.18 0.09 0000 --- --- --- --- 021728 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021900 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 022537 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023016 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023024 00000 ------------ G 0.90 0.75 0.83 T 0.10 0.25 0.17 0000 --- --- --- --- 023094 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023131 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023141 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023203 00000 ------------ A 0.74 0.80 0.77 C 0.26 0.20 0.23 0000 --- --- --- --- 023478 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023577 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023681 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023700 00000 ------------ C 0.93 0.74 0.83 T 0.07 0.26 0.17 0000 --- --- --- --- 023864 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024262 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 024346 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 025340 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 025780 00787 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0191 AAG AAC LYS(K) ASN(N) 025800 00807 NON-SYN T 0.69 0.93 0.80 C 0.31 0.07 0.20 0198 ATA ACA ILE(I) THR(T) 026293 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 026617 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026946 00000 ------------ G 0.69 0.93 0.81 A 0.31 0.07 0.19 0000 --- --- --- --- 026985 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027167 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027461 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027868 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 028320 00000 ------------ A 0.77 0.57 0.67 T 0.23 0.43 0.33 0000 --- --- --- --- 028914 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028929 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029084 00000 ------------ G 0.52 0.70 0.61 C 0.48 0.30 0.39 0000 --- --- --- --- 029789 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029956 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030078 00000 ------------ T 0.66 0.74 0.70 G 0.34 0.26 0.30 0000 --- --- --- --- 030293 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030368 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 030610 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030986 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031021 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031164 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 031277 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031331 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031854 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032160 01350 NON-SYN C 0.67 0.74 0.71 T 0.33 0.26 0.29 0379 GCA GTA ALA(A) VAL(V) 032287 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032647 00000 ------------ - 0.00 0.37 0.18 + 1.00 0.63 0.82 0000 --- --- --- --- 033634 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033711 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 033831 00000 ------------ A 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 034281 00000 ------------ A 0.58 0.74 0.66 G 0.42 0.26 0.34 0000 --- --- --- --- 034367 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 034756 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003908: ACT 007661: CCAAG 008061: CTCT 013122: ATAA 021124: T 026293: T 030368: AAGAG 032647: GATT 034367: CACACTGAG