************************************************************* **** **** **** Output from PHASE v2.0 **** **** Code by M Stephens, with contributions from N Li **** **** **** ************************************************************* BEGIN COMMAND_LINE /usr/local/genome/lib/phase/PHASE2 -d1 pdipx.phase.inp pdipx.phase.out END COMMAND_LINE BEGIN OUTFILE_LIST pdipx.phase.out_freqs : haplotype frequency estimates pdipx.phase.out_pairs : most likely haplotype pairs for each individual pdipx.phase.out_recom : estimates of recombination parameters pdipx.phase.out_monitor : file for monitoring convergence END OUTFILE_LIST BEGIN INPUT_SUMMARY Number of Individuals: 47 Number of Loci: 25 Positions of loci: 105 601 1458 1634 1638 1646 1659 1672 1780 1926 3185 3222 3256 3374 3532 4015 4261 5038 5302 5559 5660 6321 6334 6514 6980 END INPUT_SUMMARY List of haplotypes found in best reconstruction, with counts. (See file pdipx.phase.out_freqs for haplotype population frequency estimates) BEGIN LIST_SUMMARY 1 GCCTCI 4 TTCCGICGCGGACGTCTD 4.000000 2 GCCTCI 4 TTCCCDCGCAGGCGGCCI 1.000000 3 GCCTCI 4 TTCGGICGCGGACGTCTD 1.000000 4 GCCTCD 3 TTCCGICGCGGACGTCTI 1.000000 5 GCCTCD 3 TTCCGICGCGGACGTCTD 9.000000 6 GCCTCD 3 TTCCGICGCGAGCAGCCI 1.000000 7 GCCTCD 3 TTCCGDCGCGGACGTCTD 1.000000 8 GCCTCD 3 TTCCGDCGCAGGCGTCTI 1.000000 9 GCCTCD 3 TTCCGDTGCGGGTGTCTI 1.000000 10 GCCTCD 3 TTCCCICGCGAGCATCCI 1.000000 11 GCCTCD 3 TTCCCICGCGAGCAGCCI 1.000000 12 GCCTCD 3 TTCCCICACGAGCAGCCI 4.000000 13 GCCTCD 3 TTCCCICACGAGCAGCCD 1.000000 14 GCCTCD 3 TTCCCICATGAGCAGCCI 3.000000 15 GCCTCD 3 TTCCCICATGAGCAGCCD 2.000000 16 GCCTCD 3 TTCCCITGCGGGTGTTTI 4.000000 17 GCCTCD 3 TTTCGICGCGAGCAGCCI 1.000000 18 GCCTCD 3 TCCCCITGCGGGTGTTTI 4.000000 19 GCCTCD 3 ATCCGDCGCGAGCAGCCI 1.000000 20 GCCTCD 4 TTCCCICATGAGCAGCCI 1.000000 21 GCCTGI 4 TTCCGICGCGGACGTCTD 1.000000 22 GCCTGD 3 TTCCGICGCGGACGTCTD 1.000000 23 GCCTGD 4 TTCCGICGCGGGCGTCTD 1.000000 24 GCCTGD 4 TTCCGICGCGGACGTCTD 4.000000 25 GCCTGD 4 TTCCGICATGAGCAGCCI 2.000000 26 GCCTGD 4 TTCCCICATGAGCAGCCI 1.000000 27 GCCTGD 4 TTCGGICGCGGACGTCTD 8.000000 28 GCCCCD 4 TTCCGICGCGGACGTCTD 4.000000 29 GCCCCD 4 TTCCGICGCAGGCGTCTI 3.000000 30 GCCCCD 4 TTCCCICATGAGCAGCCI 7.000000 31 GCCCGI 2 ATCCGICGCAGGCGTCTI 1.000000 32 GCCCGI 2 ATCCCITGCAGGTGTCTI 2.000000 33 GCCCGI 2 ATCCCDCGCAGGCGGCCI 1.000000 34 GCCCGD 4 TTCCGICGCGGACGTCTD 2.000000 35 GCCCGD 4 TTCCGICGCGAGCAGCCI 2.000000 36 GCTCCD 3 TTCCCICATGAGCAGCCI 2.000000 37 GTCCCD 3 TTCCGICGCGAGCAGCCI 1.000000 38 GTTTGI -9 ATTCGICGCGAGCAGCCI 2.000000 39 GTTTGI -9 ATTCCDCATGAGCGTCTI 1.000000 40 GTTTGD 4 TTCCCICGCAGGCGGCCI 1.000000 41 ACCTCD 3 TTCCGICGCGGACGTCTD 2.000000 42 ACCTCD 3 TTCCCDCATGAGCGTCTI 1.000000 43 ATTTGI -9 ATTCGICGCGAGCAGCCI 1.000000 END LIST_SUMMARY Summary of best reconstruction (numbers refer to the list of haplotypes given above) BEGIN BESTPAIRS_SUMMARY DY01: (1,21) DY02: (6,39) DY03: (7,13) DY04: (2,30) DY05: (11,30) DY06: (14,15) DY07: (30,30) DY08: (31,32) DY09: (4,5) DY10: (9,41) DY11: (30,36) DY12: (32,33) DY13: (14,41) DY14: (29,19) DY15: (8,10) DY16: (30,40) DY17: (5,38) DY18: (37,36) DY19: (17,35) DY20: (15,43) DY21: (29,30) DY22: (5,38) DY23: (29,20) DY24: (35,42) E101: (1,12) E102: (1,27) E103: (22,24) E104: (5,27) E105: (27,34) E106: (5,18) E107: (1,27) E108: (24,27) E109: (16,24) E110: (5,5) E111: (16,26) E112: (12,28) E113: (5,25) E114: (12,18) E115: (27,28) E116: (12,16) E117: (5,18) E118: (3,18) E119: (24,27) E120: (28,28) E121: (14,25) E122: (23,27) E123: (16,34) END BESTPAIRS_SUMMARY Haplotype estimates for each individual, with uncertain phases enclosed in () and uncertain genotypes enclosed in []: BEGIN BESTPAIRS1 0 DY01 G C C T C I 4 T T C C G I C G C G G A C G T C T D G C C T G I 4 T T C C G I C G C G G [A] C G T C T D 0 DY02 G C C [T] [C] D [3] T T C C G I C G C G A G C A G C C I G T T T [G] [I] [-9] [A] T [T] C C D C A T G A G C G T C T I 0 DY03 G C C T C D 3 T T C C G (D) C G C G G A C G T C T D G C C T C D 3 T T C C C (I) C A C G A G C A G C C D 0 DY04 G C C (T) C I [4] T T C C C D C G C A G G C G G C C I G C C (C) C D [4] T T C C C I C A T G A G C A G C C I 0 DY05 G C C T C D [3] T T C C C I C G C G A G C A G C C I G C C [C] C D [4] T T C C C I C A T G A G C A G C C I 0 DY06 G C C T C D 3 T T C C C I C A T G A G C A G C C I G C C T C D 3 T T C C C I C A T G A G C A G C C D 0 DY07 G C C C C D 4 T T C C C I C A T G A G C A G C C I G C C C C D 4 T T C C C I C A T G A G C A G C C I 0 DY08 G C C C G I 2 A T C C G I C G C A G G C G T C T I G C C C G I 2 A T C C C I T G C A G G T G T C T I 0 DY09 G C C T C D 3 T T C C G I C G C G G A C G T C T I G C C T C D 3 T T C C G I C G C G G A C G T C T D 0 DY10 (G) C C T C D 3 T T C C G D T G C G G G T G T C T I (A) C C T C D 3 T T C C G I C G C G G A C G T C T D 0 DY11 G C (C) C C D 4 T T C C C I C A T G A G C A G C C I G C (T) C C D 3 T T C C C I C A T G A G C A G C C I 0 DY12 G C C C G I 2 A T C C C I T G C A G G T G T C T I G C C C G I 2 A T C C C D C G C A G G C G G C C I 0 DY13 (G) C C T C D 3 T T C C C I C A T G A G C A G C C I (A) C C T C D 3 T T C C G I C G C G G A C G T C T D 0 DY14 G C C (C) C D (4) (T) T C C G (I) C G C A G G C G T C T I G C C (T) C D (3) (A) T C C G (D) C G C G A G C A [G] C C I 0 DY15 G C C T C D 3 T T C C (G) (D) C G C A G G C G T C T I G C C T C D 3 T T C C (C) (I) C G C G A G C A T C C I 0 DY16 G (C) (C) (C) (C) D 4 T T C C C I C A T G A G C A G C C I G (T) (T) (T) (G) D 4 T T C C C I C G C A G G C G G C C I 0 DY17 G C C T C D 3 T T C C G I C G C G G A C G T C T D G T T T G I [-9] A T T C G I C G C G A G C A G C C I 0 DY18 G (T) (C) C C D 3 T T C C G I C G C G A G C A G C C I G (C) (T) C C D 3 T T C C C I C A T G A G C A G C C I 0 DY19 G C C (T) C D 3 T T (T) C G I C G C G A G C A G C C I G C C (C) G D 4 T T (C) C G I C G C G A G C A G C C I 0 DY20 G C C T C D 3 T T C C C I C A T G A G C A G C C (D) A T T T G I [-9] A T T C G I C G C G A G C A G C C (I) 0 DY21 G C C C C D 4 T T C C G I C G C A G G C G T C T I G C C C C D 4 T T C C C I C A T G A G C A G C C I 0 DY22 G C C T [C] D [3] T T C C G I C G C G G A C G T C T D G T T T G I [-9] A T T C G I C G C G A G C A G C C I 0 DY23 G C C [C] [C] [D] [4] [T] T C C G I C G C A G G C G T C T I G C C [T] C D [4] T T C C C I C A T G A G C A G C C I 0 DY24 (G) C C (C) (G) D (4) T T C C G I C G C G A G C A G C C I (A) C C (T) (C) D (3) T T C C C D C A T G A G C G T C T I 0 E101 G C C T C (I) [4] T T C C G I C G C G G A C G T C T D G C C T C (D) [3] T T C C C I C A C G A G C A G C C I 0 E102 G C C T C I [4] T T C (C) G I C G C G G A C G T C T D G C C T G D 4 T T C (G) G I C G C G G A C G T C T D 0 E103 G C C T G D 3 T T C C G I C G C G G A C G T C T D G C C T G D 4 T T C C G I C G C G G A C G T C T D 0 E104 G C C T C D 3 T T C (C) G I C G C G G A C G T C T D G C C T G D 4 T T C (G) G I C G C G G A C G T C T D 0 E105 G C C (T) G D 4 T T C G G I C G C G G A C G T C T D G C C (C) G D 4 T T C C G I C G C G G A C G T C T D 0 E106 G C C T C D 3 T T C C G I C G C G G A C G T C T D G C C T C D 3 T C C C C I T G C G G G T G T T T I 0 E107 G C C T C I [4] T T C (C) G I C G C G G A C G T C T D G C C T G D [4] T T C (G) G I C G C G G A C G T C T D 0 E108 G C C T G D 4 T T C C G I C G C G G A C G T C T D G C C T G D 4 T T C G G I C G C G G A C G T C T D 0 E109 G C C T (C) D (3) T T C C C I T G C G G G T G T T T I G C C T (G) D (4) T T C C G I C G C G G A C G T C T D 0 E110 G C C T C D 3 T T C C G I C G C G G A C G T C T D G C C T C D 3 T T C C G I C G C G G A C G T C T D 0 E111 G C C T (C) D (3) T T C C C I T G C G G G T G T T T I G C C T (G) D (4) T T C C C I C A T G A G C A G C C I 0 E112 G C C (T) C D (3) T T C C C I C A C G A G C A G C C I G C C (C) C D (4) T T C C G I C G C G G A C G T C T D 0 E113 G C C T (C) D (3) T T C C G I C G C G G A C G T C T D G C C T (G) D (4) T T C C G I C A T G A G C A G C C I 0 E114 G C C T C D 3 T T C C C I C A C G A G C A G C C I G C C T C D 3 T C C C C I T G C G G G T G T T T I 0 E115 G C C T G D 4 T T C (G) G I C G C G G A C G T C T D G C C C C D 4 T T C (C) G I C G C G G A C G T C T D 0 E116 G C C T C D 3 T T C C C I C A C G A G C A G C C I G C C T C D 3 T T C C C I T G C G G G T G T T T I 0 E117 G C C T C D 3 T T C C G I C G C G G A C G T C T D G C C T C D 3 T C C C C I T G C G G G T G T T T I 0 E118 G C C T C I [4] T T C G G I C G C G G A C G T C T D G C C T C D 3 T C C C C I T G C G G G T G T T T I 0 E119 G C C T G D 4 T T C C G I C G C G G A C G T C T D G C C T G D 4 T T C G G I C G C G G A C G T C T D 0 E120 G C C C C D 4 T T C C G I C G C G G A C G T C T D G C C C C D 4 T T C C G I C G C G G A C G T C T D 0 E121 G C C T C D 3 T T C C (C) I C A T G A G C A G C C I G C C T G D 4 T T C C (G) I C A T G A G C A G C C I 0 E122 G C C T G [D] 4 T T C (C) G I C G C G G G C G T C T D G C C T G D 4 T T C (G) G I C G C G G A C G T C T D 0 E123 G C C (T) (C) D (3) T T C C C I T G C G G G T G T T T I G C C (C) (G) D (4) T T C C G I C G C G G A C G T C T D END BESTPAIRS1 Haplotype estimates for each individual, with uncertain phases enclosed in () and uncertain genotypes enclosed in [] with phase known positions indicated by = BEGIN BESTPAIRS2 0 DY01 ? = = = C = = = ? ? = = = = = = = ? ? = = = = = ? ? = = = G = = = ? ? = = = = = = = ? ? = = = = = ? 0 DY02 ? C C ? ? ? ? ? ? ? = G I = G C = ? = = A ? ? C = ? T T ? ? ? ? ? ? ? = C D = A T = ? = = G ? ? T = 0 DY03 ? = = = = = = = ? ? = G (D) = G = = ? A = G ? ? T = ? = = = = = = = ? ? = C (I) = A = = ? G = A ? ? C = 0 DY04 = = = (T) = I ? ? ? ? = = D = G C A ? = = G = = = = = = = (C) = D ? ? ? ? = = I = A T G ? = = A = = = = 0 DY05 ? = = ? ? ? ? ? ? ? = = = = G C = ? = = = = = = = ? = = ? ? ? ? ? ? ? = = = = A T = ? = = = = = = = 0 DY06 ? = = = = = = = ? ? = = = = = = = ? = = = = = = I ? = = = = = = = ? ? = = = = = = = ? = = = = = = D 0 DY07 ? = = = = = = = = ? = = = = = = = ? = = = = = = = ? = = = = = = = = ? = = = = = = = ? = = = = = = = 0 DY08 ? = = = = = = = ? ? = G = C = = = = = C = = = = = ? = = = = = = = ? ? = C = T = = = = = T = = = = = 0 DY09 = = = = ? = = = = = = = = = = = = = = = = = = = I = = = = ? = = = = = = = = = = = = = = = = = = = D 0 DY10 (G) = = = = = ? = = = = = D T = = = = G T = = = = I (A) = = = = = ? = = = = = I C = = = = A C = = = = D 0 DY11 = = (C) = = = 4 = = = = = = = = = = = = = = = = = = = = (T) = = = 3 = = = = = = = = = = = = = = = = = = 0 DY12 = = = = = = = = ? = = = I T = = = = = T = T = T = = = = = = = = = ? = = = D C = = = = = C = G = C = 0 DY13 (G) = = = = = = = = = = C = = A T = A G = A ? ? C I (A) = = = = = = = = = = G = = G C = G A = G ? ? T D 0 DY14 = = = (C) = = (4) (T) = = = = (I) = = = A G = = G ? ? T = = = = (T) = = (3) (A) = = = = (D) = = = G A = = A ? ? C = 0 DY15 = = = = = = = = = = = (G) (D) = = = A G = = G = = T = = = = = = = = = = = = (C) (I) = = = G A = = A = = C = 0 DY16 = (C) (C) (C) (C) = = = = = = = = = A T G A = = A = = = = = (T) (T) (T) (G) = = = = = = = = = G C A G = = G = = = = 0 DY17 = C C = C D ? ? = C = = = = = = = G A = G ? ? T D = T T = G I ? ? = T = = = = = = = A G = A ? ? C I 0 DY18 = (T) (C) = = = = = = = = G = = G C = = = = = = = = = = (C) (T) = = = = = = = = C = = A T = = = = = = = = = 0 DY19 = = = (T) C = 3 = = (T) = = = = = = = = = = = = = = = = = = (C) G = 4 = = (C) = = = = = = = = = = = = = = = 0 DY20 G C C = C D ? ? ? C = C = = A T = ? = = = = = = (D) A T T = G I ? ? ? T = G = = G C = ? = = = = = = (I) 0 DY21 = = = = = = = = = = = G = = G C A G = = G T = T = = = = = = = = = = = = C = = A T G A = = A G = C = 0 DY22 = C C ? ? ? ? ? = C = = = = = = = G A = G ? ? T D = T T ? ? ? ? ? = T = = = = = = = A G = A ? ? C I 0 DY23 = = = ? ? ? ? ? = = = G = = G C A G = = G T = T = = = = ? ? ? ? ? = = = C = = A T G A = = A G = C = 0 DY24 (G) = = (C) (G) = (4) = = = = G I = G C = = = = A G = C = (A) = = (T) (C) = (3) = = = = C D = A T = = = = G T = T = 0 E101 ? = = = = (I) ? ? = = = G = = G = = G A = G ? ? T D ? = = = = (D) ? ? = = = C = = A = = A G = A ? ? C I 0 E102 = = = = C I ? ? = = (C) = = = = = = = = = = = = = = = = = = G D ? ? = = (G) = = = = = = = = = = = = = = 0 E103 = = = = = = 3 = = = = = = = = = = = = = = = = = = = = = = = = 4 = = = = = = = = = = = = = = = = = = 0 E104 = = = = C = 3 = = = (C) = = = = = = ? = = = = = = = = = = = G = 4 = = = (G) = = = = = = ? = = = = = = = 0 E105 = = = (T) = = = = = = G = = = = = = = = = = = = = = = = = (C) = = = = = = C = = = = = = = = = = = = = = 0 E106 = = = = = = = = T = = G = C = = = = A C = = C = D = = = = = = = = C = = C = T = = = = G T = = T = I 0 E107 = = = = C I ? ? = = (C) = = = = = = = = = = = = = = = = = = G D ? ? = = (G) = = = = = = = = = = = = = = 0 E108 ? = = = = = = = = = C = = = = = = = = = = = = = = ? = = = = = = = = = G = = = = = = = = = = = = = = 0 E109 = = = = (C) = (3) = = = = C = T = = = = G T = = T = I = = = = (G) = (4) = = = = G = C = = = = A C = = C = D 0 E110 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 E111 = = = = (C) = (3) = = = = = = T G C = G = T G T T T = = = = = (G) = (4) = = = = = = C A T = A = C A G C C = 0 E112 = = = (T) = = (3) = = = = C = = A = = A G = A ? ? C I = = = (C) = = (4) = = = = G = = G = = G A = G ? ? T D 0 E113 = = = = (C) = (3) = = = = = = = G C = G ? = G T = T D = = = = (G) = (4) = = = = = = = A T = A ? = A G = C I 0 E114 = = = = = = = = T = = = = C A = = A = C A ? ? C = = = = = = = = = C = = = = T G = = G = T G ? ? T = 0 E115 = = = T G = = = = = (G) = = = = = = = = = = = = = = = = = C C = = = = = (C) = = = = = = = = = = = = = = 0 E116 = = = = = = = = = = = = = C A = = ? = C A ? ? C = = = = = = = = = = = = = = T G = = ? = T G ? ? T = 0 E117 = = = = = = = = T = = G = C = = = = A C = = C = D = = = = = = = = C = = C = T = = = = G T = = T = I 0 E118 ? = ? = = I ? ? T = G G = C = ? = = A C = = C = D ? = ? = = D ? ? C = C C = T = ? = = G T = = T = I 0 E119 ? = = = = = = = = = C = = = = = = = = = = = = = = ? = = = = = = = = = G = = = = = = = = = = = = = = 0 E120 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 E121 = = = = C = 3 = = = = (C) = = = = = = = = = = = = = = = = = G = 4 = = = = (G) = = = = = = = = = = = = = 0 E122 = = = = = ? = = = = (C) = = = = = = = G = = = = = = = = = = = ? = = = = (G) = = = = = = = A = = = = = = 0 E123 = = = (T) (C) = (3) = = = = C = T = = = = G T = = T = ? = = = (C) (G) = (4) = = = = G = C = = = = A C = = C = ? END BESTPAIRS2 Phase probabilities at each site with phase known positions indicated by = and missing data positions indicated by ? BEGIN PHASEPROBS ? = = = 1.00 = = = ? ? = = = = = = = ? ? = = = = = ? ? 1.00 1.00 ? ? ? ? ? ? ? = 1.00 1.00 = 1.00 1.00 = ? = = 1.00 ? ? 1.00 = ? = = = = = = = ? ? = 1.00 0.55 = 1.00 = = ? 1.00 = 1.00 ? ? 1.00 = = = = 0.83 = 0.91 ? ? ? ? = = 1.00 = 1.00 1.00 1.00 ? = = 1.00 = = = = ? = = ? ? ? ? ? ? ? = = = = 0.90 0.90 = ? = = = = = = = ? = = = = = = = ? ? = = = = = = = ? = = = = = = 1.00 ? = = = = = = = = ? = = = = = = = ? = = = = = = = ? = = = = = = = ? ? = 1.00 = 1.00 = = = = = 1.00 = = = = = = = = = ? = = = = = = = = = = = = = = = = = = = 1.00 0.71 = = = = = ? = = = = = 1.00 1.00 = = = = 1.00 1.00 = = = = 1.00 = = 0.84 = = = 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = = ? = = = 1.00 1.00 = = = = = 1.00 = 1.00 = 1.00 = 0.66 = = = = = = = = = = 1.00 = = 1.00 1.00 = 1.00 1.00 = 1.00 ? ? 1.00 0.98 = = = 0.63 = = 0.63 0.62 = = = = 0.55 = = = 1.00 1.00 = = 1.00 ? ? 1.00 = = = = = = = = = = = = 0.57 0.54 = = = 1.00 1.00 = = 1.00 = = 1.00 = = 0.54 0.51 0.63 0.63 = = = = = = = = = 0.99 0.99 1.00 1.00 = = 1.00 = = = = = 1.00 1.00 = 1.00 1.00 ? ? = 1.00 = = = = = = = 1.00 1.00 = 1.00 ? ? 1.00 1.00 = 0.52 0.71 = = = = = = = = 1.00 = = 1.00 1.00 = = = = = = = = = = = = 0.65 0.98 = 0.97 = = 0.58 = = = = = = = = = = = = = = = 1.00 1.00 1.00 = 1.00 1.00 ? ? ? 1.00 = 1.00 = = 1.00 1.00 = ? = = = = = = 0.85 = = = = = = = = = = = 1.00 = = 1.00 1.00 1.00 1.00 = = 1.00 1.00 = 1.00 = = 1.00 1.00 ? ? ? ? ? = 1.00 = = = = = = = 1.00 1.00 = 1.00 ? ? 1.00 1.00 = = = ? ? ? ? ? = = = 0.99 = = 1.00 1.00 1.00 1.00 = = 1.00 1.00 = 1.00 = 0.65 = = 0.74 0.60 = 0.59 = = = = 1.00 1.00 = 1.00 1.00 = = = = 1.00 1.00 = 1.00 = ? = = = = 0.88 ? ? = = = 1.00 = = 1.00 = = 1.00 1.00 = 1.00 ? ? 1.00 0.99 = = = = 0.96 0.95 ? ? = = 0.66 = = = = = = = = = = = = = = = = = = = = 1.00 = = = = = = = = = = = = = = = = = = = = = = 1.00 = 1.00 = = = 0.89 = = = = = = ? = = = = = = = = = = 0.83 = = = = = = 1.00 = = = = = = = = = = = = = = = = = = = = = = 0.95 = = 1.00 = 1.00 = = = = 1.00 1.00 = = 1.00 = 1.00 = = = = 0.95 0.95 ? ? = = 0.67 = = = = = = = = = = = = = = ? = = = = = = = = = 1.00 = = = = = = = = = = = = = = = = = = 0.65 = 0.65 = = = = 1.00 = 1.00 = = = = 1.00 1.00 = = 1.00 = 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0.58 = 0.58 = = = = = = 1.00 1.00 1.00 = 1.00 = 1.00 1.00 1.00 1.00 1.00 = = = = 0.85 = = 0.85 = = = = 1.00 = = 1.00 = = 1.00 1.00 = 1.00 ? ? 1.00 0.99 = = = = 0.64 = 0.64 = = = = = = = 1.00 1.00 = 1.00 ? = 1.00 1.00 = 1.00 1.00 = = = = = = = = 0.97 = = = = 1.00 1.00 = = 1.00 = 1.00 1.00 ? ? 1.00 = = = = 1.00 1.00 = = = = = 0.89 = = = = = = = = = = = = = = = = = = = = = = = = = = = 1.00 1.00 = = ? = 1.00 1.00 ? ? 1.00 = = = = = = = = = 0.93 = = 1.00 = 1.00 = = = = 1.00 1.00 = = 1.00 = 1.00 ? = ? = = 0.96 ? ? 0.98 = 1.00 1.00 = 1.00 = ? = = 1.00 1.00 = = 1.00 = 1.00 ? = = = = = = = = = 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 1.00 = 1.00 = = = = 0.66 = = = = = = = = = = = = = = = = = = ? = = = = 0.56 = = = = = = = 0.99 = = = = = = = = = 0.66 0.72 = 0.67 = = = = 1.00 = 1.00 = = = = 1.00 1.00 = = 1.00 = ? END PHASEPROBS