Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000146 AA 2 0 2 AT 9 4 13 TT 10 18 28 0.000 0.220 0.095 000370 AA 0 0 0 AG 3 0 3 GG 21 22 43 0.107 0.000 0.052 000426 GG 24 11 35 GT 0 8 8 TT 0 3 3 0.000 0.577 4.889 000722 CC 6 7 13 CT 8 11 19 TT 10 4 14 2.371 0.008 1.385 000742 CC 22 19 41 CT 0 1 1 TT 0 0 0 0.000 0.013 0.006 001407 AA 21 23 44 AG 3 0 3 GG 0 0 0 0.107 0.000 0.051 001486 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 001555 GG 0 0 0 GT 3 0 3 TT 21 23 44 0.107 0.000 0.051 001579 GG 24 22 46 GT 0 1 1 TT 0 0 0 0.000 0.011 0.005 001832 CC 0 5 5 CG 7 12 19 GG 17 6 23 0.700 0.048 0.130 002125 AA 11 6 17 AG 8 13 21 GG 5 4 9 2.003 0.445 0.299 002545 AA 0 0 0 AG 0 1 1 GG 24 21 45 0.000 0.012 0.006 002880 CC 0 3 3 CT 0 9 9 TT 24 11 35 0.000 0.277 3.846 003574 AA 1 0 1 AG 6 7 13 GG 15 14 29 0.153 0.840 0.106 003702 CC 0 0 0 CG 1 0 1 GG 22 23 45 0.011 0.000 0.006 003842 -- 23 12 35 +- 1 8 9 ++ 0 3 3 0.011 0.733 3.846 004735 CC 18 12 30 CT 6 8 14 TT 0 3 3 0.490 0.733 0.577 004796 AA 0 3 3 AG 0 8 8 GG 24 12 36 0.000 0.733 5.074 005667 CC 20 19 39 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 005768 AA 3 3 6 AG 6 5 11 GG 10 6 16 1.377 0.884 2.334 006194 GG 0 0 0 GT 1 0 1 TT 18 15 33 0.014 0.000 0.008 006478 AA 18 22 40 AG 5 0 5 GG 0 0 0 0.342 0.000 0.156 007103 AA 24 13 37 AT 0 5 5 TT 0 2 2 0.000 1.604 6.392 007609 GG 0 0 0 GT 1 0 1 TT 23 22 45 0.011 0.000 0.006 007838 GG 23 20 43 GT 1 3 4 TT 0 0 0 0.011 0.112 0.093 007853 AA 0 0 0 AT 1 0 1 TT 23 23 46 0.011 0.000 0.005 007863 AA 22 23 45 AG 2 0 2 GG 0 0 0 0.045 0.000 0.022 018049 CC 22 17 39 CT 0 4 4 TT 0 1 1 0.000 1.144 3.563 018143 AA 23 21 44 AG 0 2 2 GG 0 0 0 0.000 0.048 0.023 018215 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 018297 AA 0 0 0 AT 1 1 2 TT 22 22 44 0.011 0.011 0.023 019795 CC 12 7 19 CT 7 11 18 TT 2 3 5 0.399 0.159 0.054 019969 CC 0 3 3 CG 0 8 8 GG 24 12 36 0.000 0.733 5.074 020014 AA 7 6 13 AG 9 12 21 GG 8 5 13 1.484 0.048 0.532 020582 AA 0 3 3 AG 0 8 8 GG 23 11 34 0.000 0.577 4.704 020670 CC 21 22 43 CT 2 0 2 TT 0 0 0 0.048 0.000 0.023 022344 CC 1 0 1 CT 0 0 0 TT 21 23 44 22.000 0.000 45.000 022506 AA 3 3 6 AG 9 13 22 GG 11 7 18 0.277 0.631 0.032 030236 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 030336 CC 17 17 34 CT 4 5 9 TT 2 0 2 3.584 0.362 1.638 030542 AA 2 0 2 AG 4 5 9 GG 16 18 34 3.327 0.342 1.638 030618 CC 19 19 38 CT 2 4 6 TT 0 0 0 0.053 0.209 0.236 031228 CC 21 23 44 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 031246 CC 11 7 18 CT 8 10 18 TT 3 4 7 0.577 0.016 0.467 031668 GG 21 23 44 GT 3 0 3 TT 0 0 0 0.107 0.000 0.051 032071 AA 0 0 0 AG 1 0 1 GG 23 22 45 0.011 0.000 0.006 032081 CC 0 0 0 CT 1 0 1 TT 23 22 45 0.011 0.000 0.006 033506 AA 24 12 36 AG 0 8 8 GG 0 3 3 0.000 0.733 5.074 040900 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 040918 CC 0 3 3 CG 0 8 8 GG 24 12 36 0.000 0.733 5.074 041266 AA 16 17 33 AT 8 6 14 TT 0 0 0 0.960 0.517 1.439 041554 AA 22 20 42 AC 0 2 2 CC 0 0 0 0.000 0.050 0.024 042021 AA 16 16 32 AG 8 6 14 GG 0 0 0 0.960 0.548 1.482 042032 CC 22 22 44 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 042435 AA 19 23 42 AG 1 0 1 GG 0 0 0 0.013 0.000 0.006 042958 CC 9 3 12 CT 8 11 19 TT 7 7 14 2.593 0.159 1.066 043487 CC 12 4 16 CG 7 13 20 GG 4 3 7 2.175 1.839 0.032 043512 AA 0 0 0 AG 1 0 1 GG 22 20 42 0.011 0.000 0.006 043719 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 043991 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 044150 CC 17 17 34 CT 7 6 13 TT 0 0 0 0.700 0.517 1.211 044187 AA 16 15 31 AG 5 4 9 GG 0 0 0 0.383 0.263 0.643 044193 AA 0 0 0 AG 5 5 10 GG 15 14 29 0.408 0.436 0.843 044377 CC 0 0 0 CT 8 6 14 TT 16 16 32 0.960 0.548 1.482 044378 AA 0 0 0 AG 8 6 14 GG 16 16 32 0.960 0.548 1.482 046617 CC 0 0 0 CG 1 0 1 GG 23 23 46 0.011 0.000 0.005 046940 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 046978 AA 0 0 0 AC 0 1 1 CC 24 22 46 0.000 0.011 0.005 047016 CC 24 16 40 CT 0 7 7 TT 0 0 0 0.000 0.741 0.304 047921 CC 3 3 6 CT 5 7 12 TT 8 10 18 1.512 0.818 2.250 048688 AA 0 0 0 AT 2 0 2 TT 14 20 34 0.071 0.000 0.029 048707 GG 0 0 0 GT 6 5 11 TT 10 15 25 0.852 0.408 1.171 048887 CC 12 13 25 CT 4 6 10 TT 0 0 0 0.327 0.668 0.972 049503 CC 21 23 44 CT 2 0 2 TT 1 0 1 4.959 0.000 10.729 049510 GG 22 23 45 GT 2 0 2 TT 0 0 0 0.045 0.000 0.022 049944 CC 0 0 0 CT 0 5 5 TT 21 17 38 0.000 0.362 0.164 050442 CC 0 0 0 CT 0 1 1 TT 24 22 46 0.000 0.011 0.005 050667 CC 21 23 44 CT 2 0 2 TT 1 0 1 4.959 0.000 10.729 050693 AA 21 18 39 AG 3 5 8 GG 0 0 0 0.107 0.342 0.407 050714 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 050884 CC 17 17 34 CT 7 6 13 TT 0 0 0 0.700 0.517 1.211 051087 AA 13 11 24 AT 8 7 15 TT 3 5 8 0.897 2.767 3.633 051210 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 051241 AA 0 0 0 AG 3 0 3 GG 21 23 44 0.107 0.000 0.051 051299 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 051319 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 051515 AA 17 11 28 AG 6 7 13 GG 1 5 6 0.240 2.767 3.996 051529 AA 0 0 0 AT 4 4 8 TT 20 19 39 0.198 0.209 0.407 051530 CC 20 19 39 CT 4 4 8 TT 0 0 0 0.198 0.209 0.407 051637 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 051835 CC 0 0 0 CG 1 0 1 GG 23 23 46 0.011 0.000 0.005 051904 CC 21 12 33 CT 3 8 11 TT 0 3 3 0.107 0.733 2.074 051939 GG 0 0 0 GT 1 0 1 TT 22 23 45 0.011 0.000 0.006 052256 AA 19 19 38 AG 1 0 1 GG 0 0 0 0.013 0.000 0.007 052292 AA 0 2 2 AG 1 5 6 GG 21 15 36 0.012 2.001 4.593 052462 CC 14 20 34 CT 0 0 0 TT 1 0 1 15.000 0.000 35.000 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 003842: attt