Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 001007 T 3 0 3 C 45 46 91 001159 T 1 0 1 C 47 46 93 001371 G 1 0 1 A 47 46 93 001551 T 2 0 2 C 40 44 84 001847 A 0 1 1 G 42 45 87 001882 A 0 1 1 C 42 43 85 002020 G 1 0 1 A 41 44 85 002094 - 0 1 1 + 42 43 85 002157 C 2 3 5 G 44 41 85 002183 C 1 0 1 T 47 46 93 002400 G 10 2 12 A 38 38 76 002460 - 1 0 1 + 47 42 89 002632 A 1 0 1 G 47 42 89 002833 C 27 3 30 T 21 43 64 003150 T 1 0 1 G 47 46 93 003231 T 0 1 1 C 48 45 93 003287 A 8 0 8 G 38 44 82 003896 A 0 1 1 G 32 45 77 004039 C 5 0 5 A 27 46 73 004093 G 1 0 1 A 37 46 83 004468 - 1 0 1 + 45 46 91 004540 C 1 0 1 T 37 46 83 004781 C 10 0 10 T 28 46 74 005009 G 1 0 1 A 45 44 89 005066 G 1 0 1 A 45 44 89 005217 C 6 3 9 A 40 41 81 005496 A 27 6 33 G 9 40 49 011139 A 24 6 30 G 14 40 54 011218 - 1 0 1 + 47 46 93 011252 G 6 0 6 A 42 46 88 011254 A 14 0 14 G 34 46 80 011509 - 10 3 13 + 38 43 81 012406 G 6 0 6 A 26 46 72 012600 A 7 3 10 G 29 43 72 012954 T 1 0 1 G 45 42 87 025894 C 12 3 15 T 36 33 69 025976 A 1 0 1 G 47 36 83 026207 C 1 0 1 G 47 36 83 026728 T 1 0 1 C 45 40 85 026806 C 0 1 1 T 46 39 85 026930 G 1 1 2 A 45 39 84 027505 - 1 0 1 + 43 40 83 027599 C 1 0 1 T 43 40 83 027740 G 10 3 13 A 36 39 75 027764 T 2 0 2 C 46 42 88 027793 T 0 1 1 C 48 39 87 027812 A 1 0 1 T 47 40 87 034802 G 1 0 1 A 47 46 93 034866 - 2 3 5 + 46 43 89 034877 C 26 3 29 G 22 43 65 034898 C 1 0 1 T 47 46 93 035909 A 1 0 1 C 45 46 91 036194 G 0 1 1 T 48 45 93 036805 G 1 0 1 A 39 38 77 037178 A 1 0 1 C 37 36 73 046664 + 16 1 17 - 30 29 59 046860 A 1 0 1 G 47 36 83 047021 A 1 0 1 C 43 36 79 047361 T 0 5 5 C 48 41 89 047614 A 0 2 2 G 46 44 90 048064 C 1 0 1 T 47 44 91 048256 C 1 0 1 G 39 42 81 048709 T 28 9 37 G 14 33 47 048713 G 8 2 10 A 34 40 74 048925 G 7 0 7 A 35 42 77 049152 T 1 0 1 C 47 44 91 049196 C 1 0 1 T 47 44 91 056503 C 1 0 1 T 45 46 91 056528 C 0 1 1 T 46 45 91 056739 C 1 0 1 T 45 46 91 056810 G 1 0 1 T 47 46 93 056929 T 1 0 1 C 47 46 93 057055 A 11 0 11 G 37 46 83 057149 C 0 1 1 T 48 45 93 057239 T 2 0 2 C 46 46 92 057592 C 11 0 11 G 37 46 83 058029 + 30 9 39 - 14 33 47 058096 - 1 0 1 + 43 40 83 058240 A 7 0 7 G 37 40 77 058508 G 10 0 10 A 32 36 68 065806 C 2 2 4 T 40 40 80 065936 T 16 3 19 C 26 43 69 066064 T 1 0 1 A 41 46 87 066161 G 1 1 2 T 41 45 86 066200 A 2 0 2 G 40 46 86 066231 G 7 0 7 A 35 44 79 066256 C 0 1 1 T 40 43 83 066776 A 1 0 1 G 45 46 91 067477 G 2 0 2 A 46 46 92 067762 T 16 2 18 A 26 40 66 067780 T 0 28 28 C 42 14 56 069869 G 1 0 1 A 47 44 91 070025 G 10 3 13 A 38 41 79 070157 T 1 0 1 C 47 44 91 071104 C 0 25 25 T 40 15 55 071323 C 0 1 1 T 46 45 91 071419 C 0 1 1 T 46 45 91 082771 T 18 1 19 C 22 37 59 083099 A 0 3 3 G 48 43 91 083239 A 17 3 20 T 29 43 72 083507 G 3 0 3 A 39 46 85 083543 A 3 0 3 G 41 46 87 084104 G 21 3 24 T 27 41 68 084348 G 1 0 1 A 47 44 91 084378 A 1 0 1 G 47 44 91 084415 C 8 0 8 T 40 44 84 085483 C 20 3 23 G 28 41 69 086094 G 16 2 18 A 32 40 72 087732 T 4 0 4 C 44 28 72 088409 T 16 3 19 C 30 41 71 088569 A 19 3 22 G 27 43 70 088790 C 4 0 4 T 16 36 52 089314 A 15 2 17 C 33 40 73 089424 G 0 2 2 A 46 40 86 089483 A 1 0 1 T 45 42 87 089666 A 4 3 7 G 40 39 79 094286 G 1 0 1 A 45 46 91 094736 T 1 0 1 C 47 44 91 095120 A 1 0 1 G 45 46 91 097263 T 13 3 16 G 27 41 68 097268 C 13 3 16 T 27 41 68 097312 G 1 0 1 A 43 46 89 097918 A 8 0 8 C 40 44 84 098318 A 2 0 2 G 44 42 86 098373 G 9 2 11 A 37 40 77 098505 C 1 0 1 A 47 46 93 098692 A 1 0 1 T 47 46 93 098705 T 1 0 1 A 47 46 93 098818 T 2 0 2 C 46 46 92 098982 A 1 0 1 G 47 46 93 099092 A 0 2 2 G 48 44 92 099178 A 0 1 1 T 48 45 93 100242 T 0 28 28 C 48 18 66 103674 G 12 3 15 A 34 43 77 103712 C 2 0 2 T 44 46 90 104364 A 1 0 1 G 45 46 91 104394 T 0 2 2 C 46 44 90 104439 A 30 6 36 G 16 40 56 104829 G 31 10 41 A 17 34 51 104953 T 0 2 2 C 44 36 80 104960 G 16 2 18 A 28 36 64 106110 G 1 0 1 T 45 44 89 107764 A 3 0 3 C 37 40 77 108192 A 1 0 1 G 37 38 75 108582 C 2 0 2 T 42 46 88 108717 - 0 3 3 + 44 43 87 109064 T 1 0 1 G 45 46 91 109162 A 2 0 2 G 44 46 90 109477 G 2 0 2 A 46 46 92 109600 G 13 3 16 A 35 43 78 109653 T 1 0 1 C 47 46 93 114497 C 10 3 13 T 38 41 79 114613 A 10 3 13 G 38 41 79 114615 C 0 1 1 G 48 43 91 114636 T 1 0 1 C 47 44 91 115173 G 20 3 23 A 26 43 69 115762 T 3 0 3 C 45 46 91 115996 A 2 0 2 T 44 44 88 116123 C 3 0 3 T 41 44 85 116163 T 2 3 5 C 42 41 83 116305 T 1 1 2 C 39 41 80 116312 T 3 0 3 C 37 44 81 116313 G 4 0 4 A 38 44 82 116349 T 1 0 1 C 31 24 55 119133 G 2 0 2 A 46 44 90 119231 C 0 5 5 T 48 41 89 119324 A 2 0 2 C 46 46 92 119403 A 21 9 30 G 27 37 64 119554 C 2 0 2 T 46 42 88 119568 - 3 0 3 + 45 42 87 119796 + 8 0 8 - 40 42 82 120288 C 5 5 10 T 43 41 84 120353 T 0 5 5 C 48 41 89 120366 G 9 4 13 C 39 42 81 120376 T 16 31 47 C 32 15 47 121401 A 2 3 5 G 46 41 87 121995 A 4 0 4 G 44 46 90 122264 + 10 4 14 - 38 42 80 122451 G 0 2 2 A 46 44 90 122695 G 0 7 7 A 48 39 87 122968 A 5 0 5 G 43 46 89 123019 T 1 0 1 C 47 46 93 123021 G 8 0 8 A 40 46 86 123261 T 2 0 2 C 44 44 88 123333 C 1 0 1 T 45 44 89 123487 C 0 1 1 T 44 45 89 123575 G 4 0 4 T 40 46 86 123614 T 0 2 2 G 44 42 86 123663 C 6 0 6 T 38 46 84 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 002094: atatagaagcatagtgc 002460: aa 004468: t 011218: ct 011509: atta 027505: CT 034866: ctttt 046664: t 058029: GAGT 058096: CAAA 108717: ga 119568: taga 119796: g 122264: C