Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000579 00000 ------------ - 0.58 0.46 0.52 + 0.42 0.54 0.48 0000 --- --- --- --- 001383 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 001524 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 004439 00000 ------------ A 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 004583 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 005068 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009581 00000 ------------ A 0.82 1.00 0.91 T 0.18 0.00 0.09 0000 --- --- --- --- 009597 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010783 00000 ------------ G 1.00 0.63 0.81 A 0.00 0.37 0.19 0000 --- --- --- --- 011066 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011896 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 012003 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 012020 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012197 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 012625 00000 ------------ T 1.00 0.61 0.80 G 0.00 0.39 0.20 0000 --- --- --- --- 012841 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012843 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012881 00000 ------------ T 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 013749 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 013859 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 013992 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 014110 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 014214 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014681 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014904 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014985 00000 ------------ C 0.81 1.00 0.91 G 0.19 0.00 0.09 0000 --- --- --- --- 014996 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015200 00000 ------------ G 0.95 0.95 0.95 A 0.05 0.05 0.05 0000 --- --- --- --- 015246 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015956 00000 ------------ G 0.67 0.46 0.57 A 0.33 0.54 0.43 0000 --- --- --- --- 016150 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016279 00352 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0106 TTG CTG LEU(L) LEU(L) 016349 00422 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0129 GCT GGT ALA(A) GLY(G) 016472 00000 ------------ - 0.00 0.37 0.19 + 1.00 0.63 0.81 0000 --- --- --- --- 016567 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016713 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 016714 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 016766 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016834 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019047 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 019354 00000 ------------ T 0.48 0.91 0.70 C 0.52 0.09 0.30 0000 --- --- --- --- 019833 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019920 00487 NON-SYN G 1.00 0.96 0.98 A 0.00 0.04 0.02 0151 GCT ACT ALA(A) THR(T) 020409 00000 ------------ - 0.52 0.09 0.31 + 0.48 0.91 0.69 0000 --- --- --- --- 020639 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 020712 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020767 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022746 00000 ------------ G 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 022747 00000 ------------ G 0.91 0.86 0.89 C 0.09 0.14 0.11 0000 --- --- --- --- 022905 00000 ------------ T 0.88 1.00 0.95 C 0.12 0.00 0.05 0000 --- --- --- --- 023202 00000 ------------ G 0.68 0.93 0.82 A 0.32 0.07 0.18 0000 --- --- --- --- 023420 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023856 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 023873 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 023918 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 023958 00000 ------------ A 1.00 0.60 0.82 T 0.00 0.40 0.18 0000 --- --- --- --- 024094 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024438 00000 ------------ A 0.92 1.00 0.95 G 0.08 0.00 0.05 0000 --- --- --- --- 024559 00000 ------------ G 1.00 0.86 0.94 A 0.00 0.14 0.06 0000 --- --- --- --- 024621 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 024823 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024824 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 025115 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 025204 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 025605 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025974 00000 ------------ A 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 028545 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 028581 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029250 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 029408 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 030391 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030529 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030652 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 031174 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031329 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 031989 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 032058 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 032598 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033186 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033407 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033467 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033499 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 033913 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034022 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 034181 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035044 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 035499 00000 ------------ T 0.46 0.91 0.68 A 0.54 0.09 0.32 0000 --- --- --- --- 035507 00000 ------------ C 0.62 0.46 0.54 T 0.38 0.54 0.46 0000 --- --- --- --- 036318 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037046 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037249 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 037534 02232 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0732 CCA CCG PRO(P) PRO(P) 037627 02325 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0763 GAG GAA GLU(E) GLU(E) 037753 02451 SYNON A 0.96 1.00 0.98 C 0.04 0.00 0.02 0805 ATA ATC ILE(I) ILE(I) 038707 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 038822 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 038848 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039243 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039548 00000 ------------ - 0.08 0.02 0.05 + 0.92 0.98 0.95 0000 --- --- --- --- 040181 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 040243 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 040426 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040747 00000 ------------ C 1.00 0.61 0.82 T 0.00 0.39 0.18 0000 --- --- --- --- 040830 00000 ------------ - 1.00 0.93 0.97 + 0.00 0.07 0.03 0000 --- --- --- --- 041028 03378 3' UTR C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 041696 04046 3' UTR A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 041951 04301 3' UTR A 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 042269 00000 ------------ C 0.52 0.93 0.72 G 0.48 0.07 0.28 0000 --- --- --- --- 042384 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 043049 00000 ------------ - 0.00 0.38 0.18 + 1.00 0.62 0.82 0000 --- --- --- --- 043269 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 043379 00000 ------------ - 0.38 0.05 0.22 + 0.62 0.95 0.78 0000 --- --- --- --- 043461 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 043509 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 043545 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 043593 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 043788 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 044035 00000 ------------ A 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000579: T 013992: T 016472: A 016766: TTC 020409: T 023873: TTGGTGCTT 024824: T 025204: A 028545: T 035044: TAA 037249: T 039548: A 040830: T 043049: TTA 043379: TT 043461: G