NFKBIA Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

GGGTTCCTGG GTAAATTTCT ATGCATTTCA GTTTCTTTTT AGGGAAGTAG 50 GAACAATATC TATCTTACAA GATTAGTTCT GAGAACAATG TGGTACATAA 100 GGCGCTGGAA TTCTTTCAAA AATTTATACC CTGACATTTC CAAGAGCCAT 150 GGTCACCCTT ACAAAGGAGA GTTAGGCATG CATTTGTAGA CAAGCAATAT 200 | var(156):[A:0.15] GACTTTTAAG CTAGAAAAGA CCTTAAGTAA CATTCAATCT AATCTTATTA 250 TAAAAGTTAA GTATACCACA AAAAAGTTAA CTGACCTCTC CAACTAATGT 300 GCAGTCAAGT AAAGATAGAA CCTGGAATTG AGATGTCCCA TTGCAGTCAC 350 | var(316):[C:0.01] | var(350):[:0.04] TGTTTCACCT TGCCTCAATC ATTGTAGATT TGCATATCAT AAACCTGCAG 400 AGACAATGGT GTCTATCCCT GGGAAGTTTT CATTGTAACA TGTGATCATT 450 ATTACCCTGG AGGGTCTATC TGATTTTAAT TTTTTTCCCT TCATACTTGG 500 TCTCTCTCTA TCGAGTCAGA TTTCTTTCAT TCTAATATTA GGGGAGGGGT 550 | var(520):[T:0.03] | var(533):[C:0.01] | var(550):[C:0.15] GGAGATACGA AGAGAGGGGA AGGATTGGTT AGTACAAGGC CAGTCAAGGT 600 | var(558):[T:0.16] AAAGATGATT GCAATAATCA CCAGAAATCT CTGCAGAACT ACAGAGGCCT 650 CCTGGGACTA ATTCTGAAGA GCTCTGACCG AAGTTTGCTT TATTTTGCCT 700 GTACCAATTC TACCAAGTAG ATGAATTCAG TCCATGGCTT GCAGGCTTGG 750 AGGTGGAGGT GGAGTGGAGA GCATAAATTA TATTTCTGCA GGTGAAACCA 800 GAGCATAGTG AGCCGAAACC CCTTTCTACC CAGGTGGCGT GAATGGGTCC 850 AACTGCTACT GTCCCCCAGG ACAAGAGAGC AAGGAGGGGC GGGCAGGATG 900 GGACTACCTT GAGCCTCCCG CAGGATGCCT GGCAACTACT TTCTTAGTGG 950 | var(906):[G:0.14] TCCTTAAGGT CCAATCGCGG TTAAGGCACT AACTAAACTC ATTCTTCAGC 1000 CTCCTTCTCT AAGTTCTCCT CGAATTTGGG TGCCCAGAAG TAGGCTCACG 1050 | var(1029):[T:0.01] ATCCTTTTTC TGCGGGAGCA CAATGTAGGT CAGATAGCAT AAACGAATAG 1100 | var(1073):[G:0.16] CTACTTATGA ACACAATAGC TACTCTGCTA TTGCAAGGTA TCCACAACCA 1150 | var(1128):[T:0.17] CCACTACAAA CATTAACACC TTGCTTTACT TGGGAAACAA AAAAAATCAT 1200 GGTCCTATTC AGCAGTTTCC CCATACAGGG AGCGTTTGCC CCTCCCCCAG 1250 TCAACAGGGC TGTTCATCCC TAGGAAGTGA TTTGAGAGTT CTCCAAGGAT 1300 TTAGGCTTTT CACTCCTCCA AAGCTTTCAC AACTTCTACC TGGCGGGGGT 1350 GCGTGGGGGG GTGGGGGGGA GGGGGCGAAG CTAAAAGTTC CTTTGCTGCA 1400 | var(1360):[:0.01] | var(1368):[:0.78] AAGAGCCTGG TATAGGCAGA AACACCGGCG CGGCCTGCAG CCCCCTAACC 1450 | var(1412):[T:0.13] ACAGTGCGTC CTTCCCCTTA GAAGTCTGGG GAAAGCAAAT CCCTACGCCC 1500 | var(1497):[A:0.01] AGCCATCATT TCCACTCTTG CGTTTTCAAA AGATCAAAAA ACGGAAAGGA 1550 CCGGCAGGTT GGCAAACCCC AAAGAGGGAC CGCCCATCAG GTCGGCGTCC 1600 TTGGGATCTC AGCAGCCGAC GACCCCAATT CAAATCGATC GTGGGAAACC 1650 CCAGGGAAAG AAGGCTCACT TGCAGAGGGA CAGGATTACA GGGTGCAGGC 1700 | var(1665):[T:0.15] TGCAGGGAAG TACCGGGGGG AGGGGGCCTG GTCGGAAGGA CTTTCCAGCC 1750 ACTCGGCGCT CATCAAAAAG TTCCCTGTCC GTGACCCTAG TGGCTCATCG 1800 CAGGGAGTTT CTCCGATGAA CCCCAGCTCA GGGTTTAGGC TTCTTTTTCC 1850 CCCTAGCAGA GGACGAAGCC AGTTCTCTTT TTCTGGTCTG ACTGGCTTGG 1900 AAATTCCCCG AGCCTGACCC CGCCCCAGAG AAATCCCCAG CCAGCGTTTA 1950 TAGGGCGCCG CGGCGGCGCT GCAGAGCCCA CAGCAGTCCG TGCCGCCGTC 2000 | Exon 1 | UTR CTGCCGTCCC GCCCGCCCGC CCGCCAGCGC CCCAGCGAGG AAGCAGCGCG 2050 | var(2002):[:0.99] | var(2014):[G:0.01] | var(2015):[T:0.01] | var(2017):[:0.99] CAGCCCGCGG CCCAGCGCAC CCGCAGCAGC GCCCGCAGCT CGTCCGCGCC 2100 ATGTTCCAGG CGGCCGAGCG CCCCCAGGAG TGGGCCATGG AGGGCCCCCG 2150 M F Q A A E R P Q E W A M E G P R 17 CGACGGGCTG AAGAAGGAGC GGCTACTGGA CGACCGCCAC GACAGCGGCC 2200 | var(2181):[T:0.27] D G L K K E R L L D D R H D S G 33 TGGACTCCAT GAAAGACGAG GAGTACGAGC AGATGGTCAA GGAGCTGCAG 2250 L D S M K D E E Y E Q M V K E L Q 50 GAGATCCGCC TCGAGCCGCA GGAGGTGCCG CGCGGCTCGG AGCCCTGGAA 2300 E I R L E P Q E V P R G S E P W K 67 GCAGCAGCTC ACCGAGGACG GGGACTCGTA AGTGGCGGAG GCCCGGGGCT 2350 Q Q L T E D G D S 76 GGGGGTCGTC GGGAGGGCGG GACGCGCGCG GCCTGGGGGT GGGAGGCGCC 2400 | var(2351):[A:0.01] | var(2384):[A:0.15] GGGCCTGGAG CCCGAGCCGG GGGACCAGCG ATGCAGCCGG GCGGGCGCCG 2450 CGGCACCCCG GGGCTCCTGC ACCGCCCCGA ACGCTGCAGG GCTGCAGGGC 2500 | var(2453):[:0.01] CGCGCGGGGC ACCGGCCCAA CTCGGAGGGG CGGCGGCTGG GCCCTGGTGG 2550 ATGGCAGCGT CGCCACACGC CCCCTCCCCC CAAGACCCGT CCTCTAGGCC 2600 | var(2583):[:0.82] GGGGGCGGGG CGGCAGCGGG GACGCGAAGT CCCCGGTTGC ATAAGGCGGG 2650 | var(2606):[T:0.02] GCGGGAGTTT CTGGCCGCTG GCGGGCGCCG AGCAGCCGGG AGGGGAAGTA 2700 CAGGGCGTTC CGAGCTGGCG GGAGGGCGGG GCGGTCTGGC CGGCGCCCGC 2750 CGGGGCCGCG GGGGGAGGGG GGCGGAAAGT CCCTGGGCGC CTGCCAGGAA 2800 CACTCAGCTC ATAATAACCT CGCGGAAAAC ACCGCGGCCT CGGCCTCCAG 2850 AAACCCCGGC CTTGCGCAAT CCCCCGCAGC CCGCGCCTCC CTGGGCCCCA 2900 CGCGGTGCAC TCACCACCCC TGGGGTTTTT CCCTCTCTTC CCCACAGGTT 2950 | Exon 2 F 77 CCTGCACTTG GCCATCATCC ATGAAGAAAA GGCACTGACC ATGGAAGTGA 3000 | var(2963):[T:0.02] L H L A I I H E E K A L T M E V 93 TCCGCCAGGT GAAGGGAGAC CTGGCCTTCC TCAACTTCCA GAACAACCTG 3050 | var(3026):[T:0.15] I R Q V K G D L A F L N F Q N N L 110 CAGCAGGTGC GCCGCTTGCC TGGCCCGGGT TCTCTCTGAC CCTGGGACGT 3100 Q Q 112 AGCTGATGTA GCAGAGTCAC CCCAGATCCT TTCTGAATTC AGGGCCACTG 3150 | var(3115):[:0.07] AGCACTATTC ACCCTCACCT TTTACTTCAC ATCAGCCCAC ATCCTAGAGA 3200 | var(3154):[C:0.01] | var(3157):[G:0.01] | var(3160):[T:0.45] | var(3168):[T:0.01] | var(3187):[T:0.18] GTGAAGGAAA TTCCACTGAT TTGGTGAGGT CTTTATGACC CACCTGGAGC 3250 CTCTGCTATT TGCCAGCCCT CCCCACCCCC CTGTCTAGGA GGAGCAGCAC 3300 CCAACCAGGA GACACGGGTT GAGGGGAACT CGGGGTGTGG GTTTGGTCCA 3350 TGGCTTACTT TCTCTGGTCT CTCTTGCATT CGTAGACTCC ACTCCACTTG 3400 | Exon 3 T P L H L 117 GCTGTGATCA CCAACCAGCC AGAAATTGCT GAGGCACTTC TGGGAGCTGG 3450 A V I T N Q P E I A E A L L G A G 134 CTGTGATCCT GAGCTCCGAG ACTTTCGAGG AAATACCCCC CTACACCTTG 3500 C D P E L R D F R G N T P L H L 150 CCTGTGAGCA GGGCTGCCTG GCCAGCGTGG GAGTCCTGAC TCAGTCCTGC 3550 A C E Q G C L A S V G V L T Q S C 167 ACCACCCCGC ACCTCCACTC CATCCTGAAG GCTACCAACT ACAATGGTAT 3600 T T P H L H S I L K A T N Y N 182 GTCTGCCTCC CTGCCCTGCC CCACCCCCTC GGAGGGCAGG TGACGTGGAG 3650 | var(3645):[A:0.12] AAGGGGCAGG TGGGCCAACT TAAGGAGTCC AGGCAAGAGC TTAAACTCCT 3700 AACATTTGGA AGGTTGAGAA AATATGTGTG CAAAGTGCCT ATTGGATGCC 3750 TTTATAAAGT TCTTTCAGAA CCCAGACTGT GGGTTCTTAA AATTCAGAAG 3800 ATAAGACTAC TTGTTCCATA AAAGAATAGG TGAAAGGAGT GAGGGTTGAA 3850 ACAGGTGGTT ATACTTTTTT CCTTTTGTTC TTCCAGGCCA CACGTGTCTA 3900 | var(3858):[A:0.11] | Exon 4 G H T C L 187 CACTTAGCCT CTATCCATGG CTACCTGGGC ATCGTGGAGC TTTTGGTGTC 3950 H L A S I H G Y L G I V E L L V S 204 CTTGGGTGCT GATGTCAATG CTCAGGTTGG TGCTTCCTGC CCCCGACGCA 4000 | var(3992):[T:0.12] L G A D V N A Q 212 CTGAGTCAGG CTCCTCGTGC TTATGTTGTG AGCAGAAATT CCAAATGCAG 4050 CCATAAGCAT CTCAAATTCC TTTTGGTTTC AGGAGCCCTG TAATGGCCGG 4100 | Exon 5 E P C N G R 218 ACTGCCCTTC ACCTCGCAGT GGACCTGCAA AATCCTGACC TGGTGTCACT 4150 T A L H L A V D L Q N P D L V S L 235 CCTGTTGAAG TGTGGGGCTG ATGTCAACAG AGTTACCTAC CAGGGCTATT 4200 L L K C G A D V N R V T Y Q G Y 251 CTCCCTACCA GCTCACCTGG GGCCGCCCAA GCACCCGGAT ACAGCAGCAG 4250 S P Y Q L T W G R P S T R I Q Q Q 268 CTGGGCCAGC TGACACTAGA AAACCTTCAG ATGCTGCCAG AGAGTGAGGA 4300 L G Q L T L E N L Q M L P E S E D 285 TGAGGAGAGC TATGACACAG AGTCAGAGTT CACGGAGTTC ACAGAGGACG 4350 E E S Y D T E S E F T E F T E D 301 AGGTGAGTCT GTGAACTCCT TCGGCGCTCT AACTAATGAG GTGCCATTCC 4400 E 302 CTTCACCCTC CCAGGCCCCT AGAGCTGCTC CTTATCAGAG GGGTATCTAC 4450 ATAATGAGTC TCTCAAATTT CTGTGCATAA CCAGTATCCC AAGAATGTAC 4500 CTGCCCCCCC CCTTTTTTTA ATAGCTTACT CTTTTTTTAA AGAGAAGCAT 4550 | var(4509):[A:0.01] | var(4511):[:0.27] | var(4512):[T:0.03] TAAAGGCAAA CTCCCTCAGC CTGTAAAGTT CATTATATTT GGGCTATGGA 4600 | var(4564):[T:0.21] GAATGGAGTC CAAGAGTTAT TTCCAGTAGT GGCCTCCCCA TCCCGGTAGC 4650 TTGGCAGAGC TCCGCTCCGG AAGCTTAACG TGTCTTTTTT CCCCTTGTTT 4700 | var(4669):[A:0.02] TCAGCTGCCC TATGATGACT GTGTGTTTGG AGGCCAGCGT CTGACGTTAT 4750 | Exon 6 L P Y D D C V F G G Q R L T L 317 GAGTGCAAAG GGGCTGAAAG AACATGGACT TGTATATTTG TACAAAAAAA 4800 | UTR | var(4754):[T:0.50] | var(4770):[C:0.01] 317 AAGTTTTATT TTTCTAAAAA AAGAAAAAAG AAGAAAAAAT TTAAAGGGTG 4850 | var(4827):[:0.03] TACTTATATC CACACTGCAC ACTGCCTGGC CCAAAACGTC TTATTTTGTG 4900 | var(4878):[A:0.48] | var(4896):[:0.97] GTAGGATCAG CCCTCATTTT GTTGCTTTTG TGAACTTTTT GTAGGGGACG 4950 AGAAAGATCA TTGAAATTCT GAGAAAACTT CTTTTAAACC TCACCTTTGT 5000 GGGGTTTTTG GAGAAGGTTA TCAAAAATTT CATGGAAGGA CCACATTTTA 5050 | var(5017):[T:0.02] TATTTATTGT GCTTCGAGTG ACTGACCCCA GTGGTATCCT GTGACATGTA 5100 ACAGCCAGGA GTGTTAAGCG TTCAGTGATG TGGGGTGAAA AGTTACTACC 5150 TGTCAAGGTT TGTGTTACCC TCCTGTAAAT GGTGTACATA ATGTATTGTT 5200 GGTAATTATT TTGGTACTTT TATGATGTAT ATTTATTAAA CAGATTTTTA 5250 CAAATGAGTT ATCCTGATCA TTTTCTTCAG GCTGCCGTGG GCCTCCGGTT 5300 CTGAAGTTCC ATCCTCCGGC AGAGGTGGAG GTGGAGCAGT GTGAGGGAGG 5350 AGGTAACTCC CAGCAGCTTC TCACACCTGA CACCCAGCCT CCAGCAAAGC 5400 TTTGCAGGCA CCCTGGGCCC AGTGTGTGGG AGGGAGGCTG TTGCAAGGTT 5450 ATAGGAAATT ACCAATCTCA GGCTTGGGGT GGAAGCATGC TGTTTGGCCT 5500 GTGGTTGGAG ACCTCTCCAT TGTCATTCTG TCATCCCGTT GATTTAAACT 5550 | var(5519):[G:0.26] TCCTGGACCC TAATTGCCAG TTGAGGAAAT TATTTTGGCC AAGAAGAATA 5600 TGCTGAATTC ATATAGAGCT GGGAAAGATC TCACTAATAC AGGAAGTTCC 5650 TAAGGACATA GGCTCAGAAA TGGGACTGCA CTGACATTTG TTAGCAGATG 5700 CTCACCTCTG AGCCTCAGTT TTCTCATTTA TTAGCTGGGC TGTTGTGAAA 5750 | REPEAT ATTACATAAG ACAATCCACG TAAAATGCAT AGCAGAGCGG CAGGCACGTA 5800 GTGCTAAAGA AAAACAAGCT GTTACGCAAC GTTCTTTATG TCATACCAGG 5850 AGAAACAAGT CCAGAGAGAA TGTCCTGTCT AGGGTCACCT TGCAGGAGAA 5900 ATAGGTGGTT AACATATTTC ATACGTGCTC GTTTTGGGGT AAACATCTTT 5950 TAAGAGCATT CCATCTCTTA AATCTATGTG TTATTGGCTG TAGTAGAAAA 6000 GTAATAAAGG CTTGAAGGGT CTTATCAGTT CAGTCTACTG ATTGTACTGG 6050 ACGATTCTAC AGGAGCAAAT GTCACAAGAA ACCAGTAATG TGAAACTTGG 6100 CTTAGATGCT CTATCTTGAG GTTTTCATCC CTAAAATGGC TCTCTTGCCT 6150 AGGTAGAGAG AAGAATAAAG ATGGGTATAC TGAAAGCCCA GACT