NFE2 Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

GTGGTCTAAG GTCATGCAAT TTGAGGTCAT ACAATCCTAT CCTCTGTCCT 50 TCTTTTTCTT TCTTTTCTTT TTTTTTTTTT TTTTTTTTTT TTCCGAAACA 100 | REPEAT GAGTCTCACT CTGTCGCCCA GGCTGGAGTG CAGTGGTGCG ATCTTAGCTC 150 ACTGCAACCT CCGCCTCCCG GGTTCAAGCA ATTCTCCCTG CCTCAGCCTC 200 | var(179):[T:0.01] CTGAGTAGCT GGGATTACAG GCGCCCACCA CCAAGCCTGG CTATTATTTG 250 TATTTTTAGT AGAGATGGGG GTTTCACCAT GTTGGCCAGG CTGGTTTCGA 300 ACTCCTGACC TCAGGTGATC CACCTGCCTC AGCCTCCCAA AGTCCTAGGA 350 TTACAGGTGT GAGCCACTGC ACCTGGCCGT TTTTTTTTTT TTTTTTTTTT 400 | REPEAT TTTGAGACAG GGTCTTGCTC TGTCACCCAG GCTCTCGAGT GCGGTGGCAC 450 AATCATGGCT CACTGCAGCC GTGACCTTTC AGGTTCAAGT GATCCTCCCA 500 CCTCAGCCTC CTGAGTAGCT GGGACCACAG ATGTGTGCCA TTATGCCTAG 550 CTAATTTCTG CATTTTTAGT GGAGATGGGT TTTCACCGTG TTTCTCAGGC 600 TGATCTCAAA CTCCTGGGCT CAAGCAATCC TTCCACCTTG GCCTCCCAAA 650 GTGCTTCCCC TCTCCCATGT TTCCTTCATC CTAGCCTGCT TCCCTATACT 700 GATATGGCAC GGTATGTCTG TGTGCGTGCA CATAGACACA ATGTCTGACC 750 GTAGAGATCA GGAAGACCTT GCCAAATCTA CTTGGAATCT CTTGCTGACG 800 | var(783):[G:0.01] GCAGGGAAAA CAGATGCAAG GAAGGTGGGT GTCAGGGAAT AGGGAGGTAG 850 CATGAGGAGA GGGACTGACA GAAGAAGATA AAGACACGGG TGAGGGTTTG 900 CTGAGAATTC TAAGCTATCC AAGCAGAAAG GGACCTCCAA GGTCAATTTG 950 | REPEAT TCCAACTCCC TGGTTTTACA AATGAGGAAA CAGAGGCCCA GAGAAGTGAG 1000 | var(969):[T:0.03] ATGGCTTGCC CAACATCACA CTGCTGCTTT GTGGCAGAGC TGCAACTAGA 1050 ACCCAGGTCA AAAGAAAAGG GACTGGAGGG CAGTGTATAT TCAAGGCTCT 1100 AAAGAGACAT TGCCCAGAAG GAGAAAGAGA GACTGACACT CCACAGAAAG 1150 AACTGATGAA TGTAGACTTC CAGTAGAGGT TTGGAGTATG AAGATACAGG 1200 GGCAGGAGGG GAAGGTGCCT AGAAGACATT ATAGTCAGGT AGAGTCAGGT 1250 TCTGGACCTC ATCCTGCTAT TATTTATCAG CTTCAGTCTC AGTTTCTGAT 1300 GTACCTTTAG AATCTTTGTG AAAACCAGTC TTTTTTTTTT TTTTTTTTTT 1350 | REPEAT GAGACATAGT CTAACTCTGT CAGCCAGGCT GGAGTGCAGT GGCGCGATCT 1400 CGGCTCTCTG CAGCCTCCAC CTCCTGGGTT CAAGTGATTC TCCTGCCTCA 1450 GCTTCCCGAG TAGCTGGGAC TACAGACATG TGCCACCCCA CCACGCCCAG 1500 CTAATTTTTG TATTTTTAGT AGAGACGGGG TTTCCATGTT GGCCAGGCTG 1550 GTCTCGAACT CCTGACCTCA GGTGATCCAC CTGCCTTGGC CTCCCAAAGT 1600 GCTGGGATTA CAGGCCTGAG CCACCGCGCC CGATGAAAAC CAATCTTATA 1650 AACTAAGCTT GCAATACCAG CACAGTTCTT AACAAGTGCT TACTAAGTCT 1700 TTACTAAGGT TATATTACCT CAGAAGAGGA AAGACTTCTG ATTGTATGGG 1750 TTAAGGTATG GCCCAAATGA CCCTGTGAGG ACACAGGACA GAGGTCCAGT 1800 GTCTCCAGAG CCCATTCCTT CTGTGCCTCT GCTGCCTGCA ACTGATAAAC 1850 CTCTTATCTG GCCCAGGCAG GGGAGCCCAG GGCCAGGATA GGAGGAGAGG 1900 GCAGAGCTGC TATCAACCAC CAGGCCTGGG CCATATCTTG GAGAGGAGGA 1950 GGGGCTGTCT GCTTGCCTCT TTCCACAACT TGTTCTTGGG GATCCTCAAG 2000 | Exon 1 | UTR CATATACTGT CATCATCTTG GAAAGAAAAG GCTGAGAACG TAAAACTGAG 2050 GACAGAGGAG GAAAGCAGGG TGACCCCTGA TGTTGCCCTA GAAAATGGAA 2100 AACAAAACAC AGCAAAACAG AAAAACAGAA GATCTGACTC TGCCTTTAGC 2150 CAGGAAAACA GTTTGGGGGA GTAAAAAGTA TTAGGGAAAA GAGTGGGCAT 2200 TTTGCCTGGA AAAAAGGTAA AGACCTCCTG TGCTACCAAA GGAACTGACT 2250 GTGGCCATAG TTGGCGAGGT GGAGATCACA ACACAGGAAA AGACTTTCCA 2300 TCTTAAGGGA TTGATGAATC CAGCATGAGT GAGGATGGGG AGGAGGCGGT 2350 CTCTCCTTCC CTCAGGGGAA GCTGGAGGGA GCCCCTCCAA GGAGGTAGTG 2400 | var(2382):[T:0.02] CAAACTTGCT GACCCTAGCA GGTGTAGCTC TAACACCTCT TTTCCTTTGA 2450 CACAGGTTTC TAGAGCCATC TGGGCTTTCC GGGAACCTGG ACCAGACTCT 2500 | Exon 2 | UTR | var(2481):[A:0.01] GGCCCAGTAG GATGTCCCCG TGTCCTCCCC AGCAGAGCAG GAACAGGGTG 2550 M S P C P P Q Q S R N R V 13 ATACAGCTGT CCACTTCAGA GCTAGGAGAG ATGGAACTGA CTTGGCAGGA 2600 I Q L S T S E L G E M E L T W Q E 30 GATCATGTCC ATCACCGAGC TGCAGGTGAG TAAGGGGGGA TAGGGCAGGG 2650 I M S I T E L Q 38 GAGGCCGTGT GTCGGAGAAG AGAGAAGCAG GGAGTTGGCC AGGACTGAGG 2700 CAGAGGGCAG GAGCAAGCAG GGCTCAGGGC TGGTAATGCT CCAGGCACTG 2750 GGAAAGGAAG GGAAAGATCC GGATGGAAGA CACTGAGGAA CGTTGAGGAG 2800 | var(2792):[C:0.02] GAGGAGTGGA GGAGCAGTGG TGGGGAGGGA ATGATCTGAT TGGGAGTGTA 2850 | var(2834):[G:0.01] GGCTCTCTCA GCAGCCACTT GACTCACATC TCTCTCTACC CCACCTCCTG 2900 CTCTCCCTCC CGTGCTCACC TTCTTCTCTT CTGACCTGCC TCTCTGATCC 2950 | var(2910):[T:0.01] | var(2931):[T:0.01] TGCCATCTTC TTCCCTCATT ACCTCCGCCT GCCCTTGGCA ACTGGGCCCG 3000 | var(2972):[T:0.01] TTTACCCCAG GTAACAGAGC AGTAGTTCAG GGGCCTCAGG AAGGGGAGTC 3050 | var(3020):[G:0.01] GGACTATGCC AGGGTCCTCT CCTCCTGCTA CTTGGACAAA GGGGTGTCTG 3100 TTGGCTTGAC AATGATGCCT TTGTCCCCAG CTGGGCTGGA GCAGGGTGGC 3150 TCCCTGATGT AGGTTGGGGG CCTTGTTTCT AGCATGTTCT CTACTTCTCG 3200 CTGCACCTGG GCAGGGACAG AGGGACTGAA GAGGAGAAGG CAGAGCTTGT 3250 GCTGGCTCCC CAAGGTGCTT CTTAGCCCCC AGCCACCCCC CTTTTACTAC 3300 CCTGCTACCA TGCTTAGCAC CCTCAGGATC TGCCCTAGGC CCTCTTCCCA 3350 | var(3350):[T:0.04] CACAGCGGCT CCCTCTGCTG GGCATCTGGG GCATGGCCAG GATCTGAACT 3400 TGACCCTTTG ACCCTAGATA ACTGCAGCAG GAAAGGGTTC TGAGGGGTCA 3450 TCTTGGATAA AAAGGCTTTG ACTTCCTGAA GGAAATAAAG GAACATGAGC 3500 CATTTCTTTT TTTTTTTTTT TTGAGACGGT GTCTCGCTCT GGCGCCCAGG 3550 | REPEAT | var(3544):[A:0.03] | var(3549):[C:0.01] CTGGAGTGCA GTGGTGCAAT CTTGGTTCAC ATCATTCTCC TGCCTCAGCC 3600 TCCCAAGTAG CTGGGACTAC AGGCGCCTGC CACCACCCCA GCTAATTTTT 3650 | var(3625):[A:0.02] TGTATTTTTA GTAGACAGGG GGTTTCACCG TGTTAGCCAG GACGTTCTTG 3700 ATCTGATCCT GTGATCCGCC CGCCTTGGCC TCCCAAAGTG CTGGGATTAC 3750 AGGCCTGAGC CACCATGCCT GGCCGAACAT GAGCCATTTC AACCCAGTAA 3800 GAGCTTCTCC AAGGAGAGTT CATAATTGTT CCAATGTTAG GTAGTCTTTT 3850 CTGCAGTCCA ACCTCAGTGA CTTCCATTCT TGCTAAAGCT GCATTTTTCA 3900 | REPEAT TTTTTTCTTT TTTTGAGAGG GAGTCTTGCT CTGTCGCCCA GGCTGGATAG 3950 TGGCACTATC TTGGCTCACT TCAACCTCCA CCTCCGGGGT TCAAGCAGTT 4000 CTCCTGCCTC AGCCTCCCAA GTAGCTGGGA TTACAGGCAT TCACCACCAT 4050 | var(4020):[G:0.01] GCCCGGCTAA TTTTTGTATT TTTAGCAGAG ATGGGGTTTC ACCATGTTGT 4100 | var(4055):[A:0.18] | var(4085):[A:0.01] CCAGGCTGGT CTCGAACTCC TGACCTCAGG TGATCTGCCG CCTTGGCCTC 4150 CCATAGTGTT GGGATTATAG GTGTGAGCCA CCATTCCTGG CTTTAAGCTG 4200 CATTTTTCTT GCAACAACTG TATCATAACT TTGCAGGAAG CTTCCCGTGA 4250 TTTGTGGCAA CTTTGTTTCC TTGTTACTAC CTCACTGCGA CTTTCAGAAG 4300 AATCCAGCTT GGTCCTGAGA GAGTGTTGGT TTCTCTTCCT TAGTCTGTCT 4350 | var(4312):[T:0.18] CCAAATCTCT TTGTGTCTTT CCTTGCAGGG TCTGAATGCT CCAAGTGAGC 4400 | Exon 3 G L N A P S E 45 CATCATTTGA GCCCCAAGCC CCAGCTCCAT ACCTTGGACC TCCACCACCC 4450 P S F E P Q A P A P Y L G P P P P 62 ACAACTTACT GCCCCTGCTC AATCCACCCA GATTCTGGCT TCCCACTTCC 4500 T T Y C P C S I H P D S G F P L P 79 TCCACCACCT TATGAGCTCC CAGCATCCAC ATCCCATGTC CCAGATCCCC 4550 P P P Y E L P A S T S H V P D P 95 CATACTCCTA TGGCAACATG GCCATACCAG TCTCCAAGCC ACTGAGCCTC 4600 P Y S Y G N M A I P V S K P L S L 112 TCAGGCCTGC TCAGTGAGCC GCTCCAAGAC CCCTTAGCCC TCCTGGACAT 4650 S G L L S E P L Q D P L A L L D I 129 TGGGCTGCCA GCAGGGCCAC CTAAGCCCCA AGAAGACCCA GAATCCGACT 4700 G L P A G P P K P Q E D P E S D 145 CAGGATTATC CCTCAACTAT AGCGATGCTG AATCTCTTGA GCTGGAGGGG 4750 S G L S L N Y S D A E S L E L E G 162 ACAGAGGCTG GTCGGCGGCG CAGCGAATAT GTAGAGATGT ACCCAGTGGA 4800 T E A G R R R S E Y V E M Y P V E 179 GTACCCCTAC TCACTCATGC CCAACTCCTT GGCCCACTCC AACTATACCT 4850 Y P Y S L M P N S L A H S N Y T 195 TGCCAGCTGC TGAGACCCCC TTGGCCTTAG AGCCCTCCTC AGGCCCTGTG 4900 L P A A E T P L A L E P S S G P V 212 CGGGCTAAGC CCACTGCACG GGGGGAGGCA GGGAGTCGGG ATGAACGTCG 4950 R A K P T A R G E A G S R D E R R 229 GGCCTTGGCC ATGAAGATTC CTTTTCCTAC GGACAAGATT GTCAACTTGC 5000 A L A M K I P F P T D K I V N L 245 CGGTAGATGA CTTTAATGAG CTATTGGCAA GGTACCCGCT GACAGAGAGC 5050 P V D D F N E L L A R Y P L T E S 262 CAGCTAGCGC TAGTCCGGGA CATCCGACGA CGGGGCAAAA ACAAGGTGGC 5100 Q L A L V R D I R R R G K N K V A 279 AGCCCAGAAC TGCCGCAAGA GGAAGCTGGA AACCATTGTG CAGCTGGAGC 5150 A Q N C R K R K L E T I V Q L E 295 GGGAGCTGGA GCGGCTGACC AATGAACGGG AGCGGCTTCT CAGGGCCCGC 5200 R E L E R L T N E R E R L L R A R 312 GGGGAGGCAG ACCGGACCCT GGAGGTCATG CGCCAACAGC TGACAGAGCT 5250 G E A D R T L E V M R Q Q L T E L 329 GTACCGTGAC ATTTTCCAGC ACCTTCGGGA TGAATCAGGC AACAGCTACT 5300 Y R D I F Q H L R D E S G N S Y 345 CTCCTGAAGA GTACGCGCTG CAACAGGCTG CCGATGGGAC CATCTTCCTT 5350 S P E E Y A L Q Q A A D G T I F L 362 GTGCCCCGGG GGACCAAGAT GGAGGCCACA GACTGAGCTG GCCCAGAGGG 5400 | UTR | var(5390):[A:0.01] | var(5397):[:0.04] V P R G T K M E A T D 373 GTGGAACTGC TGATGGGATT TCCTTCATTC CCTTCTGATA AAGGTACTCC 5450 CCAACCCTGA GTCCCAGAAG GAGCTGAGTT CTCTAGACCA GAAGAGGATG 5500 ACAATGGCAA CAAGTGTTTG GAAGTTCCAA GGTGTGTTCA AAGAGGCTTG 5550 CCTTGAGGGA GGGCTGGAAT CTGTCTTCCC TGACTCGGCT CCTCAGGTCT 5600 TTAGCCTCCA CCTTGTCTAA GCTTTGGTCT ATAAAGTGCG CTACAGAAAT 5650 GGCTTTTCAC TGTGTCTTCC TTCTTGAGGG AGGGTGGAAG CTGAGATAAT 5700 | var(5664):[A:0.05] TATCTGTTTG AATCTTACCA AGTTCACTTC ATTCTCCCCA GAGCTCTGTA 5750 TGAGAGGTAC CATAAAATTT GGGCTTGAGG CTGAGCATGG TGGCTCACAC 5800 | REPEAT CTGTAATCCC AGCACTTCGG GAGGCCGAGA TGGGCAGATC ACAAGGTCAG 5850 GAGTTCGAGA CCAACCTGGC CAAAATGGTG AAACCCCATT TCTACTAAAA 5900 GTACAAAAAT TAGCTGGGTG TGGTGGTGCA CGCCTGTAAT CCCAGTTCCT 5950 | var(5932):[C:0.02] CAGGAGGCTG AGGCAGGAGA ATCACTGGAA TCCGGGAGGT AGAGGTTGCA 6000 GTGAGCTGAG ATTGCGCCAC TGCACTCTAG CCTGGGTGAC AGAGCGAGAC 6050 TCCATCTACA AAAAAAAAAA AAAAAATCTG GGCTTGAGCA GTATGGGGAT 6100 CTACCACCTT CACCTCCTTT TCAGAGTCAG AGGCCATGGA TGATCTGAAG 6150 AACCCCACAC TCCCTGGTGG TGCCCTATTT GTAGAGCTTG GAGAGCTGTC 6200 CAAACTGACT AGACACCCTG TGCAAAGGTT CCTGATGTTT ACGTCTCTTT 6250 TCTCTCAATT CTCCCAGCAC AAAAAAGCCC AGGATGCCCA TAGGCCTTTC 6300 | var(6251):[C:0.01] TTTTTTTCTT CCCCTCCTGC TTACCTCTCA GCCTGGGTCC TCCTAATGTG 6350 CCAGAGTTCT CTCAGAAGAC TGAATGGGCT GTTCTTGGCT GGAATTTATA 6400 CATCAAAATT TCAGAAGATT TCACACCGAA GCTTTGGTAA AACCTGCTCC 6450 ACAGTGGAGT AAACTATTTA TTCCTGTGAA ACGTTTTCTC TGATTATGTT 6500 AGACAAACAC TACCCAGATC TTTTTTTTTT CTTTTTTCTT TTTTTTGAAA 6550 | REPEAT GAGAGTTTTG CTCTTGTTGC CCAGGCTGGA GTGCAATGGC ACGATCTTGG 6600 | var(6589):[A:0.17] CTCACCGCGA CCTCCACCTC CTGGGTTCAA GTGATTCTCC TGCCTCAGCC 6650 TTCGGAGAAG CTGGGATTAC AGACATGCAC CACCATGCCC ATCTAATTTT 6700 GTATTTTTAG TAGAGACAGG GGTTTCTCCA TGTTGGTCAG GCTGGTCTTG 6750 AACTCCTGAC CTCAGGTGAT CCATCCGCCT CAGCCTCCTA AAGTGCCGGG 6800 | var(6757):[C:0.02] | var(6776):[T:0.02] ATTACAGGAG TGAGCCACCG TGCCCGGCCA ACACTACCCA ATTCTTGTTT 6850 TGGGGCCCTC CTTTTCTAGA TCCTTAAAGA TTTTTTTGTT TGTTTTCTTT 6900 | REPEAT GAGACGGAGT TTCGCTCTTG TTGCCCATGC TGGAGTACAA TGGCGTGATC 6950 | NOT SCANNED TCAGCTCATC ACAACCTCTT TCTCCCGGGT TCAAGTGATT CTCCTGCCTC 7000 AGTCTCCCAA GTAGCTGGGA TTACAGGCAT CCACCACTAT GCCCAGCTAA 7050 TTTTGCATTT TTAGTAGAGA TGGGGTTTCT CCATGTTGGC CAAGCTGGTT 7100 TTGAACTCCC GACCTCAGGT GATCTGCCTG CCTCAGCCTC CCAAAGTGCT 7150 GGGATTACAG GCTTGAGCCA CCACGCCTGG CTTTTTTTTT TTTTTTGAGA 7200 | REPEAT CAGAGTCTCG CTCTGTCGCC TAGGCTAGAG TGCAGTGGCG CGATCTCAGC 7250 TCATTGCAAC CTCAACCTCC ACCTTCTCTG CCTCAGCCTC CTGAGTAACT 7300 GGGATTACAG GCGCCCGCCA CCATGCCTGG CTATTGTTTT GTATTTTTAG 7350 TAGAGATGGG TTTCACCATG TTGGCCAGGC TAGTTTCGAA CTCCTGACCT 7400 CAAATGATCT GCCTGCCTCG GCCTCCCAAA GTGTTGGGAT TACAGGCGTG 7450 AGCCACTGTG CGCAGCCTAG ATATTTTTTA TTAGTCTATT TTGCTTCTTC 7500 TTGAAACAGA ATATAATTCA CTAAGTTTCA GATTCCTTAC CCATATCAGT 7550 TAAAGTCCAG TCAAACCTCC CTGACAGGAC ACAATCTCCT TGCTTGGAGT 7600 TGTATAGTCT CCAGTATTCC CAGTCACTGA ATTACACAGC TTACCTTTT