Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000372 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000463 00000 ------------ A 0.57 0.57 0.57 G 0.43 0.43 0.43 0000 --- --- --- --- 000544 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 000668 00000 ------------ C 0.96 0.87 0.91 G 0.04 0.13 0.09 0000 --- --- --- --- 001303 00000 ------------ A 0.75 0.57 0.66 G 0.25 0.43 0.34 0000 --- --- --- --- 001362 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001589 00000 ------------ A 0.45 0.58 0.51 G 0.55 0.42 0.49 0000 --- --- --- --- 001685 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001758 00000 ------------ C 1.00 0.94 0.97 G 0.00 0.06 0.03 0000 --- --- --- --- 002637 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002672 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 002959 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003014 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 003048 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003550 00000 ------------ T 1.00 0.73 0.86 C 0.00 0.27 0.14 0000 --- --- --- --- 003628 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003687 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003779 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003905 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003996 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004021 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004257 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004606 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004965 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005032 00000 ------------ C 0.57 0.59 0.58 G 0.43 0.41 0.42 0000 --- --- --- --- 005634 00000 ------------ A 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 005724 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005737 00000 ------------ G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 005872 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006181 00000 ------------ T 0.89 0.89 0.89 G 0.11 0.11 0.11 0000 --- --- --- --- 006254 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006300 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006391 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 006393 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006420 00000 ------------ T 0.94 0.93 0.94 G 0.06 0.07 0.06 0000 --- --- --- --- 006426 00000 ------------ G 0.54 0.57 0.55 A 0.46 0.43 0.45 0000 --- --- --- --- 006564 00000 ------------ T 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 006600 00000 ------------ A 0.85 0.83 0.84 G 0.15 0.17 0.16 0000 --- --- --- --- 006993 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 007644 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007669 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007756 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007828 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007865 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007907 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007925 00000 ------------ T 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 008002 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008084 00000 ------------ G 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 008203 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 008310 00000 ------------ A 0.83 0.61 0.72 G 0.17 0.39 0.28 0000 --- --- --- --- 008393 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 008455 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008693 00000 ------------ - 0.16 0.00 0.09 + 0.84 1.00 0.91 0000 --- --- --- --- 008849 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 009014 00000 ------------ G 0.56 0.57 0.57 T 0.44 0.43 0.43 0000 --- --- --- --- 009620 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009643 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 009717 00000 ------------ - 0.46 0.43 0.45 + 0.54 0.57 0.55 0000 --- --- --- --- 009731 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009751 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 009975 00000 ------------ G 0.54 0.57 0.55 T 0.46 0.43 0.45 0000 --- --- --- --- 010046 00000 ------------ C 0.56 0.57 0.56 T 0.44 0.43 0.44 0000 --- --- --- --- 010475 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 010885 00000 ------------ C 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 010951 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 011247 00000 ------------ A 0.98 0.83 0.90 G 0.02 0.17 0.10 0000 --- --- --- --- 012104 00000 ------------ G 0.55 0.55 0.55 A 0.45 0.45 0.45 0000 --- --- --- --- 012455 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 012501 00000 ------------ G 0.90 0.87 0.88 A 0.10 0.13 0.12 0000 --- --- --- --- 012592 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012752 00000 ------------ G 0.81 1.00 0.89 A 0.19 0.00 0.11 0000 --- --- --- --- 012861 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012889 00000 ------------ C 1.00 0.82 0.92 G 0.00 0.18 0.08 0000 --- --- --- --- 013281 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 013284 00000 ------------ C 1.00 0.67 0.84 T 0.00 0.33 0.16 0000 --- --- --- --- 013978 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014010 00000 ------------ G 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 014292 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014626 00000 ------------ T 0.57 0.57 0.57 C 0.43 0.43 0.43 0000 --- --- --- --- 014634 00000 ------------ C 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 014777 00000 ------------ - 0.00 0.25 0.12 + 1.00 0.75 0.88 0000 --- --- --- --- 014954 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015107 00000 ------------ A 0.59 0.57 0.58 C 0.41 0.43 0.42 0000 --- --- --- --- 016004 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016406 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016424 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016444 00000 ------------ G 0.77 0.57 0.67 T 0.23 0.43 0.33 0000 --- --- --- --- 016465 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016878 00952 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0266 GAC AAC ASP(D) ASN(N) 017080 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 017087 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017183 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017251 00000 ------------ T 1.00 0.78 0.89 A 0.00 0.22 0.11 0000 --- --- --- --- 017314 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017323 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017526 01062 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0302 TCG TCA SER(S) SER(S) 017589 00000 ------------ T 0.83 0.83 0.83 G 0.17 0.17 0.17 0000 --- --- --- --- 017937 00000 ------------ G 0.54 0.57 0.55 A 0.46 0.43 0.45 0000 --- --- --- --- 018116 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 018139 00000 ------------ T 0.56 0.52 0.54 C 0.44 0.48 0.46 0000 --- --- --- --- 018325 00000 ------------ G 0.54 0.55 0.55 A 0.46 0.45 0.45 0000 --- --- --- --- 018696 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 018924 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 019556 00000 ------------ T 0.81 0.83 0.82 C 0.19 0.17 0.18 0000 --- --- --- --- 019562 00000 ------------ G 1.00 0.95 0.97 C 0.00 0.05 0.03 0000 --- --- --- --- 020088 01127 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0324 CCA CTA PRO(P) LEU(L) 027144 00000 ------------ C 0.91 0.96 0.93 T 0.09 0.04 0.07 0000 --- --- --- --- 027328 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 027384 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 027511 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027609 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027852 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027911 00000 ------------ A 0.53 0.57 0.55 G 0.47 0.43 0.45 0000 --- --- --- --- 028122 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 029566 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029597 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 029642 00000 ------------ C 0.55 0.57 0.56 T 0.45 0.43 0.44 0000 --- --- --- --- 029887 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 030647 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 030783 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 030826 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030875 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031008 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 031422 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031680 00000 ------------ - 0.11 0.36 0.23 + 0.89 0.64 0.77 0000 --- --- --- --- 032125 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032126 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 032221 00000 ------------ A 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 032282 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 032691 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 032957 00000 ------------ G 0.75 0.57 0.66 A 0.25 0.43 0.34 0000 --- --- --- --- 033193 00000 ------------ G 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 033645 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033891 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 033953 00000 ------------ T 0.83 0.61 0.72 C 0.17 0.39 0.28 0000 --- --- --- --- 034035 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 034492 00000 ------------ G 0.89 0.90 0.90 C 0.11 0.10 0.10 0000 --- --- --- --- 034563 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034844 01214 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0353 GCC GTC ALA(A) VAL(V) 034997 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035468 00000 ------------ T 1.00 0.83 0.91 C 0.00 0.17 0.09 0000 --- --- --- --- 036023 00000 ------------ G 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 036057 00000 ------------ A 1.00 0.94 0.97 G 0.00 0.06 0.03 0000 --- --- --- --- 036063 00000 ------------ G 0.70 0.50 0.62 A 0.30 0.50 0.38 0000 --- --- --- --- 036502 00000 ------------ G 0.83 0.79 0.82 T 0.17 0.21 0.18 0000 --- --- --- --- 036871 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037106 00000 ------------ C 0.83 0.83 0.83 T 0.17 0.17 0.17 0000 --- --- --- --- 037316 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037344 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 037456 00000 ------------ A 0.73 0.57 0.65 G 0.27 0.43 0.35 0000 --- --- --- --- 037896 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038130 00000 ------------ G 1.00 0.78 0.89 A 0.00 0.22 0.11 0000 --- --- --- --- 038668 00000 ------------ G 0.67 0.57 0.62 A 0.33 0.43 0.38 0000 --- --- --- --- 039497 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039986 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 040399 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040400 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041263 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 041825 00000 ------------ G 0.83 0.57 0.74 A 0.17 0.43 0.26 0000 --- --- --- --- 041991 00000 ------------ C 0.92 1.00 0.95 T 0.08 0.00 0.05 0000 --- --- --- --- 042250 00000 ------------ C 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 042791 00000 ------------ G 1.00 0.78 0.89 A 0.00 0.22 0.11 0000 --- --- --- --- 042887 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042951 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 043723 01838 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 044117 02232 3' UTR T 0.54 0.57 0.55 C 0.46 0.43 0.45 0000 --- --- --- --- 044138 02253 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 044655 02770 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 045095 03210 3' UTR T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 046343 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 046403 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 046532 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 046566 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 046777 00000 ------------ C 0.88 0.96 0.91 G 0.12 0.04 0.09 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007756: C 008693: CTCT 009717: A 014777: A 027384: G 028122: A 031008: T 031680: TT 046343: T