Site CDNA-Pos Description Allele1 AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000159 00000 ------------ - 0.27 0.70 0.62 0.28 0.46 + 0.73 0.30 0.38 0.72 0.54 0000 --- --- --- --- 000533 00000 ------------ G 0.98 1.00 1.00 1.00 0.99 A 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000583 00000 ------------ C 1.00 1.00 1.00 0.96 0.99 G 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 000690 00000 ------------ - 0.98 1.00 1.00 1.00 0.99 + 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000908 00006 5' UTR T 0.74 0.28 0.38 0.74 0.54 C 0.26 0.72 0.62 0.26 0.46 0000 --- --- --- --- 001343 00000 ------------ T 0.66 0.30 0.29 0.71 0.51 C 0.34 0.70 0.71 0.29 0.49 0000 --- --- --- --- 001443 00000 ------------ G 0.98 1.00 0.98 1.00 0.99 C 0.02 0.00 0.02 0.00 0.01 0000 --- --- --- --- 001598 00000 ------------ A 0.69 0.30 0.36 0.73 0.53 T 0.31 0.70 0.64 0.27 0.47 0000 --- --- --- --- 001636 00059 5' UTR G 0.69 0.30 0.36 0.73 0.53 T 0.31 0.70 0.64 0.27 0.47 0000 --- --- --- --- 002087 00000 ------------ T 0.67 0.28 0.34 0.74 0.52 C 0.33 0.72 0.66 0.26 0.48 0000 --- --- --- --- 002128 00000 ------------ A 0.65 0.28 0.35 0.75 0.51 G 0.35 0.72 0.65 0.25 0.49 0000 --- --- --- --- 002888 00000 ------------ C 0.98 1.00 1.00 1.00 0.99 T 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 010279 00000 ------------ C 0.90 0.31 0.41 0.73 0.58 T 0.10 0.69 0.59 0.27 0.42 0000 --- --- --- --- 010349 00000 ------------ C 0.98 1.00 1.00 1.00 0.99 G 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 010508 00000 ------------ G 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 010592 00000 ------------ T 0.98 1.00 0.98 1.00 0.99 C 0.02 0.00 0.02 0.00 0.01 0000 --- --- --- --- 010816 00000 ------------ A 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 010950 00000 ------------ G 0.91 0.31 0.41 0.73 0.59 A 0.09 0.69 0.59 0.27 0.41 0000 --- --- --- --- 011160 00000 ------------ T 0.91 0.81 0.66 0.27 0.66 C 0.09 0.19 0.34 0.73 0.34 0000 --- --- --- --- 011177 00000 ------------ A 0.87 1.00 1.00 1.00 0.97 T 0.13 0.00 0.00 0.00 0.03 0000 --- --- --- --- 011336 00110 5' UTR C 0.91 0.31 0.39 0.73 0.58 T 0.09 0.69 0.61 0.27 0.42 0000 --- --- --- --- 011360 00134 5' UTR G 0.35 0.88 0.95 1.00 0.80 A 0.65 0.12 0.05 0.00 0.20 0000 --- --- --- --- 011600 00000 ------------ G 1.00 0.96 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.01 0000 --- --- --- --- 011905 00000 ------------ C 0.98 1.00 1.00 1.00 0.99 T 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 012115 00000 ------------ G 0.90 0.31 0.40 0.73 0.59 T 0.10 0.69 0.60 0.27 0.41 0000 --- --- --- --- 013214 00000 ------------ T 0.96 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013301 00000 ------------ G 0.35 0.87 0.95 1.00 0.79 A 0.65 0.13 0.05 0.00 0.21 0000 --- --- --- --- 029861 00000 ------------ - 0.15 0.67 0.65 0.30 0.42 + 0.85 0.33 0.35 0.70 0.58 0000 --- --- --- --- 029878 00000 ------------ G 0.33 0.85 0.93 1.00 0.77 C 0.67 0.15 0.07 0.00 0.23 0000 --- --- --- --- 029889 00000 ------------ C 0.33 0.88 0.93 1.00 0.78 G 0.67 0.12 0.07 0.00 0.22 0000 --- --- --- --- 029893 00000 ------------ G 0.33 0.87 0.93 1.00 0.77 C 0.67 0.13 0.07 0.00 0.23 0000 --- --- --- --- 029908 00000 ------------ A 0.96 0.80 0.68 0.28 0.68 C 0.04 0.20 0.33 0.72 0.32 0000 --- --- --- --- 029923 00000 ------------ T 0.98 1.00 0.97 0.96 0.98 C 0.02 0.00 0.03 0.04 0.02 0000 --- --- --- --- 029992 00000 ------------ A 0.98 1.00 0.95 1.00 0.98 C 0.02 0.00 0.05 0.00 0.02 0000 --- --- --- --- 030011 00000 ------------ T 0.98 1.00 0.98 1.00 0.99 C 0.02 0.00 0.02 0.00 0.01 0000 --- --- --- --- 030054 00000 ------------ T 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 030468 00269 NON-SYN C 0.98 1.00 0.97 1.00 0.99 A 0.02 0.00 0.03 0.00 0.01 0033 GAC GAA ASP(D) GLU(E) 031066 00000 ------------ T 0.98 1.00 1.00 1.00 0.99 C 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 031113 00000 ------------ A 0.98 1.00 0.98 1.00 0.99 C 0.02 0.00 0.02 0.00 0.01 0000 --- --- --- --- 031437 00000 ------------ G 0.27 0.88 0.95 1.00 0.76 C 0.73 0.12 0.05 0.00 0.24 0000 --- --- --- --- 031444 00000 ------------ T 1.00 0.98 1.00 1.00 0.99 C 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 031465 00000 ------------ G 0.96 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 031522 00000 ------------ C 0.98 1.00 0.98 1.00 0.99 T 0.02 0.00 0.02 0.00 0.01 0000 --- --- --- --- 031841 00000 ------------ T 0.96 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 031928 00000 ------------ T 0.78 0.30 0.45 0.76 0.57 C 0.22 0.70 0.55 0.24 0.43 0000 --- --- --- --- 031930 00000 ------------ A 0.96 0.83 0.61 0.24 0.68 C 0.04 0.17 0.39 0.76 0.32 0000 --- --- --- --- 031957 00000 ------------ C 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 032256 00000 ------------ A 0.98 0.84 0.64 0.33 0.71 G 0.02 0.16 0.36 0.68 0.29 0000 --- --- --- --- 039764 00000 ------------ G 0.68 0.80 0.48 0.39 0.58 A 0.32 0.20 0.52 0.61 0.42 0000 --- --- --- --- 040074 00000 ------------ G 1.00 0.97 1.00 1.00 0.99 A 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 040169 00000 ------------ G 0.94 1.00 1.00 1.00 0.99 A 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 040536 00000 ------------ G 0.98 1.00 1.00 1.00 0.99 C 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 040709 00000 ------------ G 0.93 1.00 1.00 1.00 0.98 A 0.07 0.00 0.00 0.00 0.02 0000 --- --- --- --- 040815 00000 ------------ C 0.70 0.89 0.98 1.00 0.90 G 0.30 0.11 0.02 0.00 0.10 0000 --- --- --- --- 040875 00000 ------------ - 0.07 0.00 0.00 0.00 0.02 + 0.93 1.00 1.00 1.00 0.98 0000 --- --- --- --- 040955 00717 3' UTR T 0.97 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.01 0000 --- --- --- --- 040998 00760 3' UTR G 0.97 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.01 0000 --- --- --- --- 041121 00883 3' UTR T 1.00 1.00 0.97 1.00 0.99 C 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 041405 01167 3' UTR C 0.94 1.00 1.00 1.00 0.98 G 0.06 0.00 0.00 0.00 0.02 0000 --- --- --- --- 041912 01674 3' UTR C 1.00 1.00 0.97 0.98 0.99 T 0.00 0.00 0.03 0.02 0.01 0000 --- --- --- --- 041956 01718 3' UTR T 1.00 1.00 0.97 1.00 0.99 G 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 042182 01944 3' UTR T 1.00 0.98 1.00 1.00 0.99 C 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 042191 01953 3' UTR G 0.98 1.00 0.98 1.00 0.99 A 0.02 0.00 0.02 0.00 0.01 0000 --- --- --- --- 042195 01957 3' UTR A 0.98 1.00 0.98 1.00 0.99 G 0.02 0.00 0.02 0.00 0.01 0000 --- --- --- --- 042676 02438 3' UTR A 1.00 1.00 0.89 1.00 0.97 G 0.00 0.00 0.11 0.00 0.03 0000 --- --- --- --- 042870 00000 ------------ - 0.75 0.90 0.98 0.98 0.90 + 0.25 0.10 0.02 0.02 0.10 0000 --- --- --- --- 042889 00000 ------------ C 1.00 0.98 1.00 1.00 0.99 T 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 043285 00000 ------------ G 0.98 1.00 1.00 1.00 0.99 C 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 043473 00000 ------------ A 1.00 0.96 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.01 0000 --- --- --- --- 043515 00000 ------------ G 0.93 1.00 1.00 1.00 0.98 C 0.07 0.00 0.00 0.00 0.02 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000159: GT 000690: AGT 029861: A 040875: T 042870: TGAT