************************************************************* **** **** **** Output from PHASE v2.0 **** **** Code by M Stephens, with contributions from N Li **** **** **** ************************************************************* BEGIN COMMAND_LINE /usr/local/genome/lib/phase/PHASE2 -d1 lepxx.phase.inp lepxx.phase.out END COMMAND_LINE BEGIN OUTFILE_LIST lepxx.phase.out_freqs : haplotype frequency estimates lepxx.phase.out_pairs : most likely haplotype pairs for each individual lepxx.phase.out_recom : estimates of recombination parameters lepxx.phase.out_monitor : file for monitoring convergence END OUTFILE_LIST BEGIN INPUT_SUMMARY Number of Individuals: 47 Number of Loci: 31 Positions of loci: 114 178 614 2020 2522 2745 5064 7214 7280 7704 7743 8337 10120 10268 10737 10826 10891 11762 12115 12291 13655 13878 14559 14693 14743 14915 14980 15267 15891 17744 17901 END INPUT_SUMMARY List of haplotypes found in best reconstruction, with counts. (See file lepxx.phase.out_freqs for haplotype population frequency estimates) BEGIN LIST_SUMMARY 1 CCAGGGCGCTTCGCTGGGGGTTGTGGGGTCG 2.000000 2 CCAGGGCGCTTCGCTAGGGGTAATGGGGGCG 2.000000 3 CCAGGGCGCTTCGCTAGGGGTAATGGGGGCA 4.000000 4 CCAGGGCGCTTCGCTAGGGGCAATGGGGGCA 1.000000 5 CCAGGGTGCCTCGCTGGGGGTTGTGGGGGCG 2.000000 6 CCAGGGTGCCTCGCTAGGGGTAGTGGGGGCG 1.000000 7 CCAGGGTGCCTCGTTGGGGGTTGTGGGGTCG 2.000000 8 CCAGGGTCCCTTGCTGAGGGTTGAAAGGGCG 10.000000 9 CCAGACTGCCTCGTTGGGGGTTGTGGGGTCG 1.000000 10 CCAGACTGCCTCATTGGGGTTTGTGGGATCA 2.000000 11 CCAGACTGTCTCGCCGGAAGTTGTGGGGGCG 1.000000 12 CCAGACTGTCGCGCTGGGGGTTGTGGAGGAG 10.000000 13 CCAGACTGTCGCGCTGGGGGCTGTGGAGGCG 1.000000 14 CCAGACTGTCGCGCTGGGGGCTGTGGAGGAG 6.000000 15 CCAGACTGTCGCGCCGGGGGTTGTGGAGGAG 1.000000 16 CCAAGGTGCCTCGTTGGGGGTTGTGGGGTCG 3.000000 17 CCAAGGTGCCTCATTGGGGTTTGTGGGATCG 1.000000 18 CCAAGGTGCCTCATTGGGGTTTGTGGGATCA 4.000000 19 CCAAGGTGTCTCGCTGGGGGTTGTGGAGGCG 5.000000 20 CCGGGGCGCCTCGTTGGGGGTTGTGGGGGAG 2.000000 21 CCGGGGTGCCTCGCCGGAAGTTGTGGGGGCG 1.000000 22 CCGGACTGCCGCGCCGGGGGCTGTGGGGGCG 1.000000 23 CCGGACTGCCGCGCCGGGGGCTGTGGGGGAG 6.000000 24 CCGAGGTGCCTCGCCGGAAGTTGTGGGGGCG 13.000000 25 CCGAGGTGCCTCGCCGGAAGTTGTGGGGGAG 1.000000 26 CTGAGGTGCCTCGCCGGAAGTTGTGGGGGCG 6.000000 27 TCAGACTGTCGCGCTGGGGGTTGTGGAGGAG 5.000000 END LIST_SUMMARY Summary of best reconstruction (numbers refer to the list of haplotypes given above) BEGIN BESTPAIRS_SUMMARY DY01: (1,7) DY02: (10,19) DY03: (24,24) DY04: (3,18) DY05: (3,7) DY06: (1,25) DY07: (2,18) DY08: (5,8) DY09: (16,20) DY10: (8,24) DY11: (16,17) DY12: (10,19) DY13: (8,20) DY14: (3,4) DY15: (8,24) DY16: (9,16) DY17: (8,18) DY18: (8,18) DY19: (5,19) DY20: (6,8) DY21: (3,19) DY22: (8,24) DY23: (19,24) DY24: (8,8) E101: (14,26) E102: (23,27) E103: (12,24) E104: (27,27) E105: (14,24) E106: (12,12) E107: (12,23) E108: (24,27) E109: (12,12) E110: (2,24) E111: (12,14) E112: (11,14) E113: (15,23) E114: (12,23) E115: (23,26) E116: (24,26) E117: (13,14) E118: (22,26) E119: (14,26) E120: (24,27) E121: (12,21) E122: (12,26) E123: (23,24) END BESTPAIRS_SUMMARY Haplotype estimates for each individual, with uncertain phases enclosed in () and uncertain genotypes enclosed in []: BEGIN BESTPAIRS1 0 DY01 C C A G G G C G C T T C G C T G G G G G T T G T G G G G T C G C C A G G G T G C C T C G T T G G G G G T T G T G G G G T C G 0 DY02 C C A (G) (A) (C) T G C C T C A T T G G G G T T T G T G G G A T C A C C A (A) (G) (G) T G T C T C G C T G G G G G T T G T G G A G G C G 0 DY03 C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 DY04 C C A G G G C G C T T C G C T A G G G G T A A T G G G G G C [A] C C A A G G T G C C T C A T T G G G G T T T G T G G G A T C [A] 0 DY05 C C A G G G C G C T T C G C T A G G G G T A A T G G G G G C A C C A G G G T G C C T C G T T G G G G G T T G T G G G G T C G 0 DY06 C C A G G G C G C T T C G C T G G G G G T T G T G G G G T (C) G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G (A) G 0 DY07 C C A G G G C G C T T C G C T A G G G G T A A T G G G G G C (G) C C A A G G T G C C T C A T T G G G G T T T G T G G G A T C (A) 0 DY08 C C A G G G T G C C T C G C T G G G G G T T G T G G G G G C G C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G 0 DY09 C C A A G G T G C C T C G T T G G G G G T T G T G G G G T C G C C G G G G C G C C T C G T T G G G G G T T G T G G G G G A G 0 DY10 C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 DY11 C C A A G G T G C C T C G T T G G G G G T T G T G G G G T C G C C A A G G T G C C T C A T T G G G G T T T G T G G G A T C G 0 DY12 C C A (G) (A) (C) T G C C T C A T T G G G G T T T G T G G G A T C A C C A (A) (G) (G) T G T C T C G C T G G G G G T T G T G G A G G C G 0 DY13 C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G C C G G G G C G C C T C G T T G G G G G T T G T G G G G G A G 0 DY14 C C A G G G C G C T T C G C T A G G G G T A A T G G G G G C [A] C C A G G G C G C T T C G C T A G G G G C A A T G G G G G C [A] 0 DY15 C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 DY16 C C A G A C T G C C T C G T T G G G G G T T G T G G G G T C G C C A A G G T G C C T C G T T G G G G G T T G T G G G G T C G 0 DY17 C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G C C A A G G T G C C T C A T T G G G G T T T G T G G G A T C A 0 DY18 C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G C C A A G G T G C C T C A T T G G G G T T T G T G G G A T C A 0 DY19 C C A G G G T G C C T C G C T G G G G G T T G T G G G G G C G C C A A G G T G T C T C G C T G G G G G T T G T G G A G G C G 0 DY20 C C A G G G T G C C T C G C T A G G G G T A G T G G G G G C G C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G 0 DY21 C C A G G G C G C T T C G C T A G G G G T A A T G G G G G C A C C A A G G T G T C T C G C T G G G G G T T G T G G A G G C G 0 DY22 C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 DY23 C C A A G G T G T C T C G C T G G G G G T T G T G G A G G C G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 DY24 C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G C C A G G G T C C C T T G C T G A G G G T T G A A A G G G C G 0 E101 C C A G A C T G T C G C G C T G G G G G C T G T G G A G G A G C T G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E102 C C G G A C T G C C G C G C C G G G G G C T G T G G G G G A G T C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G 0 E103 C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E104 T C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G T C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G 0 E105 C C A G A C T G T C G C G C T G G G G G C T G T G G A G G A G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E106 C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G 0 E107 C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G C C G G A C T G C C G C G C C G G G G G C T G T G G G G G A G 0 E108 C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G T C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G 0 E109 C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G 0 E110 C C A G G G C G C T T C G C T A G G G G T A A T G G G G G C G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E111 C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G C C A G A C T G T C G C G C T G G G G G [C] T G T G G A G G A G 0 E112 C C A G A C T G T C T C G C C G G A A G T T G T G G G G G C G C C A G A C T G T C G C G C T G G G G G C T G T G G A G G A G 0 E113 C C A G A C T G T C G C G C C G G G G G T T G T G G A G G A G C C G G A C T G C C G C G C C G G G G G C T G T G G G G G A G 0 E114 C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G C C G G A C T G C C G C G C C G G G G G C T G T G G G G G A G 0 E115 C C G G A C T G C C G C G C C G G G G G C T G T G G G G G A G C T G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E116 C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G C T G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E117 C C A G A C T G T C G C G C T G G G G G C T G T G G A G G C G C C A G A C T G T C G C G C T G G G G G C T G T G G A G G A G 0 E118 C C G G A C T G C C G C G C C G G G G G C T G T G G G G G C G C T G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E119 C C A G A C T G T C G C G C T G G G G G C T G T G G A G G A G C T G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E120 C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G T C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G 0 E121 C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G C C G G G G [T] G C C T C G C C G G A A G T T G T G G G G G C G 0 E122 C C A G A C T G T C G C G C T G G G G G T T G T G G A G G A G C T G A G G T G C C T C G C C G G A A G T T G T G G G G G C G 0 E123 C C G G A C T G C C G C G C C G G G G G C T G T G G G G G A G C C G A G G T G C C T C G C C G G A A G T T G T G G G G G C G END BESTPAIRS1 Haplotype estimates for each individual, with uncertain phases enclosed in () and uncertain genotypes enclosed in [] with phase known positions indicated by = BEGIN BESTPAIRS2 0 DY01 = = = = = = C = = T = = = C = = = = ? ? = = = = = = = = = = = = = = = = = T = = C = = = T = = = = ? ? = = = = = = = = = = = 0 DY02 = = = (G) (A) (C) = = C = = = A T = = = = = T = = = = = = G A T = A = = = (A) (G) (G) = = T = = = G C = = = = = G = = = = = = A G G = G 0 DY03 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 DY04 = = = G = = C = = T = = G C = A = = = G = A A = = = = G G ? ? = = = A = = T = = C = = A T = G = = = T = T G = = = = A T ? ? 0 DY05 = = = = = = C = = T = = = C = A = = = = = A A = = = = = G = A = = = = = = T = = C = = = T = G = = = = = T G = = = = = T = G 0 DY06 = = A G = = C = = T = = = = T = = G G = = = = = = = = = T (C) = = = G A = = T = = C = = = = C = = A A = = = = = = = = = G (A) = 0 DY07 = = = G ? ? C = = T = = G C = A = = = G = A A = = = = G G = (G) = = = A ? ? T = = C = = A T = G = = = T = T G = = = = A T = (A) 0 DY08 = = = = = = = G = = = C = = = = G = = = = = = T G G = = = = = = = = = = = = C = = = T = = = = A = = = = = = A A A = = = = = 0 DY09 = = A A = = T = = = = = = = = = = = ? ? = = = = = = = = T C = = = G G = = C = = = = = = = = = = = ? ? = = = = = = = = G A = 0 DY10 = = A G = = = C = = = T = = T = A G G = = = = A A A = = = = = = = G A = = = G = = = C = = C = G A A = = = = T G G = = = = = 0 DY11 = = ? = = = = = = = = = G = = = = = = G = = = = = = = G = = = = = ? = = = = = = = = = A = = = = = = T = = = = = = = A = = = 0 DY12 = = = (G) (A) (C) = = C = = = A T = = = = = T = = = = = = G A T = A = = = (A) (G) (G) = = T = = = G C = = = = = G = = = = = = A G G = G 0 DY13 = = A = = = T C = = = T = C = = A = = = = = = A A A = = = C = = = G = = = C G = = = C = T = = G = = = = = = T G G = = = A = 0 DY14 = = = = = = = ? = ? ? = = = = = = = = = T = = = = = = = = ? ? = = = = = = = ? = ? ? = = = = = = = = = C = = = = = = = = ? ? 0 DY15 = = A ? = = = C = = = T = = T = A G G = = = = A A A = = = = = = = G ? = = = G = = = C = = C = G A A = = = = T G G = = = = = 0 DY16 = = = G A C ? = = ? ? = = = = = = = = = = = = = = = = = = = = = = = A G G ? = = ? ? = = = = = = = = = = = = = = = = = = = = 0 DY17 = = = G = = = C = = = T G C = = A = ? ? = = = A A A = G G = G = = = A = = = G = = = C A T = = G = ? ? = = = T G G = A T = A 0 DY18 = = = G = = = C = = = T G C = = A = = G = = = A A A = G G = G = = = A = = = G = = = C A T = = G = = T = = = T G G = A T = A 0 DY19 = = = G = = = = C = = = = = = = = = = = = = = = = = G = = = = = = = A = = = = T = = = = = = = = = = = = = = = = = A = = = = 0 DY20 = = = = = = = G = = = C = = = A G = = = = A = T G G = = = = = = = = = = = = C = = = T = = = G A = = = = T = A A A = = = = = 0 DY21 = = = G = = C = C T = = = = = A = = = = = A A = = = G = = = A = = = A = = T = T C = = = = = G = = = = = T G = = = A = = = G 0 DY22 = = A G = = = C = = = T = = T = A G G = = = = A A A = = = = = = = G A = = = G = = = C = = C = G A A = = = = T G G = = = = = 0 DY23 = = A = = = = = T = = = = = T = = G G = = = = = = = A = = = = = = G = = = = = C = = = = = C = = A A = = = = = = = G = = = = 0 DY24 = = = ? = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = ? = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 E101 = C A G A C = = T = G = = = T = = G ? ? C = = = = = A = = A = = T G A G G = = C = T = = = C = = A ? ? T = = = = = G = = C = 0 E102 C = G = = = = = C = = = = = C = = = = = C = = = = = G = = = = T = A = = = = = T = = = = = T = = = = = T = = = = = A = = = = 0 E103 = = A G A C ? = T = G = = = T = = G G = = = = = = = A = = A = = = G A G G ? = C = T = = = C = = A A = = = = = = = G = = C = 0 E104 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 E105 = = A G A C = = T = G = = = T = = G G = C = = = = = A = = A = = = G A G G = = C = T = = = C = = A A = T = = = = = G = = C = 0 E106 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 E107 = = A = = = = = T = = = = = T = = = = = T = = = = = A = = = = = = G = = = = = C = = = = = C = = = = = C = = = = = G = = = = 0 E108 C = G ? G G ? = C = T = = = C = = A A = = = = = = = G = = C = T = A ? A C ? = T = G = = = T = = G G = = = = = = = A = = A = 0 E109 = = = ? = = = = = = = = = = = = = = ? ? = = = = = = = = = = = = = = ? = = = = = = = = = = = = = = ? ? = = = = = = = = = = = 0 E110 = = A G = = C = = T = = = = T A = ? G = = A A = = = = = = = = = = G A = = T = = C = = = = C G = ? A = = T G = = = = = = = = 0 E111 = = = = = = = = = = = = = = = = = = = = ? = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = ? = = = = = = = = = = 0 E112 = = = = = = ? = = = T = = = C = = A A = T = = = = = G = = C = = = = = = = ? = = = G = = = T = = G G = C = = = = = A = = A = 0 E113 = = A = = = = = T = = = ? ? = = = = = = T = = = = = A = = = = = = G = = = = = C = = = ? ? = = = = = = C = = = = = G = = = = 0 E114 = = A ? = = = = T = = = = = T = = = = = T = = = = = A = = = = = = G ? = = = = C = = = = = C = = = = = C = = = = = G = = = = 0 E115 = C = G A C = = = = G = = = = = = G G = C = = = = = = = = A = = T = A G G = = = = T = = = = = = A A = T = = = = = = = = C = 0 E116 = C = ? = = ? ? ? ? ? = = = = = = = = = = = = = = = = = = = = = T = ? = = ? ? ? ? ? = = = = = = = = = = = = = = = = = = = = 0 E117 = = = = = = = = = = = = = = = = = = ? ? = = = = = = = ? = C = = = = = = = = = = = = = = = = = = = ? ? = = = = = = = ? = A = 0 E118 = C = G A C = = = = G = = = = = = G G = C = = = = = = = = = = = T = A G G = = = = T = = = = = = A A = T = = = = = = = = = = 0 E119 = C A G A C = = T = G = = = T = = G G = C = = = = = A = = A = = T G A G G = = C = T = = = C = = A A = T = = = = = G = = C = 0 E120 C = G A G G = = C = T = = = C = = A A = = = = = = = G = = C = T = A G A C = = T = G = = = T = = G G = = = = = = = A = = A = 0 E121 = = A = A C ? = T = G = = = ? ? ? G G = = = = = = = A = = A = = = G = G G ? = C = T = = = ? ? ? A A = = = = = = = G = = C = 0 E122 = C A G A C ? = T = G = = = T = = G G = = = = = = = A = = A = = T G A G G ? = C = T = = = C = = A A = = = = = = = G = = C = 0 E123 = = = G A C = = = = G = = = = = = G G = C = = = = = = = = A = = = = A G G = = = = T = = = = = = A A = T = = = = = = = = C = END BESTPAIRS2 Phase probabilities at each site with phase known positions indicated by = and missing data positions indicated by ? BEGIN PHASEPROBS = = = = = = 1.00 = = 1.00 = = = 1.00 = = = = ? ? = = = = = = = = = = = = = = 0.60 0.60 0.60 = = 1.00 = = = 1.00 1.00 = = = = = 1.00 = = = = = = 1.00 1.00 1.00 = 0.98 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 1.00 = = 1.00 = = 1.00 = = 1.00 1.00 = 1.00 = = = 1.00 = 1.00 1.00 = = = = 1.00 1.00 ? ? = = = = = = 1.00 = = 1.00 = = = 1.00 = 1.00 = = = = = 1.00 1.00 = = = = = 1.00 = 0.98 = = 1.00 1.00 = = 1.00 = = 1.00 = = = = 1.00 = = 1.00 1.00 = = = = = = = = = 1.00 0.61 = = = = 1.00 ? ? 1.00 = = 1.00 = = 1.00 1.00 = 1.00 = = = 1.00 = 1.00 1.00 = = = = 1.00 1.00 = 0.59 = = = = = = = 1.00 = = = 1.00 = = = = 1.00 = = = = = = 1.00 1.00 1.00 = = = = = = = 1.00 0.99 = = 1.00 = = = = = = = = = = = ? ? = = = = = = = = 1.00 1.00 = = = 1.00 1.00 = = = 1.00 = = = 1.00 = = 1.00 = 1.00 1.00 1.00 = = = = 1.00 1.00 1.00 = = = = = = = ? = = = = = = = = = 1.00 = = = = = = 1.00 = = = = = = = 1.00 = = = = = = 0.59 0.59 0.59 = = 1.00 = = = 1.00 1.00 = = = = = 1.00 = = = = = = 1.00 1.00 1.00 = 0.97 = = 0.99 = = = 1.00 1.00 = = = 1.00 = 1.00 = = 1.00 = = = = = = 1.00 1.00 1.00 = = = 1.00 = = = = = = = = ? = ? ? = = = = = = = = = 1.00 = = = = = = = = ? ? = = 1.00 ? = = = 1.00 = = = 1.00 = = 1.00 = 1.00 1.00 1.00 = = = = 1.00 1.00 1.00 = = = = = = = = 0.99 1.00 1.00 ? = = ? ? = = = = = = = = = = = = = = = = = = = = = = = 1.00 = = = 1.00 = = = 1.00 1.00 1.00 = = 1.00 = ? ? = = = 1.00 1.00 1.00 = 1.00 1.00 = 1.00 = = = 1.00 = = = 1.00 = = = 1.00 1.00 1.00 = = 1.00 = = 1.00 = = = 1.00 1.00 1.00 = 1.00 1.00 = 1.00 = = = 1.00 = = = = 1.00 = = = = = = = = = = = = = = = = = 1.00 = = = = = = = = = = = 1.00 = = = 1.00 = = = 1.00 1.00 = = = = 1.00 = 1.00 1.00 1.00 = = = = = = = = 1.00 = = 1.00 = 1.00 1.00 = = = = = 1.00 = = = = = 1.00 1.00 = = = 1.00 = = = 0.99 = = 1.00 1.00 = = = 1.00 = = = 1.00 = = 1.00 = 1.00 1.00 1.00 = = = = 1.00 1.00 1.00 = = = = = = = 1.00 = = = = = 1.00 = = = = = 1.00 = = 1.00 1.00 = = = = = = = 1.00 = = = = = = = ? = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0.99 1.00 1.00 1.00 1.00 = = 1.00 = 1.00 = = = 1.00 = = 1.00 ? ? 0.99 = = = = = 1.00 = = 0.99 = 0.99 = 1.00 = = = = = 1.00 = = = = = 1.00 = = = = = 1.00 = = = = = 1.00 = = = = = = 1.00 1.00 1.00 1.00 ? = 1.00 = 1.00 = = = 1.00 = = 1.00 1.00 = = = = = = = 1.00 = = 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 1.00 1.00 1.00 1.00 = = 1.00 = 1.00 = = = 1.00 = = 1.00 1.00 = 0.99 = = = = = 1.00 = = 0.98 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 1.00 = = = = = 1.00 = = = = = 1.00 = = = = = 1.00 = = = = = 1.00 = = = = 0.99 = 1.00 ? 1.00 1.00 ? = 1.00 = 1.00 = = = 1.00 = = 1.00 1.00 = = = = = = = 1.00 = = 1.00 = = = = ? = = = = = = = = = = = = = = ? ? = = = = = = = = = = = = = 1.00 0.99 = = 1.00 = = 1.00 = = = = 1.00 1.00 = ? 1.00 = = 1.00 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = = = = ? = = = = = = = = = = = = = = = = ? = = = 1.00 = = = 1.00 = = 1.00 1.00 = 0.99 = = = = = 1.00 = = 0.98 = = = 1.00 = = = = = 1.00 = = = ? ? = = = = = = 1.00 = = = = = 1.00 = = = = = = 1.00 ? = = = = 1.00 = = = = = 1.00 = = = = = 1.00 = = = = = 1.00 = = = = = 0.99 = 1.00 1.00 1.00 = = = = 1.00 = = = = = = 1.00 1.00 = 1.00 = = = = = = = = 0.99 = = 1.00 = ? = = ? ? ? ? ? = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = ? ? = = = = = = = ? = 1.00 = = 0.98 = 1.00 1.00 1.00 = = = = 1.00 = = = = = = 1.00 1.00 = 1.00 = = = = = = = = = = = 0.99 1.00 1.00 1.00 1.00 = = 1.00 = 1.00 = = = 1.00 = = 1.00 1.00 = 0.99 = = = = = 1.00 = = 0.99 = 0.99 = 1.00 1.00 1.00 1.00 = = 1.00 = 1.00 = = = 1.00 = = 1.00 1.00 = = = = = = = 1.00 = = 1.00 = = = 0.95 = 0.99 0.99 ? = 1.00 = 1.00 = = = ? ? ? 1.00 1.00 = = = = = = = 1.00 = = 1.00 = = 0.99 1.00 1.00 1.00 1.00 ? = 1.00 = 1.00 = = = 1.00 = = 1.00 1.00 = = = = = = = 1.00 = = 1.00 = = = = 1.00 1.00 1.00 = = = = 1.00 = = = = = = 1.00 1.00 = 1.00 = = = = = = = = 0.98 = END PHASEPROBS