Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000099 CC 0 0 0 CT 0 1 1 TT 10 3 13 0.000 0.082 0.019 000111 AA 3 0 3 AC 4 3 7 CC 3 1 4 0.400 1.440 0.000 001033 CC 21 12 33 CT 3 7 10 TT 0 4 4 0.107 2.175 4.601 001247 CC 4 6 10 CG 10 10 20 GG 10 7 17 0.296 0.381 0.790 001400 AA 0 0 0 AG 1 0 1 GG 23 22 45 0.011 0.000 0.006 001458 CC 11 14 25 CT 10 3 13 TT 3 2 5 0.094 4.281 2.244 002190 CC 10 7 17 CT 10 8 18 TT 3 8 11 0.040 2.112 1.911 002248 AA 1 0 1 AG 7 0 7 GG 14 23 37 0.011 0.000 0.830 002918 CC 1 1 2 CG 7 4 11 GG 16 18 34 0.044 1.252 0.763 005252 AA 14 15 29 AG 5 5 10 GG 3 1 4 3.414 0.429 3.803 005561 CC 0 1 1 CT 0 4 4 TT 15 15 30 0.000 0.930 2.567 006092 AA 0 0 0 AG 4 4 8 GG 17 16 33 0.233 0.247 0.479 006152 CC 18 20 38 CT 3 0 3 TT 0 0 0 0.124 0.000 0.059 006450 AA 23 21 44 AT 0 2 2 TT 0 0 0 0.000 0.048 0.023 006456 CC 14 20 34 CT 9 2 11 TT 0 0 0 1.361 0.050 0.872 006790 -- 0 1 1 +- 7 10 17 ++ 16 10 26 0.741 0.583 0.876 006845 GG 5 1 6 GT 11 12 23 TT 7 8 15 0.030 1.714 0.365 007021 GG 10 10 20 GT 14 9 23 TT 0 0 0 4.069 1.830 5.731 007086 AA 0 0 0 AG 1 0 1 GG 23 21 44 0.011 0.000 0.006 009244 AA 0 0 0 AG 0 1 1 GG 24 21 45 0.000 0.012 0.006 009314 CC 5 2 7 CT 12 13 25 TT 7 8 15 0.001 1.043 0.429 009482 AA 13 3 16 AT 8 10 18 TT 2 9 11 0.221 0.007 1.624 009554 CC 0 1 1 CT 1 3 4 TT 22 17 39 0.011 2.136 3.563 009632 GG 12 16 28 GT 9 4 13 TT 3 2 5 0.389 3.327 2.792 009696 CC 0 0 0 CT 0 1 1 TT 24 21 45 0.000 0.012 0.006 009779 AA 10 19 29 AC 13 2 15 CC 0 0 0 3.569 0.053 1.858 009800 AA 0 0 0 AG 0 3 3 GG 23 19 42 0.000 0.118 0.054 010060 CC 0 0 0 CT 2 0 2 TT 22 23 45 0.045 0.000 0.022 010127 AA 21 23 44 AG 2 0 2 GG 0 0 0 0.048 0.000 0.023 010164 CC 2 7 9 CT 8 13 21 TT 13 3 16 0.221 0.631 0.196 015028 AA 17 15 32 AG 3 4 7 GG 0 0 0 0.131 0.263 0.379 015392 AA 20 18 38 AG 0 1 1 GG 0 0 0 0.000 0.014 0.007 015691 CC 21 21 42 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 015966 AA 22 23 45 AG 2 0 2 GG 0 0 0 0.045 0.000 0.022 016703 CC 24 19 43 CT 0 3 3 TT 0 0 0 0.000 0.118 0.052 016753 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 021225 CC 15 20 35 CG 8 2 10 GG 0 0 0 1.019 0.050 0.703 021540 -- 11 18 29 +- 9 4 13 ++ 3 1 4 0.277 1.252 1.801 022061 AA 8 4 12 AG 6 7 13 GG 3 3 6 0.878 0.000 0.513 022850 CC 0 0 0 CT 1 0 1 TT 23 22 45 0.011 0.000 0.006 022911 AA 24 22 46 AG 0 1 1 GG 0 0 0 0.000 0.011 0.005 023078 AA 0 1 1 AC 8 10 18 CC 16 11 27 0.960 0.468 1.035 023109 AA 18 18 36 AT 6 4 10 TT 0 0 0 0.490 0.220 0.684 026741 AA 16 13 29 AG 6 7 13 GG 0 3 3 0.548 1.431 0.792 026805 AA 0 0 0 AG 1 3 4 GG 22 20 42 0.011 0.112 0.095 026937 CC 0 0 0 CT 4 0 4 TT 20 23 43 0.198 0.000 0.093 027043 CC 22 23 45 CG 2 0 2 GG 0 0 0 0.045 0.000 0.022 027064 AA 0 0 0 AG 2 0 2 GG 21 23 44 0.048 0.000 0.023 027138 CC 0 0 0 CT 3 0 3 TT 17 18 35 0.131 0.000 0.064 027419 AA 0 0 0 AG 1 0 1 GG 18 20 38 0.014 0.000 0.007 027615 GG 16 23 39 GT 6 0 6 TT 1 0 1 0.195 0.000 1.467 028379 -- 20 21 41 +- 4 0 4 ++ 0 0 0 0.198 0.000 0.097 028389 AA 1 0 1 AG 2 5 7 GG 20 18 38 4.707 0.342 0.875 028520 AA 24 22 46 AG 0 1 1 GG 0 0 0 0.000 0.011 0.005 028823 -- 2 1 3 +- 4 5 9 ++ 15 17 32 3.070 0.571 3.369 031888 AA 1 4 5 AG 7 7 14 GG 16 12 28 0.044 2.175 2.206 031961 -- 14 17 31 +- 5 5 10 ++ 4 1 5 4.949 0.571 5.998 032047 -- 0 0 0 +- 2 0 2 ++ 21 23 44 0.048 0.000 0.023 032181 CC 0 0 0 CT 6 4 10 TT 16 19 35 0.548 0.209 0.703 033241 CC 13 2 15 CT 6 14 20 TT 5 6 11 4.594 2.200 0.705 038873 -- 0 0 0 +- 1 0 1 ++ 23 23 46 0.011 0.000 0.005 039267 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 039426 AA 23 20 43 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 039440 AA 0 0 0 AG 0 2 2 GG 24 18 42 0.000 0.055 0.024 039534 AA 24 21 45 AG 0 1 1 GG 0 0 0 0.000 0.012 0.006 039792 GG 12 8 20 GT 4 8 12 TT 2 6 8 2.296 1.564 4.642 040059 -- 15 19 34 +- 5 4 9 ++ 1 0 1 0.429 0.209 0.186 040319 AA 0 0 0 AG 1 0 1 GG 16 21 37 0.016 0.000 0.007 040528 AA 3 0 3 AC 6 6 12 CC 8 14 22 0.878 0.623 0.524 041928 CC 0 0 0 CG 2 1 3 GG 21 20 41 0.048 0.012 0.055 042046 AA 0 0 0 AG 2 0 2 GG 20 21 41 0.050 0.000 0.024 042144 AA 0 0 0 AT 2 2 4 TT 20 20 40 0.050 0.050 0.100 042389 AA 0 0 0 AG 3 2 5 GG 20 21 41 0.112 0.048 0.152 042480 CC 0 0 0 CT 9 2 11 TT 14 21 35 1.361 0.048 0.848 042850 CC 5 9 14 CT 18 12 30 TT 1 2 3 7.073 0.517 5.776 043123 AA 22 15 37 AG 0 4 4 GG 0 0 0 0.000 0.263 0.108 043536 -- 0 0 0 +- 1 0 1 ++ 17 20 37 0.015 0.000 0.007 053984 GG 6 7 13 GT 15 10 25 TT 1 5 6 4.219 0.153 1.211 054005 GG 0 0 0 GT 2 0 2 TT 20 22 42 0.050 0.000 0.024 054021 -- 17 9 26 +- 5 12 17 ++ 0 1 1 0.362 1.455 0.876 054058 AA 6 7 13 AG 16 9 25 GG 1 5 6 4.874 0.383 1.211 054220 CC 4 8 12 CT 16 11 27 TT 1 3 4 6.481 0.065 3.892 054231 CC 10 9 19 CT 9 8 17 TT 1 4 5 0.330 0.777 0.154 054332 CC 1 4 5 CT 12 8 20 TT 6 7 13 2.423 0.353 0.391 054402 GG 13 7 20 GT 7 11 18 TT 0 1 1 0.900 1.556 1.726 054479 CC 1 3 4 CG 17 11 28 GG 2 5 7 9.920 0.555 7.704 054498 CC 17 18 35 CT 3 2 5 TT 0 0 0 0.131 0.055 0.178 054832 AA 15 16 31 AG 9 7 16 GG 0 0 0 1.278 0.741 1.978 054859 CC 0 0 0 CT 9 7 16 TT 15 16 31 1.278 0.741 1.978 054958 GG 22 23 45 GT 2 0 2 TT 0 0 0 0.045 0.000 0.022 054984 CC 15 16 31 CT 9 7 16 TT 0 0 0 1.278 0.741 1.978 055159 GG 0 0 0 GT 9 7 16 TT 15 16 31 1.278 0.741 1.978 055289 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 055317 AA 0 1 1 AG 6 12 18 GG 18 9 27 0.490 1.455 1.035 055352 CC 0 0 0 CT 8 7 15 TT 16 15 31 0.960 0.787 1.746 055427 CC 0 0 0 CT 1 0 1 TT 20 21 41 0.012 0.000 0.006 055743 GG 20 21 41 GT 2 0 2 TT 0 0 0 0.050 0.000 0.024 055753 CC 16 16 32 CT 6 3 9 TT 0 1 1 0.548 1.976 0.144 055756 -- 14 13 27 +- 9 6 15 ++ 0 0 0 1.361 0.668 1.985 055883 AA 5 5 10 AC 10 9 19 CC 9 9 18 0.490 0.857 1.317 056153 -- 0 1 1 +- 0 4 4 ++ 24 18 42 0.000 1.252 3.895 056191 CC 1 5 6 CT 8 8 16 TT 15 10 25 0.003 1.675 1.629 056311 AA 24 22 46 AC 0 1 1 CC 0 0 0 0.000 0.011 0.005 056447 GG 22 23 45 GT 2 0 2 TT 0 0 0 0.045 0.000 0.022 056522 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 056585 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 056920 AA 0 0 0 AG 0 3 3 GG 24 20 44 0.000 0.112 0.051 056993 AA 0 0 0 AG 9 7 16 GG 15 16 31 1.278 0.741 1.978 057035 AA 22 23 45 AG 2 0 2 GG 0 0 0 0.045 0.000 0.022 057050 CC 9 9 18 CT 14 10 24 TT 1 4 5 2.344 0.175 0.527 057106 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 057107 AA 0 0 0 AG 9 7 16 GG 15 16 31 1.278 0.741 1.978 057114 AA 21 21 42 AG 3 2 5 GG 0 0 0 0.107 0.048 0.148 057137 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 057156 CC 0 0 0 CT 9 7 16 TT 15 16 31 1.278 0.741 1.978 057351 AA 0 0 0 AT 1 0 1 TT 23 23 46 0.011 0.000 0.005 057361 CC 24 22 46 CG 0 1 1 GG 0 0 0 0.000 0.011 0.005 057389 CC 15 16 31 CT 9 7 16 TT 0 0 0 1.278 0.741 1.978 057410 AA 0 1 1 AG 0 7 7 GG 24 15 39 0.000 0.025 0.919 057412 GG 0 0 0 GT 9 7 16 TT 15 16 31 1.278 0.741 1.978 057444 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 057683 -- 24 21 45 +- 0 1 1 ++ 0 0 0 0.000 0.012 0.006 057701 AA 24 21 45 AG 0 1 1 GG 0 0 0 0.000 0.012 0.006 057752 CC 21 20 41 CT 3 2 5 TT 0 0 0 0.107 0.050 0.152 058142 AA 14 15 29 AG 8 6 14 GG 0 0 0 1.086 0.583 1.626 058188 GG 0 0 0 GT 7 6 13 TT 15 15 30 0.787 0.583 1.364 058437 CC 21 19 40 CT 2 2 4 TT 0 0 0 0.048 0.053 0.100 058472 AA 0 0 0 AT 1 0 1 TT 22 21 43 0.011 0.000 0.006 058590 AA 15 15 30 AG 9 7 16 GG 0 0 0 1.278 0.787 2.039 058821 GG 15 10 25 GT 8 9 17 TT 0 1 1 1.019 0.330 0.948 058824 CC 16 17 33 CT 7 1 8 TT 0 0 0 0.741 0.015 0.479 059160 CC 8 8 16 CT 8 3 11 TT 0 0 0 1.778 0.274 1.767 059185 AA 0 0 0 AG 6 1 7 GG 12 15 27 0.720 0.017 0.448 059189 CC 8 8 16 CT 11 5 16 TT 1 3 4 1.286 1.512 0.000 059317 CC 20 21 41 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 059349 CC 0 0 0 CG 1 0 1 GG 20 21 41 0.012 0.000 0.006 059403 AA 0 0 0 AG 0 1 1 GG 22 20 42 0.000 0.012 0.006 059486 GG 15 16 31 GT 9 7 16 TT 0 0 0 1.278 0.741 1.978 059497 GG 0 0 0 GT 1 0 1 TT 23 23 46 0.011 0.000 0.005 059514 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 059562 CC 0 0 0 CT 0 1 1 TT 24 22 46 0.000 0.011 0.005 059575 AA 1 2 3 AG 6 5 11 GG 17 16 33 0.240 2.200 2.074 059837 AA 13 14 27 AT 11 9 20 TT 0 0 0 2.121 1.361 3.433 059875 CC 0 0 0 CT 1 0 1 TT 23 23 46 0.011 0.000 0.005 060265 GG 0 0 0 GT 1 1 2 TT 23 22 45 0.011 0.011 0.022 060266 AA 0 0 0 AG 1 1 2 GG 23 22 45 0.011 0.011 0.022 060433 CC 2 1 3 CG 10 12 22 GG 11 9 20 0.017 1.455 0.889 060528 CC 21 21 42 CT 3 2 5 TT 0 0 0 0.107 0.048 0.148 060638 AA 15 16 31 AG 8 7 15 GG 0 0 0 1.019 0.741 1.746 060705 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 060870 AA 0 0 0 AG 9 7 16 GG 15 16 31 1.278 0.741 1.978 060879 CC 15 16 31 CT 9 7 16 TT 0 0 0 1.278 0.741 1.978 060949 CC 23 23 46 CG 1 0 1 GG 0 0 0 0.011 0.000 0.005 060978 CC 18 10 28 CT 6 11 17 TT 0 1 1 0.490 0.889 0.749 061017 CC 23 23 46 CG 1 0 1 GG 0 0 0 0.011 0.000 0.005 061057 AA 0 0 0 AC 2 0 2 CC 22 22 44 0.045 0.000 0.023 061123 AA 0 0 0 AG 9 7 16 GG 15 16 31 1.278 0.741 1.978 061687 AA 1 2 3 AG 7 10 17 GG 16 8 24 0.044 0.196 0.000 061857 AA 0 0 0 AG 11 5 16 GG 13 16 29 2.121 0.383 2.104 061912 AA 0 0 0 AG 1 0 1 GG 20 21 41 0.012 0.000 0.006 061914 CC 7 3 10 CT 7 8 15 TT 7 2 9 2.333 0.737 0.464 062112 GG 0 0 0 GT 6 10 16 TT 18 13 31 0.490 1.775 1.978 062144 -- 0 0 0 +- 11 4 15 ++ 10 12 22 2.644 0.327 2.392 062150 CC 13 19 32 CT 10 2 12 TT 0 0 0 1.775 0.053 1.097 062297 AA 0 2 2 AG 12 9 21 GG 12 12 24 2.667 0.028 0.979 062324 AA 14 19 33 AG 10 4 14 GG 0 0 0 1.662 0.209 1.439 062407 CC 8 10 18 CT 8 10 18 TT 8 3 11 2.667 0.040 2.206 062409 CC 8 3 11 CG 8 10 18 GG 8 10 18 2.667 0.040 2.206 062410 AA 0 0 0 AC 10 4 14 CC 14 19 33 1.662 0.209 1.439 062615 -- 21 11 32 +- 1 0 1 ++ 0 0 0 0.012 0.000 0.008 062855 CC 0 0 0 CT 2 0 2 TT 22 21 43 0.045 0.000 0.023 062882 CC 22 21 43 CT 2 0 2 TT 0 0 0 0.045 0.000 0.023 062946 CC 12 17 29 CT 12 5 17 TT 0 0 0 2.667 0.362 2.363 063092 CC 0 0 0 CT 10 5 15 TT 13 18 31 1.775 0.342 1.746 063127 CC 21 20 41 CT 2 2 4 TT 0 0 0 0.048 0.050 0.097 063181 CC 17 23 40 CT 7 0 7 TT 0 0 0 0.700 0.000 0.304 063191 CC 0 0 0 CT 7 0 7 TT 17 23 40 0.700 0.000 0.304 063274 AA 8 3 11 AG 8 12 20 GG 8 8 16 2.667 0.209 0.911 063459 -- 20 22 42 +- 2 0 2 ++ 0 0 0 0.050 0.000 0.024 063606 AA 0 0 0 AG 2 5 7 GG 21 18 39 0.048 0.342 0.312 063682 CC 0 0 0 CT 11 5 16 TT 12 18 30 2.272 0.342 2.039 063756 CC 15 17 32 CG 7 5 12 GG 0 0 0 0.787 0.362 1.097 063938 CC 21 22 43 CT 2 0 2 TT 0 0 0 0.048 0.000 0.023 063966 AA 0 0 0 AG 2 0 2 GG 21 22 43 0.048 0.000 0.023 064448 CC 12 9 21 CT 12 8 20 TT 0 2 2 2.667 0.012 1.045 064640 AA 0 2 2 AG 12 9 21 GG 12 9 21 2.667 0.013 1.322 064693 CC 22 22 44 CT 2 0 2 TT 0 0 0 0.045 0.000 0.023 064696 AA 24 21 45 AG 0 1 1 GG 0 0 0 0.000 0.012 0.006 064771 CC 0 0 0 CT 0 1 1 TT 24 21 45 0.000 0.012 0.006 065203 GG 0 2 2 GT 12 9 21 TT 12 12 24 2.667 0.028 0.979 065335 CC 0 1 1 CT 11 10 21 TT 13 7 20 2.121 1.125 2.781 065446 CC 11 17 28 CG 12 3 15 GG 0 0 0 2.865 0.131 1.919 065565 CC 8 3 11 CT 8 11 19 TT 8 7 15 2.667 0.159 0.997 065730 CC 22 21 43 CT 2 0 2 TT 0 0 0 0.045 0.000 0.023 065777 CC 0 0 0 CG 10 4 14 GG 14 17 31 1.662 0.233 1.527 065900 CC 21 14 35 CT 0 5 5 TT 0 0 0 0.000 0.436 0.178 066062 GG 17 22 39 GT 7 0 7 TT 0 0 0 0.700 0.000 0.312 066144 AA 8 3 11 AG 9 12 21 GG 7 8 15 1.484 0.209 0.469 066151 AA 0 0 0 AG 2 0 2 GG 22 23 45 0.045 0.000 0.022 066167 CC 8 3 11 CG 9 12 21 GG 7 8 15 1.484 0.209 0.469 066740 AA 17 16 33 AT 6 6 12 TT 1 1 2 0.240 0.195 0.435 066745 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 066947 AA 8 3 11 AG 8 13 21 GG 8 7 15 2.667 0.631 0.469 067072 AA 0 0 0 AG 10 5 15 GG 14 18 32 1.662 0.342 1.694 067163 CC 17 23 40 CT 7 0 7 TT 0 0 0 0.700 0.000 0.304 067466 GG 8 3 11 GT 8 12 20 TT 8 8 16 2.667 0.209 0.911 067517 CC 0 0 0 CT 10 5 15 TT 14 18 32 1.662 0.342 1.694 067600 AA 0 2 2 AG 12 9 21 GG 12 12 24 2.667 0.028 0.979 067690 GG 23 23 46 GT 1 0 1 TT 0 0 0 0.011 0.000 0.005 067798 CC 0 0 0 CT 2 2 4 TT 22 21 43 0.045 0.048 0.093 068222 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 068261 AA 21 20 41 AG 3 2 5 GG 0 0 0 0.107 0.050 0.152 068315 CC 24 21 45 CT 0 2 2 TT 0 0 0 0.000 0.048 0.022 068321 AA 8 6 14 AG 8 13 21 GG 8 3 11 2.667 0.917 0.317 068456 CC 0 0 0 CT 10 5 15 TT 14 15 29 1.662 0.408 1.858 068492 AA 1 0 1 AG 12 12 24 GG 11 10 21 1.059 3.094 3.781 068516 CC 17 23 40 CT 7 0 7 TT 0 0 0 0.700 0.000 0.304 068825 AA 8 3 11 AG 7 12 19 GG 7 8 15 2.888 0.209 0.997 068955 AA 14 18 32 AG 10 5 15 GG 0 0 0 1.662 0.342 1.694 069069 -- 20 22 42 +- 1 0 1 ++ 0 0 0 0.012 0.000 0.006 069455 GG 8 7 15 GT 8 12 20 TT 6 2 8 1.564 0.940 0.085 069457 AA 11 11 22 AT 10 9 19 TT 1 1 2 0.468 0.247 0.701 069766 CC 0 0 0 CG 8 5 13 GG 14 16 30 1.086 0.383 1.364 069767 CC 0 0 0 CT 8 5 13 TT 14 16 30 1.086 0.383 1.364 069912 AA 7 8 15 AG 7 12 19 GG 7 3 10 2.333 0.209 0.688 070078 AA 16 19 35 AG 0 3 3 GG 0 0 0 0.000 0.118 0.064 070293 AA 0 0 0 AG 10 5 15 GG 13 17 30 1.775 0.362 1.800 070692 AA 5 6 11 AG 11 12 23 GG 8 3 11 0.114 0.583 0.022 070817 CC 23 18 41 CT 0 1 1 TT 0 0 0 0.000 0.014 0.006 071038 CC 0 0 0 CT 9 4 13 TT 15 16 31 1.278 0.247 1.322 071182 AA 1 1 2 AT 6 4 10 TT 17 16 33 0.240 1.037 1.069 071393 GG 0 4 4 GT 5 8 13 TT 15 7 22 0.408 0.353 0.912 071503 CC 0 0 0 CG 1 1 2 GG 19 18 37 0.013 0.014 0.027 071553 GG 0 0 0 GT 2 0 2 TT 19 19 38 0.053 0.000 0.026 071689 AA 7 8 15 AG 8 10 18 GG 8 2 10 2.112 0.196 0.985 072007 AA 20 20 40 AG 2 2 4 GG 0 0 0 0.050 0.050 0.100 072271 CC 0 0 0 CG 2 0 2 GG 20 23 43 0.050 0.000 0.023 072595 AA 0 0 0 AG 0 3 3 GG 23 18 41 0.000 0.124 0.055 072645 AA 13 15 28 AG 10 4 14 GG 0 0 0 1.775 0.263 1.680 072933 CC 0 2 2 CT 12 10 22 TT 12 10 22 2.667 0.050 1.482 073085 CC 17 13 30 CT 6 8 14 TT 0 0 0 0.517 1.163 1.575 073771 CC 0 0 0 CT 2 2 4 TT 22 19 41 0.045 0.053 0.097 073780 GG 0 0 0 GT 10 4 14 TT 14 16 30 1.662 0.247 1.575 074245 AA 22 22 44 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 074554 CC 21 21 42 CT 3 2 5 TT 0 0 0 0.107 0.048 0.148 074721 GG 22 23 45 GT 2 0 2 TT 0 0 0 0.045 0.000 0.022 074995 GG 0 0 0 GT 0 1 1 TT 24 22 46 0.000 0.011 0.005 075341 AA 14 18 32 AG 10 5 15 GG 0 0 0 1.662 0.342 1.694 075966 AA 17 18 35 AT 7 5 12 TT 0 0 0 0.700 0.342 1.007 076116 AA 0 0 0 AG 10 5 15 GG 12 18 30 1.903 0.342 1.800 076182 GG 13 18 31 GT 10 4 14 TT 0 0 0 1.775 0.220 1.527 076313 AA 22 22 44 AC 1 0 1 CC 0 0 0 0.011 0.000 0.006 076377 -- 0 0 0 +- 0 1 1 ++ 22 21 43 0.000 0.012 0.006 076386 AA 13 18 31 AG 10 4 14 GG 0 0 0 1.775 0.220 1.527 076441 -- 0 0 0 +- 7 5 12 ++ 15 17 32 0.787 0.362 1.097 076596 AA 22 23 45 AG 2 0 2 GG 0 0 0 0.045 0.000 0.022 076599 -- 23 19 42 +- 0 3 3 ++ 0 0 0 0.000 0.118 0.054 076894 AA 16 16 32 AG 5 0 5 GG 1 0 1 0.499 0.000 1.728 077014 AA 9 7 16 AG 7 7 14 GG 6 2 8 2.719 0.015 1.993 077307 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 077516 AA 0 0 0 AG 0 1 1 GG 24 21 45 0.000 0.012 0.006 077740 CC 23 21 44 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 078143 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 078299 AA 0 2 2 AG 6 5 11 GG 18 16 34 0.490 2.200 0.763 078745 CC 0 0 0 CT 1 0 1 TT 23 19 42 0.011 0.000 0.006 079845 AA 10 5 15 AT 3 4 7 TT 1 0 1 1.017 0.735 0.025 080157 AA 0 0 0 AC 1 0 1 CC 16 14 30 0.016 0.000 0.008 080557 AA 14 18 32 AG 10 4 14 GG 0 1 1 1.662 1.252 0.140 080559 GG 23 23 46 GT 1 0 1 TT 0 0 0 0.011 0.000 0.005 080579 CC 1 4 5 CT 8 10 18 TT 15 9 24 0.003 0.175 0.335 080580 AA 0 0 0 AG 0 2 2 GG 24 21 45 0.000 0.048 0.022 080706 AA 23 20 43 AT 0 1 1 TT 0 0 0 0.000 0.012 0.006 080839 AA 22 19 41 AG 1 1 2 GG 0 0 0 0.011 0.013 0.024 081041 CC 0 0 0 CT 0 1 1 TT 24 21 45 0.000 0.012 0.006 081241 GG 0 0 0 GT 1 0 1 TT 22 20 42 0.011 0.000 0.006 081383 AA 0 0 0 AG 6 0 6 GG 16 20 36 0.548 0.000 0.249 081397 CC 0 0 0 CT 1 0 1 TT 22 20 42 0.011 0.000 0.006 082326 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 082451 AA 13 18 31 AG 10 5 15 GG 0 0 0 1.775 0.342 1.746 082721 -- 0 0 0 +- 6 0 6 ++ 16 23 39 0.548 0.000 0.230 083004 -- 0 0 0 +- 10 5 15 ++ 12 18 30 1.903 0.342 1.800 083218 AA 16 9 25 AG 7 10 17 GG 1 4 5 0.044 0.175 0.639 083253 AA 21 23 44 AC 2 0 2 CC 0 0 0 0.048 0.000 0.023 083364 AA 0 0 0 AG 10 4 14 GG 13 18 31 1.775 0.220 1.527 083416 CC 0 0 0 CT 10 4 14 TT 14 18 32 1.662 0.220 1.482 083461 AA 13 18 31 AG 10 4 14 GG 0 0 0 1.775 0.220 1.527 083475 CC 0 0 0 CG 7 4 11 GG 16 18 34 0.741 0.220 0.872 083714 AA 0 0 0 AG 7 0 7 GG 17 23 40 0.700 0.000 0.304 083801 -- 17 17 34 +- 7 5 12 ++ 0 0 0 0.700 0.362 1.035 083839 AA 14 18 32 AG 10 5 15 GG 0 0 0 1.662 0.342 1.694 083860 AA 0 1 1 AG 5 6 11 GG 19 16 35 0.324 0.195 0.015 083977 CC 0 0 0 CT 7 0 7 TT 16 23 39 0.741 0.000 0.312 083986 AA 22 15 37 AG 1 7 8 GG 0 1 1 0.011 0.025 0.483 084171 -- 21 21 42 +- 2 0 2 ++ 0 0 0 0.048 0.000 0.024 084227 CC 20 20 40 CT 3 1 4 TT 0 0 0 0.112 0.012 0.100 084259 CC 13 16 29 CT 10 5 15 TT 0 0 0 1.775 0.383 1.858 084524 AA 21 16 37 AG 0 1 1 GG 0 0 0 0.000 0.016 0.007 084630 CC 0 0 0 CT 9 4 13 TT 11 14 25 1.686 0.281 1.618 084747 AA 0 2 2 AT 5 5 10 TT 16 12 28 0.383 1.406 0.720 084787 CC 6 3 9 CT 8 9 17 TT 7 7 14 1.173 0.001 0.745 084796 CC 0 0 0 CT 9 4 13 TT 12 15 27 1.562 0.263 1.506 085037 GG 16 23 39 GT 5 0 5 TT 1 0 1 0.499 0.000 2.288 085447 AA 13 13 26 AC 10 5 15 CC 0 0 0 1.775 0.468 2.055 085553 CC 11 13 24 CT 12 5 17 TT 0 0 0 2.865 0.468 2.804 085627 CC 0 0 0 CT 10 5 15 TT 13 13 26 1.775 0.468 2.055 085646 AA 16 13 29 AT 7 5 12 TT 0 0 0 0.741 0.468 1.205 085675 CC 13 15 28 CT 10 5 15 TT 0 0 0 1.775 0.408 1.919 085998 AA 0 0 0 AG 2 0 2 GG 21 22 43 0.048 0.000 0.023 086003 AA 0 2 2 AT 11 9 20 TT 12 11 23 2.272 0.007 0.837 086083 AA 0 0 0 AG 9 4 13 GG 14 18 32 1.361 0.220 1.283 086576 CC 17 18 35 CT 7 5 12 TT 0 0 0 0.700 0.342 1.007 086701 CC 0 0 0 CT 1 0 1 TT 23 23 46 0.011 0.000 0.005 086745 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 086948 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 087158 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 087255 AA 6 3 9 AG 9 12 21 GG 9 8 17 1.361 0.209 0.299 087513 CC 0 0 0 CG 9 5 14 GG 15 16 31 1.278 0.383 1.527 087602 CC 0 0 0 CT 0 1 1 TT 24 22 46 0.000 0.011 0.005 087713 AA 23 22 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 087813 GG 15 16 31 GT 9 6 15 TT 0 0 0 1.278 0.548 1.746 088025 AA 0 0 0 AG 3 0 3 GG 20 21 41 0.112 0.000 0.055 088790 -- 14 17 31 +- 10 4 14 ++ 0 0 0 1.662 0.233 1.527 088889 CC 0 0 0 CT 5 0 5 TT 17 22 39 0.362 0.000 0.160 089969 -- 0 0 0 +- 10 5 15 ++ 11 17 28 2.051 0.362 1.919 090029 -- 0 0 0 +- 1 0 1 ++ 23 21 44 0.011 0.000 0.006 090294 -- 20 19 39 +- 2 3 5 ++ 0 0 0 0.050 0.118 0.160 090319 AA 1 2 3 AG 11 8 19 GG 12 12 24 0.618 0.153 0.087 090510 CC 1 2 3 CT 11 9 20 TT 12 12 24 0.618 0.028 0.189 090777 CC 22 21 43 CT 2 2 4 TT 0 0 0 0.045 0.048 0.093 090891 CC 18 13 31 CT 6 10 16 TT 0 0 0 0.490 1.775 1.978 091169 CC 3 1 4 CT 13 10 23 TT 7 12 19 0.631 0.374 0.651 091308 AA 16 12 28 AC 8 10 18 CC 0 1 1 0.960 0.374 0.964 091533 GG 0 0 0 GT 1 1 2 TT 23 22 45 0.011 0.011 0.022 091609 -- 0 0 0 +- 3 3 6 ++ 21 19 40 0.107 0.118 0.224 092280 AA 0 0 0 AC 0 1 1 CC 23 22 45 0.000 0.011 0.006 092440 AA 0 0 0 AG 9 5 14 GG 14 18 32 1.361 0.342 1.482 092463 AA 14 18 32 AG 9 5 14 GG 0 0 0 1.361 0.342 1.482 092617 * 092638 CC 0 0 0 CT 2 0 2 TT 22 23 45 0.045 0.000 0.022 092664 CC 22 22 44 CT 2 0 2 TT 0 0 0 0.045 0.000 0.023 092679 AA 0 0 0 AC 5 6 11 CC 18 16 34 0.342 0.548 0.872 093008 CC 14 17 31 CT 10 5 15 TT 0 0 0 1.662 0.362 1.746 093200 AA 0 0 0 AG 9 5 14 GG 15 18 33 1.278 0.342 1.439 093605 AA 0 0 0 AG 2 0 2 GG 20 23 43 0.050 0.000 0.023 093901 AA 0 0 0 AG 10 5 15 GG 14 18 32 1.662 0.342 1.694 093997 GG 0 0 0 GT 7 4 11 TT 13 14 27 0.900 0.281 1.088 094262 AA 0 1 1 AT 2 3 5 TT 18 14 32 0.055 1.655 1.728 094729 AA 23 22 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 095376 AA 1 2 3 AG 12 8 20 GG 11 13 24 1.059 0.221 0.189 095502 GG 0 0 0 GT 1 0 1 TT 23 23 46 0.011 0.000 0.005 095517 CC 19 16 35 CT 5 6 11 TT 0 1 1 0.324 0.195 0.015 095753 AA 0 0 0 AC 2 0 2 CC 22 23 45 0.045 0.000 0.022 095754 CC 21 21 42 CT 3 2 5 TT 0 0 0 0.107 0.048 0.148 095816 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 095933 -- 1 2 3 +- 12 6 18 ++ 11 10 21 1.059 0.516 0.105 096038 AA 0 1 1 AG 5 9 14 GG 19 13 32 0.324 0.130 0.140 096101 AA 8 3 11 AG 8 11 19 GG 8 9 17 2.667 0.016 1.491 096359 CC 11 13 24 CT 12 8 20 TT 1 2 3 1.059 0.221 0.189 097707 -- 0 0 0 +- 7 5 12 ++ 16 15 31 0.741 0.408 1.131 097793 AA 0 0 0 AG 0 1 1 GG 23 19 42 0.000 0.013 0.006 098006 AA 19 16 35 AT 5 7 12 TT 0 0 0 0.324 0.741 1.007 098184 CC 0 0 0 CT 10 5 15 TT 14 18 32 1.662 0.342 1.694 098204 CC 0 0 0 CG 10 5 15 GG 14 18 32 1.662 0.342 1.694 098245 AA 14 18 32 AC 10 5 15 CC 0 0 0 1.662 0.342 1.694 098247 CC 17 23 40 CG 7 0 7 GG 0 0 0 0.700 0.000 0.304 098299 CC 0 0 0 CT 3 2 5 TT 21 21 42 0.107 0.048 0.148 099016 CC 0 0 0 CT 6 4 10 TT 9 18 27 0.937 0.220 0.903 099689 CC 24 18 42 CT 0 1 1 TT 0 0 0 0.000 0.014 0.006 099738 CC 0 0 0 CT 9 4 13 TT 15 15 30 1.278 0.263 1.364 099786 CC 0 0 0 CT 0 3 3 TT 24 20 44 0.000 0.112 0.051 099831 AA 14 18 32 AT 10 5 15 TT 0 0 0 1.662 0.342 1.694 099987 AA 17 23 40 AG 6 0 6 GG 0 0 0 0.517 0.000 0.224 100008 CC 13 18 31 CT 10 5 15 TT 0 0 0 1.775 0.342 1.746 100045 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 100148 CC 15 22 37 CT 5 0 5 TT 0 0 0 0.408 0.000 0.168 100721 CC 20 21 41 CT 4 2 6 TT 0 0 0 0.198 0.048 0.218 100801 CC 10 9 19 CG 8 11 19 GG 6 3 9 2.371 0.016 1.102 100915 CC 8 3 11 CT 6 11 17 TT 9 9 18 5.239 0.016 2.724 101070 AA 0 0 0 AG 3 2 5 GG 19 18 37 0.118 0.055 0.168 101088 AA 19 20 39 AT 3 0 3 TT 0 0 0 0.118 0.000 0.058 101325 AA 14 15 29 AG 8 5 13 GG 0 0 0 1.086 0.408 1.408 101746 CC 13 8 21 CG 7 10 17 GG 0 3 3 0.900 0.002 0.030 101843 GG 0 0 0 GT 1 0 1 TT 21 23 44 0.012 0.000 0.006 102395 CC 24 20 44 CT 0 3 3 TT 0 0 0 0.000 0.112 0.051 102889 AA 21 23 44 AC 2 0 2 CC 0 0 0 0.048 0.000 0.023 103138 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 103314 CC 13 18 31 CT 10 5 15 TT 0 0 0 1.775 0.342 1.746 103744 -- 0 0 0 +- 2 0 2 ++ 21 21 42 0.048 0.000 0.024 103973 AA 21 22 43 AC 1 0 1 CC 0 0 0 0.012 0.000 0.006 103985 -- 1 2 3 +- 11 8 19 ++ 9 11 20 1.068 0.093 0.283 104194 AA 22 23 45 AG 2 0 2 GG 0 0 0 0.045 0.000 0.022 104233 AA 0 2 2 AC 7 5 12 CC 17 16 33 0.700 2.200 0.435 104271 -- 14 17 31 +- 7 5 12 ++ 0 0 0 0.840 0.362 1.131 104410 CC 0 4 4 CT 7 10 17 TT 17 9 26 0.700 0.175 0.255 105140 CC 23 22 45 CG 1 0 1 GG 0 0 0 0.011 0.000 0.006 105280 -- 0 0 0 +- 2 2 4 ++ 21 16 37 0.048 0.062 0.108 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 006790: AA 021540: TC 028379: A 028823: T 031961: AAAT 032047: A 038873: TAAAA 040059: ATAG 043536: AA 054021: A 055756: A 056153: AGTG 057683: C 062144: CCT 062615: C 063459: C 069069: T 076377: A 076441: T 076599: A 082721: T 083004: TT 083801: T 084171: A 088790: T 089969: AT 090029: CATAAT 090294: A 091609: TAAA 095933: T 097707: TG 103744: G 103985: AAC 104271: ATTT 105280: A Tri-allelic sites: Site Genotype AD-pop ED-pop Total-pop 092617 AA 0 0 0 092617 AC 0 0 0 092617 AG 1 0 1 092617 CC 0 0 0 092617 CG 2 2 4 092617 GG 21 21 42