Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000212 CC 12 23 35 CT 10 0 10 TT 2 0 2 0.002 0.000 1.214 000246 AA 12 23 35 AG 10 0 10 GG 2 0 2 0.002 0.000 1.214 000376 AA 5 14 19 AG 7 9 16 GG 12 0 12 3.153 1.361 4.335 000404 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 000458 AA 2 0 2 AG 10 0 10 GG 12 23 35 0.002 0.000 1.214 000851 CC 6 14 20 CT 9 7 16 TT 6 0 6 0.429 0.840 0.857 000914 CC 14 22 36 CT 5 0 5 TT 0 0 0 0.436 0.000 0.173 001127 CC 21 20 41 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 001130 CC 21 20 41 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 001263 AA 0 0 0 AT 3 0 3 TT 21 22 43 0.107 0.000 0.052 001312 CC 0 0 0 CG 0 1 1 GG 24 21 45 0.000 0.012 0.006 001509 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 001727 CC 22 22 44 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 001801 GG 7 0 7 GT 9 10 19 TT 7 12 19 1.087 1.903 0.372 001809 -- 0 0 0 +- 1 0 1 ++ 22 21 43 0.011 0.000 0.006 002059 GG 23 22 45 GT 1 0 1 TT 0 0 0 0.011 0.000 0.006 002316 CC 22 22 44 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 002584 CC 0 0 0 CG 4 0 4 GG 20 23 43 0.198 0.000 0.093 002606 AA 8 0 8 AG 11 3 14 GG 5 20 25 0.114 0.112 4.651 002676 AA 16 20 36 AT 7 2 9 TT 0 0 0 0.741 0.050 0.556 002766 AA 0 0 0 AC 1 4 5 CC 23 19 42 0.011 0.209 0.148 002786 CC 20 23 43 CT 4 0 4 TT 0 0 0 0.198 0.000 0.093 002825 AA 10 1 11 AG 11 9 20 GG 3 13 16 0.000 0.130 0.911 002935 AA 0 0 0 AG 2 0 2 GG 21 23 44 0.048 0.000 0.023 003095 AA 0 0 0 AG 0 1 1 GG 22 20 42 0.000 0.012 0.006 003148 CC 14 20 34 CG 6 3 9 GG 4 0 4 3.744 0.112 5.880 003189 CC 0 0 0 CT 1 1 2 TT 23 22 45 0.011 0.011 0.022 003197 AA 10 1 11 AG 11 8 19 GG 3 14 17 0.000 0.011 1.491 003294 CC 12 20 32 CG 8 3 11 GG 4 0 4 1.500 0.112 3.539 003383 CC 10 2 12 CT 9 7 16 TT 3 12 15 0.177 0.399 2.734 003477 AA 0 0 0 AG 1 0 1 GG 22 20 42 0.011 0.000 0.006 003630 CC 0 0 0 CT 2 0 2 TT 22 23 45 0.045 0.000 0.022 003677 CC 3 13 16 CT 11 9 20 TT 10 1 11 0.000 0.130 0.911 003728 AA 0 3 3 AG 1 10 11 GG 23 10 33 0.011 0.040 2.074 003748 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 003816 CC 6 1 7 CG 5 9 14 GG 13 13 26 7.118 0.130 3.895 003990 AA 5 1 6 AG 6 9 15 GG 12 12 24 4.154 0.182 1.916 004036 AA 0 1 1 AC 1 0 1 CC 23 21 44 0.011 22.000 19.761 004155 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 004156 CC 0 0 0 CT 0 1 1 TT 23 21 44 0.000 0.012 0.006 004366 AA 0 0 0 AG 1 0 1 GG 23 22 45 0.011 0.000 0.006 004544 CC 22 11 33 CT 0 7 7 TT 0 2 2 0.000 0.299 3.011 004559 AA 0 0 0 AG 1 1 2 GG 21 19 40 0.012 0.013 0.025 004652 CC 0 0 0 CT 2 5 7 TT 21 17 38 0.048 0.362 0.320 004690 CC 1 1 2 CT 12 5 17 TT 11 16 27 1.059 0.499 0.110 004821 AA 18 19 37 AG 4 3 7 GG 2 0 2 3.840 0.118 3.535 004918 AA 0 0 0 AG 2 1 3 GG 22 22 44 0.045 0.011 0.051 004944 CC 1 0 1 CT 9 0 9 TT 14 23 37 0.091 0.000 0.253 005003 CC 0 0 0 CG 4 0 4 GG 20 23 43 0.198 0.000 0.093 005048 AA 1 0 1 AG 8 0 8 GG 15 22 37 0.003 0.000 0.483 005126 AA 10 12 22 AG 7 9 16 GG 7 1 8 3.984 0.182 2.504 005167 CC 12 15 27 CT 11 6 17 TT 1 1 2 0.618 0.153 0.110 005338 -- 1 0 1 +- 8 0 8 ++ 15 22 37 0.003 0.000 0.483 005404 CC 0 0 0 CG 0 2 2 GG 24 20 44 0.000 0.050 0.023 005479 GG 17 2 19 GT 6 10 16 TT 0 10 10 0.517 0.050 3.025 005728 CC 21 22 43 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 005740 CC 21 21 42 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 005813 AA 1 0 1 AG 5 0 5 GG 10 18 28 0.118 0.000 1.411 006266 CC 22 20 42 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 006301 AA 13 20 33 AG 5 0 5 GG 1 0 1 0.294 0.000 1.808 006369 CC 0 0 0 CT 1 0 1 TT 19 21 40 0.013 0.000 0.006 007036 AA 11 18 29 AC 5 3 8 CC 3 0 3 2.466 0.124 3.779 007296 CC 12 1 13 CT 7 9 16 TT 2 12 14 0.399 0.182 2.805 007313 GG 13 22 35 GT 7 0 7 TT 1 0 1 0.002 0.000 0.741 007357 AA 0 0 0 AG 1 0 1 GG 20 23 43 0.012 0.000 0.006 007433 AA 0 0 0 AG 6 0 6 GG 17 23 40 0.517 0.000 0.224 007443 AA 0 0 0 AC 1 0 1 CC 21 23 44 0.012 0.000 0.006 008023 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 008044 AA 0 0 0 AG 7 0 7 GG 17 23 40 0.700 0.000 0.304 008123 CC 23 22 45 CT 1 1 2 TT 0 0 0 0.011 0.011 0.022 008243 AA 2 0 2 AC 4 0 4 CC 18 23 41 3.840 0.000 9.666 008580 GG 21 21 42 GT 3 0 3 TT 0 0 0 0.107 0.000 0.054 008638 CC 0 0 0 CG 2 0 2 GG 22 22 44 0.045 0.000 0.023 008905 AA 23 22 45 AG 0 1 1 GG 1 0 1 24.000 0.011 20.206 008928 CC 4 0 4 CT 6 3 9 TT 13 20 33 3.390 0.112 5.654 009115 CC 21 23 44 CT 2 0 2 TT 0 0 0 0.048 0.000 0.023 009276 CC 0 0 0 CG 2 0 2 GG 21 23 44 0.048 0.000 0.023 009586 CC 0 0 0 CT 1 0 1 TT 21 22 43 0.012 0.000 0.006 009681 CC 0 1 1 CT 1 5 6 TT 20 16 36 0.012 0.499 1.288 009693 CC 0 0 0 CT 2 0 2 TT 21 23 44 0.048 0.000 0.023 009807 AA 0 0 0 AG 2 0 2 GG 21 23 44 0.048 0.000 0.023 009867 CC 22 17 39 CT 1 6 7 TT 0 0 0 0.011 0.517 0.312 009929 CC 0 0 0 CG 2 0 2 GG 22 23 45 0.045 0.000 0.022 009939 CC 0 0 0 CT 2 0 2 TT 22 23 45 0.045 0.000 0.022 009944 AA 22 23 45 AG 2 0 2 GG 0 0 0 0.045 0.000 0.022 010027 AA 22 23 45 AG 2 0 2 GG 0 0 0 0.045 0.000 0.022 010031 AA 0 0 0 AC 2 0 2 CC 22 23 45 0.045 0.000 0.022 010068 -- 18 23 41 +- 5 0 5 ++ 0 0 0 0.342 0.000 0.152 010083 AA 24 21 45 AC 0 2 2 CC 0 0 0 0.000 0.048 0.022 010171 AA 2 7 9 AG 8 13 21 GG 14 3 17 0.296 0.631 0.299 010181 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 010198 AA 0 0 0 AC 1 0 1 CC 23 23 46 0.011 0.000 0.005 010217 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 010277 CC 4 0 4 CG 7 5 12 GG 9 13 22 1.284 0.468 1.311 010299 -- 20 17 37 +- 1 6 7 ++ 0 0 0 0.012 0.517 0.329 010667 AA 24 22 46 AG 0 1 1 GG 0 0 0 0.000 0.011 0.005 010762 AA 17 23 40 AG 7 0 7 GG 0 0 0 0.700 0.000 0.304 010766 GG 22 23 45 GT 2 0 2 TT 0 0 0 0.045 0.000 0.022 010914 CC 0 0 0 CG 2 2 4 GG 22 21 43 0.045 0.048 0.093 010925 AA 14 19 33 AG 5 4 9 GG 4 0 4 4.949 0.209 5.654 010949 CC 0 0 0 CG 5 1 6 GG 18 22 40 0.342 0.011 0.224 011121 AA 0 0 0 AG 7 0 7 GG 16 22 38 0.741 0.000 0.320 013403 GG 6 0 6 GT 7 6 13 TT 8 15 23 2.249 0.583 2.832 013412 CC 5 15 20 CT 8 6 14 TT 8 0 8 1.037 0.583 3.155 013441 CC 5 0 5 CT 9 4 13 TT 7 17 24 0.383 0.233 2.064 013638 AA 6 0 6 AG 6 7 13 GG 7 14 21 2.554 0.840 2.374 013647 AA 5 14 19 AG 9 7 16 GG 5 0 5 0.053 0.840 0.312 013656 CC 6 15 21 CT 6 6 12 TT 7 0 7 2.554 0.583 4.000 015256 GG 9 1 10 GT 10 15 25 TT 5 4 9 0.490 5.714 0.825 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 001809: TT 005338: T 010068: TGTG 010299: G