Site      Genotype1 AD-pop    ED-pop    Total-pop Genotype2 AD-pop    ED-pop    Total-pop Genotype3 AD-pop    ED-pop    Total-pop AD-chi2   ED-chi2   Total-chi2
000079    AA        16        19        35        AC        3         0         3         CC        0         0         0         0.140     0.000     0.064     
000164    --        0         0         0         +-        3         3         6         ++        21        19        40        0.107     0.118     0.224     
000208    AA        1         0         1         AG        0         0         0         GG        22        22        44        23.000    0.000     45.000    
000229    GG        0         0         0         GT        1         0         1         TT        22        22        44        0.011     0.000     0.006     
000448    CC        17        18        35        CT        5         3         8         TT        1         0         1         0.571     0.124     0.418     
000940    CC        21        23        44        CT        1         0         1         TT        0         0         0         0.012     0.000     0.006     
001007    AA        0         0         0         AG        1         0         1         GG        23        23        46        0.011     0.000     0.005     
001245    CC        3         0         3         CT        9         6         15        TT        12        17        29        0.389     0.517     0.303     
001303    AA        0         0         0         AC        1         0         1         CC        23        22        45        0.011     0.000     0.006     
001314    CC        0         0         0         CT        2         0         2         TT        22        22        44        0.045     0.000     0.023     
001324    CC        23        22        45        CT        1         0         1         TT        0         0         0         0.011     0.000     0.006     
001386    CC        24        21        45        CT        0         1         1         TT        0         0         0         0.000     0.012     0.006     
001539    AA        0         0         0         AG        1         0         1         GG        22        19        41        0.011     0.000     0.006     
002049    AA        20        19        39        AG        3         3         6         GG        0         0         0         0.112     0.118     0.230     
002710    AA        19        22        41        AG        4         0         4         GG        0         0         0         0.209     0.000     0.097     
002828    AA        0         0         0         AT        2         0         2         TT        21        21        42        0.048     0.000     0.024     
002952    CC        22        21        43        CT        0         0         0         TT        1         0         1         23.000    0.000     44.000    
003392    CC        14        17        31        CT        7         6         13        TT        2         0         2         0.616     0.517     0.177     
003613    GG        23        23        46        GT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
003652    AA        16        6         22        AC        7         13        20        CC        1         4         5         0.044     0.445     0.020     
003780    AA        0         0         0         AG        2         0         2         GG        20        23        43        0.050     0.000     0.023     
003819    CC        2         0         2         CG        6         6         12        GG        14        17        31        1.099     0.517     0.347     
003925    AA        0         0         0         AG        1         0         1         GG        22        23        45        0.011     0.000     0.006     
003965    GG        22        23        45        GT        0         0         0         TT        1         0         1         23.000    0.000     46.000    
004272    AA        9         15        24        AG        10        5         15        GG        3         0         3         0.007     0.408     0.095     
004994    CC        20        20        40        CT        0         1         1         TT        0         0         0         0.000     0.012     0.006     
005159    CC        0         0         0         CT        0         1         1         TT        24        22        46        0.000     0.011     0.005     
005282    CC        22        21        43        CG        0         0         0         GG        1         0         1         23.000    0.000     44.000    
005515    AA        1         0         1         AC        4         5         9         CC        18        16        34        1.252     0.383     0.186     
005738    CC        18        16        34        CT        4         5         9         TT        1         0         1         1.252     0.383     0.186     
005987    --        0         0         0         +-        0         1         1         ++        23        22        45        0.000     0.011     0.006     
006112    AA        1         0         1         AG        0         0         0         GG        20        22        42        21.000    0.000     43.000    

Note:

AD: African_Descent
ED: European_Descent
Total: All_population
pop : population

Diallelic insertion/deletion polymorphisms are represented as:

+ : insertion allele
- : deletion allele

The + (inserted) allele for each site is listed below:

000164: T
005987: ACA