IL8 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
TAGCAGGTAT GTTTATGTTT ATGACTCTTA ACATTAACAA CATCGTAAGT
50
CAAACTCACT AATATAT
G
TT AAGCATTCTG TTTATGATTC TTTTAACCTA
100 |
var(68):[A:0.01]
GAGGATTGTT GAGCTGGGAC TAATTTCCTC AAATGGGAAA AAAACCCAGG
150
TGAGAGCTGA GACTGCTCCT GAGACTGAGA AAGGCAGCTC TGACGGGATC
200
TCAGATTTTA GCAGCAGGAG TTGAACAATG GGCATAGAAT C
A
G
C
T
T
G
C
C
C
250 |
REPEAT
A
A
G
A
T
C
T
C
C
T
G
A
T
T
A
A
T
A
A
A
C
C
A
T
G
G
A
A
C
A
A
G
A
T
T
T
A
A
A
C
C
C
A
A
G
T
T
C
A
T
300
T
T
C
A
T
T
T
C
A
A
A
G
C
T
C
A
T
A
C
C
A
C
A
T
T
T
T
G
C
C
C
A
C
C
A
T
A
T
T
T
T
G
C
T
TTGTTA
350
TATGACTACA ACTTAGTTCA GGCTTACAAA AAAGTCCTAA TTCTAAAATT
400
CCTATGGCGT GGGTGGGAGG GGATTTAGAT GATTTTGCAT AGGCAAGAAA
450
C
ACCCAGTTT CATGGAGTTT GATGGAAGAG TTATGTACTA ATATGGGAAA
500 |
var(451):[T:0.01]
AGTAGAGGCC ATC
T
T
T
G
T
C
T
T
T
G
T
T
C
T
T
T
C
T
T
T
T
T
T
A
G
A
C
G
G
G
A
G
T
C
T
C
G
550 |
REPEAT
C
T
C
T
T
T
C
A
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
C
G
C
T
A
T
C
T
C
G
G
C
T
C
A
C
T
G
C
A
A
G
600 |
var(558):[G:0.01]
|
var(580):[T:0.03]
|
var(587):[G:0.45]
|
var(591):[A:0.03]
|
var(592):[G:0.02]
C
T
C
C
G
C
C
T
C
C
T
G
G
G
T
T
C
A
C
G
C
C
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
T
G
A
G
T
A
G
C
650
T
G
G
G
A
C
T
A
C
A
G
G
C
G
C
C
C
G
C
C
A
C
C
G
C
T
C
C
C
G
G
C
T
A
A
T
T
T
T
T
T
A
T
A
T
T
T
T
C
A
700
G
T
A
G
A
G
A
C
G
G
G
G
T
T
T
C
A
C
C
G
T
G
T
T
A
G
C
T
A
A
G
A
T
G
G
T
T
T
G
G
A
T
C
T
C
C
T
G
A
A
750
C
T
C
G
T
G
A
T
C
C
G
C
C
C
G
C
C
T
C
G
G
A
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
T
T
G
800
A
G
C
C
A
C
C
G
C
G
C
C
C
G
G
C
C
GTC TTTGTTCTTT CTTGAACTCT TCCTTTTCTT
850
GGGTGATAGA CTTCGTCAAC GTCTAATGAG GATATCTAGG TGCTAGTCTC
900
TGCTCATCAA ATGATTCTTA TGGCTCAGGA GCCGAATGGG ACGTAAATAA
950
ACAGTTAAGT CTCATGAACT CACTTTGCAT TCATCTCTAG AAGATGACAA
1000
AACATTTGTA TTTATGTGTA GCGTGGCACT TTAGTTAAAC TTTGTACCCC
1050
ACTTTGCTCT ATTTTAAAGC AGAATATCCT TAAAAAGGAT ACTTAGTCCT
1100
GCTTTTTTTT TTCC
G
CCTAA GCCCATTTAG TCCTTCTACT CATTATGCAA
1150 |
var(1115):[A:0.01]
GGACTCAAAT GGTTATCTTT ACAGAAGTGA GACAAGATAG AATCAATGCT
1200
CTTGTAGTCA CTTCATCTTT GTCCATTCCC ACTTCTGATG GAGAGGGTTC
1250
TAGGACATAA TGCACTGAAG GTTACATTGT GAGAGATGAA CAACATTTGC
1300
AAAAGAGGTC TTTTTGCCTT GGAAAGGCTT CATTCTTAAA AAAAAATGTG
1350
AGCATCAAGG TTAAGTAGAC CTCATTAGCT CAAACTTTAA GGATGATATC
1400
AGGATAAAGT TGGGCCCATG AGAAGAGAAT GAGAGGGAGA TATAGTGACA
1450
TGAAAATAAG GAGGAAAACG AGGTGTCT
A
T GTAAGTTGGG CTCACCATAA
1500 |
var(1479):[G:0.04]
ATACAAAGGC AACC
G
TTAGG GAAAAGCAAA GAAGTCTTTG CACATCCTCA
1550 |
var(1515):[C:0.01]
GAACTCTGAA TGTCTTAGTG ATGCTGTATG AGTGAGTCTT AATGATAGTG
1600
AACTGAATCA GTCAAGCCAG GTTGTGTCCA TATGAGAATG TGTCTTTGCT
1650
AAACATGCCA ACATCACTGA AGCAAAGAAA CTTGGAGTTT TCTTTAAGAT
1700
ATAGGTCTTT TTTACCTATC CGGCCCAAGC TTTCTCTTCT TGTCACTCCA
1750
TGCACTGTGT TCCGTATGCT AAATAGTTTG AGAAACCCAA ATGGGCCATG
1800
TTCGCCTACA TTTCATTGTC CTGTACTTCC TGTCCTGTAC TAGCAAAGCA
1850
GTCCCATTGG TCTTTCTTCT CCTCATTAAC AATAAAGGTA ACACTTTTGA
1900
T
GTTGTTTCT TCAGAAAACC TTCATTCATC AAAACTGCCT CAAAGATCAT
1950 |
var(1901):[A:0.02]
GTTTGTTTGA TTCCAGAACT TCCTGTAATT ACCTGT
T
ATT GTAACACTCA
2000 |
var(1987):[-:0.93]
TCACTGTATT TTACTTACTT GTGTAACTAA TTTTCCATAT TCTGCACTAG
2050
ACAACAAAGT CCTTTAAGTC AGGTACTATA TCTATTTACA TAGCATTCAC
2100
ATCTCCTACA ATAAGGGACA TTAGCAGATA AACAACACAT ATTAAATGAA
2150
TAATGAAGTT TCTGAAATAC TACAGTTGAA AACTATAGGA GCTACATTAT
2200
ATAGAA
T
AAA CATTTACTTT GCTATAGAAT TCAGTGTAAC CCAGGCATTA
2250 |
var(2207):[C:0.01]
TTTTATCCTC AAGTCTTAGG TTGGTTGGAG AAAGATAACA AAAAGAAACA
2300
TGATTGTGCA GAAACAGACA AACCTTTTTG GAAAGCATTT GAAAATGGCA
2350
TTCCCCCTCC ACAGTGTGTT CACAGTGTGG GCAAATTCAC TGCTCTGTCG
2400
TACTTTCTGA AAATGAAGAA CTGTTACACC AAGGTGAATT ATTTATAAAT
2450
TATGTACTTG CCCAGAAGCG AACAGACTTT TACTATCA
T
A AGAACCCTTC
2500 |
var(2489):[G:0.01]
CTTGGTGCTC TTTATCTACA GAATCCAAGA C
C
TTTCAAGA AAGGTCTTGG
2550 |
var(2532):[T:0.01]
ATTCTTTTCT TCAGGACACT AGGACATAAA GCCACCTTTT TATGATTTGT
2600
TGAAATTTCT CACTCCATCC CTTTTGCTAG TGATCATGGG TCCTCAGAGG
2650
TCAGACTTGG TGTCCTTGGA TAAAGAGCAT GAAGCAACAG TGGCTGAACC
2700
AGAGTTGGAA CCCAGATGCT CTTTCCACTA AGCATACAAC TTTCCATTAG
2750
ATAACACCTC CCTCCCACCC CAACCAAGCA GCTCCAGTGC ACCACTTTCT
2800
GGAGCATAAA CATACCTTAA CTTTACAACT TGAGTGGCCT TGAATACTGT
2850
TCCTATCTGG AATGTGCTGT TCTCTTTCAT CTTCCTCTAT TGAAGCCCTC
2900
CTATTCCTCA ATGCCTTGCT CCAACTGCCT TTGGAAGATT CTGCTCTTAT
2950
GCCTCCACTG GAATTAA
T
GT CTTAGTACCA CTTGTCTATT CTGCTATATA
3000 |
var(2968):[C:0.03]
GTCAGTCCTT ACATTGCTTT CTTCTTCTGA TAGACCAAAC TCTTTAAGGA
3050
CAAGTACCTA GTCTTATCTA TTTCTAGATC CCCCACATTA CTCAGAAAGT
3100
TACTCCATAA ATGTTTGTGG AACTGATTTC TATGTGAAGC ACATGTGCCC
3150
CTTCACTCTG TTAACATGCA TTAGAAAACT AAATCTTTTG AAAAGTTGTA
3200
GTATGCCCCC TAAGAGCAGT AAC
A
G
A
A
A
C
T
A
A
G
AGTTCCT AGAAACTCTC
3250 |
var(3224):[-:0.99]
TAAAATGCTT AGAAAAAGAT TTATTTTAAA TTACCTCCCC AATAAAATGA
3300
TTGGCTGGCT TATCTTCACC ATCATGATAG CATCTGTAAT TAACTGAAAA
3350
AAAATAATTA TGCCATTAAA AGAAAATCAT CCATGATCTT GTTCTAACAC
3400
CTGCCACTCT AGTACTATAT CTGTCAC
A
TG GTACTATGAT AAAGTTATCT
3450 |
var(3428):[G:0.02]
AGAAATAAAA AAGCATACA
A
TTGATAATTC ACCAAATTGT GGAGCTTCAG
3500 |
var(3470):[T:0.43]
TATTTTAAAT GTATATTAAA ATTAAATTAT TTTAAAGATC AAAGAAAACT
3550
TTC
G
TCATAC T
C
CGTATTTG ATAAGGAACA AATAGGAAGT GTGATGACTC
3600 |
var(3554):[A:0.01]
|
var(3562):[G:0.01]
AGGTTTGCCC TGAGGGGATG GGCCATCAGT TGCAAATCGT GGAATTTCCT
3650
CTGACATAAT GAAAAGATGA GGGTGCATAA GTTCTCTAGT AGGGTGATGA
3700
TATAAAAAGC CACCGGAGCA CTCCATAAGG CACAAACTTT CAGAGAC
A
G
C
3750 | Exon 1 |
UTR
A
G
A
G
C
A
C
A
C
A
A
G
C
T
T
C
T
A
G
G
A
C
A
A
G
A
G
C
C
A
G
G
A
A
G
A
A
A
C
C
A
C
C
G
G
A
A
G
G
A
3800 |
var(3794):[A:0.02]
A
C
C
A
T
C
T
C
A
C
T
G
T
G
T
G
T
A
A
A
C
A
T
G
A
C
T
T
C
C
A
A
G
C
T
G
G
C
C
G
T
G
G
C
T
C
T
C
T
T
3850 |
var(3821):[T:0.13]
M T S K L A V A L L 10
G
G
C
A
G
C
C
T
T
C
C
T
G
A
T
T
T
C
T
G
C
A
G
C
T
C
T
G
T
G
T
G
A
A
G
GTAAG CACATCTTTC
3900
A A F L I S A A L C E 21
TGACCTACAG CGTTTTCCTA TGTCTAAATG TGATCCTTAG ATAGCAAAGC
3950
TATTCTTGAT GCTTTGGTAA CAAACATCCT TTTTATTCAG AAACAGAATA
4000
TAATCTTAGC AGTCAATTAA TGTTAAA
T
TG AAGATTTAGA AAAAACTATA
4050 |
var(4028):[A:0.01]
TATAACACTT AGGAAAGTAT AAAGTTTGAT CAATATAGAT ATTCTGCTTT
4100
TATAATTTAT ACCA
T
GTAGC ATGCATATAT TTAACGTAAA TAAGTAATTT
4150 |
var(4115):[G:0.46]
ATAGTATGTC CTATTGAGAA CCACGGTTAC CT
A
T
ATTATG TATTAATATT
4200 |
var(4183):[G:0.02]
|
var(4184):[C:0.01]
GAGTTGAGCA AGGTAACTCA GACAATTCCA CTCCTTGTAG TATTTCATTG
4250
ACAAGCCTCA GATTTGTCAT TAATTCCTGT CTGGTTTAAA GATACCCTGA
4300
TTATAGACCA GGCATGTATA ACTTATTTAT ATATTTCTGT TAATTCTTTC
4350
TGAAGGCAAT TTCTATGCTG GAGAGTCTTA GCTTGCCTAC TATAAATAAC
4400
ACTGTGGTAT CACAGAGGAT TATGCAATAT TGACCAGATA AAAATACCAT
4450
GAAGATGTTG ATATTGTACA AAAAGAACTC TAACTCTTTA TATAGGAAGT
4500
C
GTTCAATGT TGTCAGTTAT GACTGTTTTT TAAAACAAAG AACTAACTGA
4550 |
var(4501):[T:0.23]
GGTCAAGGGC TAGGAGAATA TTCAGGAATG AGTTCACTAG AAACATGATG
4600
CCTTCCATAG TCTCCAAATA ATCATATTGG AATTAGAAAG GAAGTAGCTG
4650
GCAGAGCTGT GCCTGTTGAT AAAATCAATC CTTAATCACT TTTTCCCCCA
4700
ACAG
G
T
G
C
A
G
T
T
T
T
G
C
C
A
A
G
G
A
G
T
G
C
T
A
A
A
G
A
A
C
T
T
A
G
A
T
G
T
C
A
G
T
G
C
A
T
4750 | Exon 2
G A V L P R S A K E L R C Q C I 37
A
A
A
G
A
C
A
T
A
C
T
C
C
A
A
A
C
C
T
T
T
C
C
A
C
C
C
C
A
A
A
T
T
T
A
T
C
A
A
A
G
A
A
C
T
G
A
G
A
G
4800
K T Y S K P F H P K F I K E L R 53
T
G
A
T
T
G
A
G
A
G
T
G
G
A
C
C
A
C
A
C
T
G
C
G
C
C
A
A
C
A
C
A
G
A
A
A
T
T
A
T
G
T
A
A
G
T
A
C
T
T
4850 |
NOT SCANNED
V I E S G P H C A N T E I M 67
T
A
A
A
A
A
A
G
A
T
T
A
G
A
T
A
T
T
T
T
G
T
T
T
T
A
G
C
A
A
A
C
T
T
A
A
A
A
T
T
A
A
G
G
A
A
G
G
T
G
4900
G
A
A
A
T
A
T
T
T
A
G
G
A
A
A
G
T
T
C
C
A
G
G
T
G
T
T
A
G
G
A
T
T
A
C
A
G
T
A
G
T
A
A
A
T
G
A
A
A
C
4950 |
REPEAT
A
A
A
A
C
A
A
A
A
T
AAAAA
A
TATT TGTCTACATG ACATTTAAAT ATGGTAGCTT
5000 |
var(4966):[-:0.56]
CCACAACTAC TATAAATGTT ATTTTGGACT TAGACTTTAT GCCTGACTTA
5050
AGGAATCATG ATTTGAATGC AAAAACTAAA TATTAATCTG AACCATTTCT
5100
TTCTTATTTC AGTGTAAAG
C
T
T
T
C
T
G
A
T
G
G
A
A
G
A
G
A
G
C
T
C
T
G
T
C
T
G
G
A
C
C
5150 | Exon 3 |
UTR
C
C
A
A
G
G
A
A
A
A
C
T
G
G
G
T
G
C
A
G
A
G
G
G
T
T
G
T
G
G
A
G
A
A
G
T
T
T
T
T
G
A
A
G
A
G
GTAA
5200
GTTATATATT TTTTAATTTA AATTTTTCAT TTATCCTGAG ACATATAATC
5250
CAAAGTCAGC CTATAAATTT CTTTCTGTTG CTAAAAATCG TCATTAGGTA
5300
TCTGCCTTTT TGGTTAAAAA AAAAA
G
GAAT AGCATCAATA GTGAGTTTGT
5350 |
var(5326):[-:0.94]
TGTACT
C
ATG ACCAGAAAGA CCATACATAG TTTGCCCAGG AAATTCTGGG
5400 |
var(5357):[T:0.20]
TTTAAGCTTG TGTCCTATAC TCTTAGTAAA GTTCTTTGTC ACTCCCAGTA
5450
GTGTCCTATT TTAGATGATA ATTTCTTTGA TCTCCCTATT TATAGTTGAG
5500
AATATAGAGC ATTTCTAACA CATGAATGTC AAAGACTATA TTGACTTTTC
5550
AAGAACCCTA CTTTCCTTCT TATTAAACAT AGCTCATCTT TATATTTTTA
5600
ATTTTATTTT AG
G
G
C
T
G
A
G
A
A
T
T
C
A
T
A
A
A
A
A
A
A
T
T
C
A
T
T
C
T
C
T
G
T
G
G
T
A
T
5650 | Exon 4 |
UTR
C
C
A
A
G
A
A
T
C
A
G
T
G
A
A
G
A
T
G
C
C
A
G
T
G
A
A
A
C
T
T
C
A
A
G
C
A
A
A
T
C
T
A
C
T
T
C
A
A
C
5700
A
C
T
T
C
A
T
G
T
A
T
T
G
T
G
T
G
G
G
T
C
T
G
T
T
G
T
A
G
G
G
T
T
G
C
C
A
G
A
T
G
C
A
A
T
A
C
A
A
G
5750 |
REPEAT
A
T
T
C
C
T
G
G
T
T
A
A
A
T
T
T
G
A
A
T
T
T
C
A
G
T
A
A
A
C
A
A
T
G
A
A
T
A
G
T
T
T
T
T
C
A
T
T
G
T
5800
A
C
C
A
T
G
A
A
A
T
A
T
C
C
A
G
A
A
C
A
T
A
C
T
T
A
T
A
T
G
T
A
A
A
G
T
A
T
T
A
T
T
T
A
T
T
T
G
A
A
5850
T
C
T
A
C
A
A
A
A
A
A
C
A
A
C
A
A
A
T
A
A
T
T
T
T
T
A
A
A
T
A
T
A
A
G
G
A
T
T
T
T
C
C
T
A
G
A
T
A
T
5900
T
G
C
A
C
G
G
G
A
G
A
A
T
A
T
A
C
A
A
A
T
A
G
C
A
A
A
A
T
T
G
A
G
G
C
C
A
A
G
G
G
C
C
A
A
G
A
G
A
A
5950
T
A
T
C
C
G
A
A
C
T
T
T
A
A
T
T
T
C
A
G
G
A
A
T
T
G
A
A
T
G
G
G
T
T
T
G
C
T
A
G
A
A
T
G
T
G
A
T
A
T
6000
T
T
G
A
A
G
C
A
T
C
A
C
A
T
A
A
A
A
A
T
G
A
T
G
G
G
A
C
A
A
T
A
A
A
T
T
T
T
G
C
C
A
T
A
A
A
G
T
C
A
6050 |
REPEAT
A
A
T
T
T
A
G
C
T
G
G
A
A
A
T
C
C
T
G
G
A
T
T
T
T
T
T
T
C
T
G
T
T
A
A
A
T
C
T
G
G
C
A
A
C
C
C
T
A
G
6100 |
var(6070):[A:0.01]
T
C
T
G
C
T
A
G
C
C
A
G
G
A
T
C
C
A
C
A
A
G
T
C
C
T
T
G
T
T
C
C
A
C
T
G
T
G
C
C
T
T
G
G
T
T
T
C
T
C
6150 |
REPEAT
C
T
T
T
A
T
T
T
C
T
A
A
G
T
G
G
A
A
A
A
A
G
T
A
T
T
A
G
C
C
A
C
C
A
T
C
T
T
A
C
C
T
C
A
C
A
G
T
G
A
6200 |
var(6174):[C:0.04]
T
G
T
T
G
T
G
A
G
G
A
C
A
T
G
T
G
G
A
A
G
C
A
C
T
T
T
A
A
G
T
T
T
T
T
T
C
A
T
C
A
T
A
A
C
A
T
A
A
A
6250
T
T
A
T
T
T
T
C
A
A
G
T
G
T
A
A
C
T
T
A
T
T
A
A
C
C
T
A
T
T
T
A
T
T
A
T
T
T
A
T
G
T
A
T
T
T
A
T
T
T
6300
A
A
G
C
A
T
C
A
A
A
T
A
T
T
T
G
T
G
C
A
A
G
A
A
T
T
T
G
G
A
A
A
A
A
T
A
G
A
A
G
A
T
G
A
A
T
C
A
T
T
6350
G
A
T
T
G
A
A
T
A
G
T
T
A
T
A
A
A
G
A
T
G
T
T
A
T
A
G
T
A
A
A
T
T
T
A
T
T
T
T
A
T
T
T
T
A
G
A
T
A
T
6400 |
var(6370):[C:0.01]
T
A
A
A
T
G
A
T
G
T
T
T
T
A
T
T
A
G
A
T
A
A
A
T
T
T
C
A
A
T
C
A
G
G
G
T
T
T
T
T
A
G
A
T
T
A
A
A
C
A
6450 |
REPEAT
|
var(6434):[A:0.01]
A
A
C
A
A
A
C
A
A
T
T
G
G
G
T
A
C
C
C
A
G
T
T
A
A
A
T
T
T
T
C
A
T
T
T
C
A
G
A
T
A
A
A
C
A
A
C
A
A
A
6500 |
var(6492):[T:0.23]
T
A
A
T
T
T
T
T
T
A
G
T
A
T
A
A
G
T
A
C
A
T
T
A
T
T
G
T
T
T
A
T
C
T
G
A
A
A
T
T
T
T
A
A
T
T
G
A
A
C
6550
T
A
A
C
A
A
T
C
C
T
A
G
T
T
T
G
A
T
A
C
T
C
C
C
A
G
T
C
T
T
G
T
C
A
T
T
G
C
C
A
G
C
T
G
T
G
T
T
G
G
6600
T
A
G
T
G
C
T
G
T
G
T
T
G
A
A
T
T
A
C
G
G
A
A
T
A
A
T
G
A
G
T
T
A
G
A
A
C
T
A
T
T
A
A
A
A
C
A
G
C
C
6650
A
A
A
A
C
T
C
C
A
C
A
G
T
C
A
A
T
A
T
T
A
G
T
A
A
T
T
T
C
T
T
G
C
T
G
G
T
T
G
A
A
A
C
T
T
G
T
T
T
A
6700
T
T
A
T
G
T
A
C
A
A
A
T
A
G
A
T
T
C
T
T
A
T
A
A
T
A
T
T
A
T
T
T
A
A
A
T
G
A
C
T
G
C
A
T
T
T
T
T
A
A
6750
A
T
A
C
A
A
G
G
C
T
T
T
A
T
A
T
T
T
T
T
A
A
C
T
T
T
A
A
G
A
T
G
T
T
T
T
T
A
T
G
T
G
C
T
C
T
C
C
A
A
6800
A
T
T
T
T
T
T
T
T
A
C
T
G
T
T
T
C
T
G
A
T
T
G
T
A
T
G
G
A
A
A
T
A
T
A
A
A
A
G
T
A
A
A
T
A
T
G
A
A
A
6850 |
var(6846):[C:0.01]
C
A
T
T
T
A
A
A
A
T
A
T
A
A
T
T
T
G
T
T
G
T
C
A
A
A
G
T
A
A
TCAAGTGTTT GTCTTTTTTT
6900
TAGTTTTAGC TTATTGGGAT TCTCTTTGTT TATATTTAAA ATTATACTTT
6950
GATTTAGAAA ACATAAATGC TTCCCCTTAG CATTTTGTTT ATGGAAAATT
7000
ACAAACTTTT ATTTTTAGAA AACAGAACTC CTTTCCAGAA ATAGGTTACA
7050
AACAGTAGTG TCCTCCACAG AATGTTGGAA ATGTTTTCAA CTCCCCACTG
7100
TATACTATCT TGCTAATAAG TCTGTCTTCA GATTTCGATT AACCGGTTTG
7150
TATGTC