IL5 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
TCTTAAGCAA GCCTATTGTG ATTCCTACTC CCGAAAATCT CACTCCCGAT
50
AGATTTTCTG AAGTGAGCCA AACTTCTGCA GTCTCAAGGA AACATTTCTC
100
AAGGAAAACA TTTCTCAAGT G
C
GCAAATCA GACACATCTA ACCAAGAGTC
150 |
var(122):[T:0.07]
CAAAACTTCA GCACAAACAA AACCAAACGT GGTACAAGAA GGCCGCCACT
200
GAAATCCAAG ACTGTCTTTA TCTTTCCAGT GCAGAGCTGG GATTGAGTAT
250
GTATGAAAGG TGTGTCTACC TCCCAGCTGC CTCTACTTCT CCTACACAAC
300
TGCACCTAGC TTTGGAAAAC TGTTCTGGGC AACAGTTTGT GTTTGGTACC
350
ATCTGTTCTT GACGCTCAAG ACAGGCCTGA AGTCAGGCTT CTAGGCTGCA
400
ACATAGAGCC ACTCTGGGAT GCTCACTGAA GCACTCTATT AAAAAC
A
ATG
450 |
var(447):[T:0.01]
AGCCACATAC ACCTCCATCA TATGTGTTCA GGCCAGGGAA AAAGGAAGTG
500
TGTGATCTAG GAGGGGGCCT CCATTTGTAC CTTTCTGGGA TTACAGGTCT
550
GAGCCTAAGG AACAAAGGCT GATTCCCCTA ATTTCATGGC CC
G
CCCAAGG
600 |
var(593):[A:0.01]
TGTGAAAGGA CACCTCCACC CTTATGGGAC ATAAAGGAGA GGACACATCC
650
ATGTATT
A
T
G
TATCTGTGAC AGATATTTAT TGGTTGCCTT CCTAGAATCT
700 |
var(658):[G:0.16]
|
var(660):[A:0.02]
GTGTCCCCCT TACTACTGGG A
C
C
C
C
A
C
A
T
T
T
C
T
A
A
G
C
T
A
T
G
C
A
G
T
T
G
A
G
G
750 |
REPEAT
T
A
G
G
A
T
T
A
G
G
G
T
C
A
C
C
T
C
T
A
G
C
T
C
C
A
G
G
G
A
G
A
G
C
C
A
A
T
C
A
G
T
A
T
A
T
A
C
T
A
800
C
A
C
C
C
T
G
G
T
C
A
C
A
G
T
T
C
A
A
G
G
A
T
G
A
A
C
A
T
G
T
G
A
C
C
C
T
T
G
T
C
A
G
A
A
A
G
A
G
A
850
C
T
G
A
A
T
T
T
G
A
A
A
G
C
T
T
T
T
G
A
T
T
A
A
A
C
A
A
T
C
A
G
A
A
A
A
G
C
A
C
A
G
C
T
T
G
C
T
T
T
900
T
T
C
C
T
G
C
T
G
C
T
C
A
T
G
A
A
C
A
G
A
A
T
A
C
A
T
A
T
A
G
A
T
C
C
A
G
G
A
G
T
C
T
G
G
A
C
A
T
C
950 |
var(929):[C:0.45]
A
T
C
T
T
G
A
G
A
C
C
T
C
A
A
T
G
G
G
A
A
A
G
G
T
G
C
C
C
A
A
G
G
A
T
G
G
A
G
T
C
A
A
GGAAGAG
1000 |
var(961):[T:0.01]
TCACTGAAGC CATCAAAATG TAAAAGAGCC T
C
C
A
T
T
C
C
T
G
G
A
C
T
G
T
T
T
G
G
1050 |
REPEAT
T
T
C
T
A
T
G
A
G
C
C
A
A
T
A
C
C
T
T
C
C
C
T
C
T
T
T
A
T
C
T
T
C
A
A
C
A
A
C
T
T
T
A
G
G
T
T
A
G
G
1100 |
var(1062):[T:0.01]
T
T
T
T
T
A
G
T
C
A
C
T
G
G
C
A
A
C
A
G
A
A
A
G
G
A
T
C
C
T
A
A
T
C
A
A
G
A
C
C CCAGTGAACA
1150
GAACTCGACC CTGCCAAGGC TTGGCAGTTT CCATTTCAAT CACTGTCTTC
1200
CCACCAGTAT TTTCAATTTC TTTTAAGACA GATTAATCTA GCCACAGTCA
1250
TAGTAGAACA TAGCCGATCT GAAAAAAACA TTCCCAATAT TTATGTATTT
1300
TAGCATAAAA TTCTGTTTAG TGGTCTACCT TATACTTTGT TTTGCACACA
1350
TCTTTTAAGA GGAAGTTAAT TTTCTGATTT TAAGAAATGC AAATGTGGGG
1400
CAATGATGTA TTAACCCAAA GATTCTTCGT AATAGAAAAT GTTTTTAAAG
1450
GGGGGAAACA GGGATTTTTA TTATTAAAAG ATAAAAGTAA ATTTATTTTT
1500
TAAGATATAA GGCATTGGAA ACATTTAGTT TCACGATATG CCATTATTAG
1550
GCATTCTCTA TCTGATTGTT AGAAATTATT CATTTCCTCA AAGACAGACA
1600
ATAAATTGAC TGGGGACGCA GTCTTGTACT
A
T
G
C
A
C
T
T
T
C
T
T
T
G
C
C
A
A
A
G
1650 | Exon 1 |
UTR
G
C
A
A
A
C
G
C
A
G
A
A
C
G
T
T
T
C
A
G
A
G
C
C
A
T
G
A
G
G
A
T
G
C
T
T
C
T
G
C
A
T
T
T
G
A
G
T
T
T
1700
M R M L L H L S L 9
G
C
T
A
G
C
T
C
T
T
G
G
A
G
C
T
G
C
C
T
A
C
G
T
G
T
A
T
G
C
C
A
T
C
C
C
C
A
C
A
G
A
A
A
T
T
C
C
C
A
1750
L A L G A A Y V Y A I P T E I P 25
C
A
A
G
T
G
C
A
T
T
G
G
T
G
A
A
A
G
A
G
A
C
C
T
T
G
G
C
A
C
T
G
C
T
T
T
C
T
A
C
T
C
A
T
C
G
A
A
C
T
1800
T S A L V K E T L A L L S T H R T 42
C
T
G
C
T
G
A
T
A
G
C
C
A
A
T
G
A
G
GT AATTTTCTTT ATGA
T
TCCTA CAGTCTGTAA
1850 |
var(1835):[C:0.01]
L L I A N E 48
AGTGCATAGG TAATCATTTG TGATGGTTCC TTTACTATAT ATAGAGATCT
1900
GTTATAAATA ATAAGATTCT GAGCACATTA GTACATGGGT GATAACTACA
1950
TCACCAGCAA AC
A
TTCTGTT AAAAGTTATG AATGCTGGTG TGCTGTAAAA
2000 |
var(1963):[G:0.01]
ATGATTGTAT TTCCTTTCCT CTCCAG
A
C
T
C
T
G
A
G
G
A
T
T
C
C
T
G
T
T
C
C
T
G
T
A
2050 | Exon 2
T L R I P V P V 56
C
A
T
A
A
A
A
A
T
G TAAGTTAAAT TATGATTCAG TAAAATGATG GCATGAATAA
2100
H K N 59
GTAAATTTCC TGTTTTAAGC TGTAAATCAT TAGTTATCAT TGGAACTATT
2150
TAATTTTCTA TATTTTGTTT TCATATGGGT GGCTGTGAAT GTCTGTACTT
2200
ATA
A
A
T
A
T
G
A
G
G
A
A
T
G
A
C
T
T
T
T
T
A
T
C
A
A
G
T
A
G
A
A
T
C
C
T
T
T
A
A
A
C
A
A
G
T
G
G
2250 |
REPEAT
|
var(2248):[G:0.03]
A
T
T
A
G
G
C
T
C
T
T
T
G
G
T
G
A
T
G
T
T
G
T
T
A
G
T
T
T
G
C
C
T
C
C
C
A
A
A
G
A
G
C
A
T
C
G
T
G
T
2300 |
var(2297):[A:0.01]
C
A
G
G
G
A
T
T
C
T
T
T
C
C
A
G
A
A
G
G
A
T
T
C
C
A
C
A
C
T
G
A
G
T
G
A
G
A
G
G
T
GCGTGCTAG
2350
TCTCCGTGCA GTTCTGACTC TTTCTCACTC TAACGTGTTT CTGAAAGTAT
2400
TAGCAACTCA GAATTATATT TTTAGAACCA TGATCAGTAG ACATTAAAAT
2450
ATATAACAAA TGCCCTATAT TAATAATTTC TGCATACTTA AATAATTATG
2500
ACTATATGAT GGTGTTGTAT GCATTTGAAT ATGTCCTGGT CATATTAAAA
2550
TGTAAAATAT ATAGTTTTAT TAGTCTAAAT AGAATAAAAC TACCAGCTAG
2600
AACTGTAGAA ACACATTGAT ATGAGTTTAA TGTATAATGC ATTACACTTC
2650
CAAAACATTT TTTTCCAGTT ACATAATTAA GTTATATCCT TTATAAAACT
2700
CCTCAGTAAT CATATAA
G
CT TCATCTACTT TTTGAAAATT TTATCTTAAT
2750 |
var(2718):[A:0.11]
ATGTGGTGGT TTGTTGCCTA GAAAACAAAC AAAAAACTCT TTGGAGAAGG
2800
GAACTCATGT AAATACCACA AAACAAAGCC TAACTTTGTG GACCAAAATT
2850
GTTTTAATAA TTA
T
T
T
T
T
T
A
A
T
T
G
A
T
G
A
A
T
T
A
A
A
A
A
G
T
A
T
A
T
A
T
A
T
T
T
A
T
2900 |
REPEAT
T
G
T
G
T
A
C
A
A
T
A
T
G
A
T
G
T
T
T
T
G
A
A
G
T
A
T
G
T
A
T
A
C
A
T
T
G
C
A
G
A
A
T
G
G
ACAAT
2950
GGACCAAATT TTTATACCTT GTCTTGATTA TTTGCATTTT AAAAATTTTC
3000
CTCATTTAG
C
A
C
C
A
A
C
T
G
T
G
C
A
C
T
G
A
A
G
A
A
A
T
C
T
T
T
C
A
G
G
G
A
A
T
A
G
G
C
A
C
3050 | Exon 3
H Q L C T E E I F Q G I G T 73
A
C
T
G
G
A
G
A
G
T
C
A
A
A
C
T
G
T
G
C
A
A
G
G
G
G
G
T
A
C
T
G
T
G
G
A
A
A
G
A
C
T
A
T
T
C
A
A
A
A
3100
L E S Q T V Q G G T V E R L F K 89
A
C
T
T
G
T
C
C
T
T
A
A
T
A
A
A
G
A
A
A
T
A
C
A
T
T
G
A
C
G
G
C
C
A
A
A
A
A
GT AAGTT
A
CACA
3150 |
var(3146):[G:0.01]
N L S L I K K Y I D G Q K 102
CATTCAATGG AAGCTATATT TGTCTGGCTG TGCCTATTTC TATGGAATTG
3200
ACAGTTTCCT GTAATACCTA TTGTCATTTT TCTTTTTTCA CAG
A
A
A
A
A
G
T
3250 | Exon 4
K K 104
G
T
G
G
A
G
A
A
G
A
A
A
G
A
C
G
G
A
G
A
G
T
A
A
A
C
C
A
A
T
T
C
C
T
A
G
A
C
T
A
C
C
T
G
C
A
A
G
A
G
3300
C G E E R R R V N Q F L D Y L Q E 121
T
T
T
C
T
T
G
G
T
G
T
A
A
T
G
A
A
C
A
C
C
G
A
G
T
G
G
A
T
A
A
T
A
G
A
A
A
G
T
T
G
A
G
A
C
T
A
A
A
C
3350 |
var(3321):[A:0.06]
|
UTR
F L G V M N T E W I I E S 134
T
G
G
T
T
T
G
T
T
G
C
A
G
C
C
A
A
A
G
A
T
T
T
T
G
G
A
G
G
A
G
A
A
G
G
A
C
A
T
T
T
T
A
C
T
G
C
A
G
T
3400
G
A
G
A
A
T
G
A
G
G
G
C
C
A
A
G
A
A
A
G
A
G
T
C
A
G
G
C
C
T
T
A
A
T
T
T
T
C
A
G
T
A
T
A
A
T
T
T
A
A
3450
C
T
T
C
A
G
A
G
G
G
A
A
A
G
T
A
A
A
T
A
T
T
T
C
A
G
G
C
A
T
A
C
T
G
A
C
A
C
T
T
T
G
C
C
A
G
A
A
A
G
3500
C
A
T
A
A
A
A
T
T
C
T
T
A
A
A
A
T
A
T
A
T
T
T
C
A
G
A
T
A
T
C
A
G
A
A
T
C
A
T
T
G
A
A
G
T
A
T
T
T
T
3550
C
C
T
C
C
A
G
G
C
A
A
A
A
T
T
G
A
T
A
T
A
C
T
T
T
T
T
T
C
T
T
A
T
T
T
A
A
C
T
T
A
A
C
A
T
T
C
T
G
T
3600
A
A
A
A
T
G
T
C
T
G
T
T
A
A
C
T
T
A
A
T
A
G
T
A
T
T
T
A
T
G
A
A
A
T
G
G
T
T
A
A
G
A
A
T
T
T
G
G
T
A
3650
A
A
T
T
A
G
T
A
T
T
T
A
T
T
T
A
A
T
G
T
T
A
T
G
T
T
G
T
G
T
T
C
T
A
A
T
A
A
A
A
C
A
A
A
A
A
T
A
G
A
3700
C
A
A
C
T
G
T
T
C
A ATTTGCTGCT GGCCTCTGTC TTAGCAATTG AAGTTAGCAC
3750
AGTCCATTGA GTACATGCCC AGTTTGGAGG AAGGGTCTGA GCACATGTGG
3800
CTGAGCATCC CCATTTCTCT GGAGAAGTCT CAAGGTTGCA AGGCACACCA
3850
GAGGTGGAAG TGATCTAGCA GGACTTAGTG GGGATGTGGG GAGCAGGGAC
3900
ACA
G
G
C
A
G
G
A
G
G
T
G
A
A
C
C
T
G
G
T
T
T
T
C
T
C
T
C
T
A
C
A
G
T
A
T
A
T
C
C
A
G
A
A
C
C
T
G
3950 |
REPEAT
G
G
A
T
G
G
T
G
C
A
G
G
G
T
A
A
A
T
G
G
T
A
G
G
G
A
A
T
A
A
A
T
G
A
A
T
G
A
A
T
G
TGCTTTCCA
4000
AGACTGATTG TAGAACTAAA ATGAGTTGTA AGGCGTCCCC TGGAAGAAGG
4050
GCAGTGTGGG AACCTGTAAC TAGGTTCCTG CCCAGCCTGT GAGAAGAATT
4100
TGGCAGATCA ATCTCATTGC CAGTATAGAG AGGAAGCCAG AAACCCTCTC
4150
TGCCAAGGCC TGCAGGGGTT CTTACCCCAC CTGACCCTGC ACCATAACAA
4200
AAGGAACAGA GAGACACTGG TAGGGCAGTC CCATTAGAAA GACTGAGTTC
4250
CGTATTCCCG GGGGCAGGGC AGCACCAGGC CGCACAACAC TCCATTCTGC
4300
CTGCTTATGG CTATCAGTAG CATCACTAGA GATTCTTCTG TTTGAGAAAA
4350
CTTCTCAAGG ATCCAGAAAA TATGCTCTTT AAAATATTTT AAAACTGATA
4400
TAGACCCAAA GGAGAGACCC
A
G
T
A
A
C
A
A
T
A
T
T
C
A
G
C
T
A
T
A
T
T
A
TCCATTC
4450 |
var(4421):[-:0.12]
TCTCT
T
T
C
T
T
T
C
A
T
T
C
A
A
C
A
A
A
T
C
T
G
T
A
T
T
G
A
T
C
A
C
A
G
G
C
T
C
T
C
T
G
C
T
G
G
4500 |
REPEAT
G
T
G
T
G
G
G
A
T
G
C
A
G
C
T
G
T
G
GG CCTGTGCTGG AGGTCCTTAG AGGCCAGTAC
4550
TCCTATCCTG GGCTTTATCT GCATGGATTG CTGCAGTGTT GGGCTCCACT
4600
GCTGTGTGAA GCAATTGCTC CTGCTCTTTC TGGGCATGGG AGAAGGGTCA
4650
GAGCAGTCGG ACACAGATTC CCAGGCAGGA GAATGGAACT CCTTCCGAGG
4700
AAGAAGACGT GTTTTCCTTC CAGCACACAC CCAGGCATGG TGGTCAGGAC
4750
C
G
TGGACCAG GTCCCCAACT TGTGCATGCA CCAAGCCCCA GGATCAGGAG
4800 |
var(4752):[C:0.04]
CAGAGCTAGT GAGGGAGCAA GATGGATGAG GACAGCACGG TGCTGACCAC
4850
TCTAGACAGA CAGGAGACAG GAAACAGGAA ACTCAACTTG CAAAAAGACT
4900
GAATCTCAAC TTGATTCAAT TAGGCAGA
T
A
C
T
G
A
G
T
T
C
C
A
G
T
A
T
A
C
T
C
C
A
4950 |
REPEAT
|
var(4938):[T:0.03]
G
G
A
C
T
A
T
T
C
T
A
G
G
G
G
C
T
A
G
G
A
T
T
C
A
A
C
A
G
T
G
A
A
T
A
A
A
A
C
A
G
A
C
A
A
A
A
T
C
C
5000
T
T
T
C
C
C
T
T
G
T
A
C
A
C
T
T
A
T
A
T
C
C
T
CTCAAAA AAGCTCCTTT CCCCTCTTTC
5050
TTATCAGGGT CTAATATAGT TAATAAGGAC TTAAGACTGG AATATCACAT
5100
CTAAATCCCC AATAATGAGC CCTCACCAAT CTGCCAGGTC CCAGAGAAGC
5150
TAAAAACAAT CAGGGCTGTT TGCAACTAAC TGAAAT