IL3 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
CAAATGCACT GAATCACTGA GGATCTTATC AAAATGCGA
T
T
T
T
T
G
A
T
T
C
A
50 |
REPEAT
G
A
A
A
G
T
C
T
G
G
G
C
T
G
G
G
G
C
C
T
G
A
G
G
G
T
T
G
A
C
A
C
C
G
C
T
A
A
C
A
A
G
C
T
C
C
C
G
G
G
100
C
A
G
G
G
C
T
G
A
C
C
T
G
C
A
G
G
T
C
T
G
G
G
A
C
C
A
C
A
G
G
A
A
G
G
G
T
A
G
C
A
A
G
A
C
T
G
G
A
A
150 |
REPEAT
A
T
C
T
G
T
C
T
C
C
T
C
A
C
A
A
G
A
C
T
G
A
G
C
T
G
C
T
A
G
T
G
G
A
G
G
T
T
A
C
C
A
T
G
T
C
T
G
T
T
200
T
T
A
T
T
C
A
C
A
G
C
A
A
G
T
G
C
T
T
T
G
T
A
G
A
C
G
T
C
T
G
T
T
G
A
A
T
G
A
A
T
TGTGCCTAC
250
GGAGTACGCA AGCTGGTGCT AAG
G
CTCCCC TCTGTGTGTT GAGTT
G
TGCC
300 |
var(274):[T:0.01]
|
var(296):[A:0.01]
TGTCAGACTC CACTCCGGGT CCAGAACCTA GGGCTCTTCC TGGTCCA
G
GG
350 |
var(348):[T:0.01]
CCCAGCCTGG GGCTGAGCCA GGAGGGCATA TCAGCTACAG AAATCATCCT
400
CACAGCATGG CCTTGAGTCA CAGCCTCTTC ACCTGCCTCC CCACAGCCAC
450
ATCCTGGTCC TTGTCTTCAC CTGATCTGCT TATGCTCAGA AGCCCAAAGC
500
ACCCAAATTC CGCTGCCTCA GCATAACCTC CTATCCCGCA TCCCCCACAC
550
TGATCACAAC ACACCGCACC ATGACCCAGA CCCTGGCCTT TCCTTACTGC
600
TCTCCTCTCC CTCCCACCCG GGGCCA
G
TCA TCTTGAAGAA GTCTTCCACA
650 |
var(627):[A:0.06]
TGCCCCTGTC ACACTCATCC CTTTACCAAA AGCCCCTACC CCATGGGGTG
700
GGTCAGGCAG GCCCCAAGAC AGGCCCGTAT CAGGAGGACC CCTCTTCTCT
750
CAGGGGCTGC CCTCTGGGAT AACCACCCCC GCCCTTCTGG GTTTCCTGCT
800
TCCTATCTGG CTGCAGTTTC TCAGGTCCCT TGTGGATTTC CCCATGGTCT
850
GTCCCCACTC ACATCCCCTC TCTGCAAACC TTGCCTACTG GGCCTGCACC
900
TGGCAAATCC ATGCTCAGCA CAGACGGGGA TCAAGACCTC TCAATACAAC
950
TGTCTCCTGC CAATCCCTGC CCCAGCAGCC TGAGGCCCAG TCTGAAACCA
1000
GGGAGTTGCT CTCCTTTCTC CTCCCTTGAC CTCACCCCTC AGACCATGCC
1050
AATTCTGCCT CCTAAACCTC CCAGGCCAGC CCCTCCCCCA GCTCCCAGTG
1100
ACAGTGTCCT CAGGTACCTG AGCTCAGCTC TCGGTGCTAC CAGAGGGACT
1150
GCCAGGGGCT GCAGCCGGGC CTCCTGCAGA GGCTGAGTCC CACACGCAGG
1200
GAACAGCCAT GCCACTGC
T
A GCAGACCAGT AAGAGAATGG CCACCTGGGG
1250 |
var(1219):[C:0.09]
CCTGAGCGCC CTCGGCCATC CACCAGAAAC AAAGTGTCAA GGAGAAGCTG
1300
CC
C
GAAGCCC ATGGGACAAA CCACTGGGGA CTGGAACACC AGTAATTCTG
1350 |
var(1303):[T:0.01]
TATTGGGAAG CGGCACCAAG AGATGTGCTT CTCAGAGCCT GAGGCTGAAC
1400
GTGGATGTTT AGCAGCGTGA CCGGCTACCA GACAAACTCT CATCTGTTCC
1450
AGTGGCCTCC TGGCCACCCA CCAGGACCAA GCAGGGCGGG CAGCAGAGGG
1500
CCAGGGTAGT CCAGGTGATG GCAGATGAGA TCCCACTGGG CAGGAGGCCT
1550
CAGTGAGCTG AGTCAGGCTT CCCCTTCCTG CCACAGGGGT CCTCTCACCT
1600
GCTGCCATGC TTCCCATCTC TCATCCTCCT TGACAAGATG AAGTGATACC
1650
GTTTAAGTAA TCTTTTTTCT TGTTTCACTG ATCTTGAGTA CTAGAAAGTC
1700
ATGGATGAAT AATTACGTCT GTGGTTTTCT ATGGAGGTTC CATGTCAGAT
1750
AAAGATCCTT CCGACGCCTG CCCCACACCA CCACCTCCCC CCGCCTTGCC
1800
CGGGGTTGTG GGCACCTTGC TGCTGCACAT ATAAGGCGGG AGG
C
TGTTGC
1850 |
var(1844):[T:0.19]
CAAC
T
CTTCA GAGCCCCACG AAGGACCAGA ACAAGACAGA GTGCCTCCTG
1900 |
var(1855):[G:0.01]
C
C
G
A
T
C
C
A
A
A
C
A
T
G
A
G
C
C
G
C
C
T
G
C
C
C
G
T
C
C
T
G
C
T
C
C
T
G
C
T
C
C
A
A
C
T
C
C
T
G
1950 |
var(1902):[T:0.01]
| Exon 1 |
UTR
M S R L P V L L L L Q L L 13
G
T
C
C
G
C
C
C
C
G
G
A
C
T
C
C
A
A
G
C
T
C
C
C
A
T
G
A
C
C
C
A
G
A
C
A
A
C
G
C
C
C
T
T
G
A
A
G
A
C
2000 |
var(1955):[A:0.01]
|
var(1990):[T:0.37]
V R P G L Q A P M T Q T T P L K T 30
A
A
G
C
T
G
G
G
T
T
A
A
C
T
G
C
T
C
T
A
A
C
A
T
G
A
T
C
G
A
T
G
A
A
A
T
T
A
T
A
A
C
A
C
A
C
T
T
A
A
2050
S W V N C S N M I D E I I T H L 46
A
G
C
A
G
C
C
A
C
C
T
T
T
G
C
C
T
T
T
G
C
T
G
GTGAGTA GCTTGGATAA GACTGGCCTG
2100
K Q P P L P L L 54
CAGCAGTGAG GGGTGGTGGC TGCCTAAGGC CAAAAGGCCT CATGGGCCTT
2150
TCTCTCCCTT CACCCCCACA G
G
A
C
T
T
C
A
A
C
A
A
C
C
T
C
A
A
T
G
G
G
G
A
A
G
A
C
C
A
2200 | Exon 2
D F N N L N G E D Q 64
A
G
A
C
A
T
T
C
T
G
A
T
G
GTAAGAG CTCAGCCC
G
T
G
G
A
T
C
C
C
G
A
T
C
C
A
C
T
T
C
C
T
G
2250 |
var(2229):[A:0.01]
|
REPEAT
D I L M 68
C
C
T
G
G
G
T
G
A
C
T
T
C
A
G
C
C
A
T
G
T
C
A
T
T
C
C
A
T
C
T
T
A
C
C
T
A
G
C
C
T
T
G
C
T
T
T
C
T
T
2300
C
A
T
C
T
G
T
A
A
A
A
T
A
G
G
G
T
T
A
A
T
A
G
C
A
C
C
T
A
T
C
T
C
A
G
T
G
G
G
A
T
T
G
T
T
A
T
G
A
C
2350
A
A
T
C
A
A
A
T
G
G
C
A
C
A
A
T
G
T
G
C
A
T
G
T
T
C
T
G
G
C
C
C
A
G
C
A
T
C
T
G
G
C
A
C
T
T
A
A
G
A
2400
G
T
T
C
A
A
T
A
C
A
T
G
GCCACAGC CATGGCTATA ATAATGAAAA TGACTTTTAA
2450
ATTAGAAAAT GAAAAGGCAG TTCTAGGTGA GGAATACCAA GGGCCTTAAG
2500
GTCAGTGTTT GGTAGGGCAG ACTCTGGACT GACAGACAGA AATTTCCCCC
2550
TCAGA
T
G
T
G
C
C
A
G
C
T
T
C
T
T
T
T
T
C
C
C
T
T
A
A
A
A
A
A
T
T
G
A
G
T
T
T
G
T
G
T
T
T
T
C
C
2600 |
REPEAT
A
C
C
C
T
C
A
T
T
G
G
C
T
G
T
G
G
C
A
T
T
A
T
C
A
T
T
T
A
C
A
G
T
T
A
T
T
T
T
T
C
A
T
G
G
T
T
C
C
A
2650
G
T
T
G
G
T
T
G
C
A
G
T
T
G
T
T
C
T
G
T
C
T
C
A
C
C
T
T
T
G
C
A
T
G
A
C
A
T
T
T
C
T
T
G
G
G
T
C
A
A
2700
A
C
A
A
G
A
A
G
T
G
G
A
A
G
C
C
T
T
T
G
C
T
G
A
G
T
T
C
C
T
G
G
G
C
C
A
T
C
T
G
T
G
T
T
T
G
G
G
G
C
2750 |
var(2714):[A:0.22]
A
C
T
C
A
C
A
G
C
T
C
A
C
A
T
G
C
T
G
C
A
C
C
C
A
T
T
T
C
C
A
T
G
C
T
G
G
G
G
T
C
T
C
T
G
T
G
A
T
T
2800
T
T
C
T
T
C
T
T
G
A
T
T
T
C
T
A
G
G
A
G
A
C
T
T
T
A
A
T
T
C
A
G
T
C
A
G
G
G
C
A
T
G
A
ACACTGT
2850
TATCAGCCTC TGAGCTACAA ATACTTCCCT TGGAAAACCC CCTGTCTTTT
2900
GTAGAGCTTC TTTTTGGAGA TATTTTTTCC CCCCAAGTGC AGAAAGATCC
2950
ACCTAGGTAC CCCCTTCCCC ACCCAA
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
A
C
A
A
G
3000 |
REPEAT
A
G
T
C
T
C
A
C
T
C
T
G
T
T
G
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
C
A
C
G
A
T
C
T
C
A
G
C
T
C
A
3050
C
T
G
C
T
A
C
C
T
C
T
G
C
C
T
C
C
T
G
A
G
T
T
C
A
A
G
C
A
A
T
T
C
T
C
C
T
G
T
C
T
C
A
G
C
C
T
C
C
C
3100 |
var(3062):[A:0.01]
A
A
G
T
A
G
C
T
A
G
G
A
T
T
A
C
A
G
G
C
A
T
G
C
A
C
C
A
C
C
A
C
T
C
C
C
A
T
T
T
T
T
G
T
A
T
T
T
T
T
3150 |
var(3129):[T:0.01]
A
G
T
A
G
A
G
A
C
G
G
G
G
T
T
T
C
A
C
C
A
T
A
T
T
G
G
T
C
A
G
G
C
T
G
G
T
C
T
T
G
A
A
C
T
C
G
A
C
C
3200
T
C
A
G
G
T
T
A
T
C
T
G
C
C
T
G
C
C
T
C
G
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
T
T
3250
G
A
G
C
C
A
C
T
G
C
G
C
C
C
A
G
C
C
CA CCTAGGCCCT TTATGTAGCT CAAATGGAGC
3300
CAGAGACTGG GGGCTTGAGG AAACCAGGTC CTGCCTGCCA CTCACTTCTA
3350
GGCCTGTGCC CTTGGGCAGG GACCCACCTG AGGCAAGAAC GGGACTAGGA
3400
GGGAA
C
CCGA GGATGTCCCC AACAGTGGGC TTGGGAAACT GTGGGGGTGA
3450 |
var(3406):[G:0.09]
CTTCCACCTG CTTGTGGGAG GGATACTCTG TAACCTTTCC CCCTTAAGTG
3500
TATTCTCTGC CCCGTTAG
G
A
A
A
A
T
A
A
C
C
T
T
C
G
A
A
G
G
C
C
A
A
A
C
C
T
G
G
A
G
G
C
3550 | Exon 3
E N N L R R P N L E A 79
A
T
T
C
A
A
C
A
G
G
G
C
T
G
T
C
A
A
G
A
G
T
T
T
A
C
A
G
A
A
C
G
C
A
T
C
A
G
C
A
A
T
T
G
A
G
A
G
C
A
3600
F N R A V K S L Q N A S A I E S 95
T
T
C
T
T
A
A
A
GT ATGTGAAGCT GTTGAGGGTT TGGGATCCCT GTGTTGGCCC
3650
I L K 98
T
GCCCTGCCT CTGGGGAGGA GAGCAGGGCC CACTCCCTTT CCAAGGGAAT
3700 |
var(3651):[A:0.03]
CTCTGACCAT CTGCTTTGGT CTCTTTCCAC AG
A
A
T
C
T
C
C
T
G
C
C
A
T
G
T
C
T
G
3750 | Exon 4
N L L P C L 104
C
C
C
C
T
G
G
C
C
A
C
G
G
C
C
G
C
A
C
C
C
A
C
G
GTAAGC TGTCCCCCAA GATGCCCGTC
3800
P L A T A A P T 112
ATGGCTTGCT CCTCAGCTGG TCATCACCAT TACAGCCTGG ACTCACCTAA
3850
TGCCACCTTC TTGGTTTCTT TATAG
C
G
A
C
A
T
C
C
A
A
T
C
C
A
T
A
T
C
A
A
G
G
A
C
G
3900 | Exon 5
R H P I H I K D 120
G
T
G
A
C
T
G
G
A
A
T
G
A
A
T
T
C
C
G
G
A
G
G
A
A
A
C
T
G
A
C
G
T
T
C
T
A
T
C
T
G
A
A
A
A
C
C
C
T
T
3950
G D W N E F R R K L T F Y L K T L 137
G
A
G
A
A
T
G
C
G
C
A
G
G
C
T
C
A
A
C
A
G
A
C
G
A
C
T
T
T
G
A
G
C
C
T
C
G
C
G
A
T
C
T
T
T
T
G
A
G
T
4000 |
UTR
E N A Q A Q Q T T L S L A I F 152
C
C
A
A
C
G
T
C
C
A
G
C
T
C
G
T
T
C
T
C
T
G
G
G
C
C
T
T
C
T
C
A
C
C
A
C
A
G
A
G
C
C
T
C
G
G
G
A
C
A
4050
T
C
A
A
A
A
A
C
A
G
C
A
G
A
A
C
T
T
C
T
G
A
A
A
C
C
T
C
T
G
G
G
T
C
A
T
C
T
C
T
C
A
C
A
C
A
T
T
C
C
4100
A
G
G
A
C
C
A
G
A
A
G
C
A
T
T
T
C
A
C
C
T
T
T
T
C
C
T
G
C
G
G
C
A
T
C
A
G
A
T
G
A
A
T
T
G
T
T
A
A
T
4150
T
A
T
C
T
A
A
T
T
T
C
T
G
A
A
A
T
G
T
G
C
A
G
C
T
C
C
C
A
T
T
T
G
G
C
C
T
T
G
T
G
C
G
G
T
T
G
T
G
T
4200 |
var(4193):[A:0.01]
T
C
T
C
ATTTTT ATCCCATTGA GACTATTTAT
T
TATGTATGT ATGTATTTAT
4250 |
var(4231):[G:0.01]
TTATTTATTG CCTGGAGTGT GAACTGTATT TATTTTAGCA GAGGAGCCAT
4300
GTCCTGCTGC TTCTGCAAAA AACTCAGAGT GGGGTGGGGA GCATGTTCAT
4350
TTGTACCTCG AGTTTTAAAC TGGTTCCTAG GGATGTGTGA GAATAAACTA
4400
GACTCTGAAC AACTGCTTTG TTACCAGTGT CTCAATTTGA CTTGGGACTT
4450
AGTGACCATT TTAAGGGAGA CTGGTGTGCC ACAAATCCTG GGTGGCTTGA
4500
TCCTGCCACG TGGATGCTGT CTGGGTGAGC TTGTTCTCAC ACTGCCCTCC
4550
TGCCACCCCC ATTTCCAGAA AGGTGATGAT AA
C
CCTAGCA ATCTTGAAAA
4600 |
var(4583):[A:0.01]
TCCACAGAAC TGCTACCAGG TACCAGGAGC CGTTCTGAGC ATTTTACCTA
4650
TGCTATCTAA CTTATTCCTC ACCCCAACCA AGAGTA
T
G
T
T
T
T
C
T
C
C
G
T
T
T
4700 |
REPEAT
C
A
T
G
G
G
A
A
A
C
T
G
A
A
G
T
T
C
G
G
C
C
T
G
G
T
T
G
A
G
C
A
A
C
T
G
C
C
T
A
A
G
C
T
G
A
T
A
G
T
4750 |
var(4718):[T:0.01]
|
var(4725):[A:0.02]
G
G
C
C
C
A
G
C
T
G
G
G
G
C
T
T
G
A
A
T
T
C
A
G
G
T
C
C
C
T
G
TGGTCTGGA GCATGCTAAT
4800 |
var(4775):[C:0.01]
CCTGTGGCAT GTCTCCCCCT AGTGGTCCTT CCAGAAACTG CAGC
C
GCCGC
4850 |
var(4845):[T:0.02]
CCCTGCTCCT CCCAGGGCCA ACATCAGGGA TCAACA
T
CCC CTGA
C
CCCCT
4900 |
var(4887):[C:0.02]
|
var(4895):[T:0.02]
CAAGG
C
A
G
C
A
G
G
T
T
C
T
G
C
T
G
A
C
A
C
A
A
G
C
C
A
C
C
C
A
A
T
T
C
T
T
C
A
T
T
C
C
A
T
T
C
4950 |
REPEAT
C
T
T
T
A
A
A
A
C
C
C
T
C
C
A
A
G
C
C
T
G
G
A
G
T
C
T
C
C
A
C
C
C
C
T
G
C
C
T
A
A
G
C
C
C
C
C
A
G
C
5000 |
var(4994):[T:0.02]
C
T
C
T
C
C
T
G
C
C
T
G
A
T
G
A
T
T
T
A
G
C
A
G
C
C
A
C
C
C
T
G
T
A
G
G
C
C
T
C
C
C
G
G
C
C
A
G
C
C
5050
C
T
G
G
A
A
C
C
C
A
C
A
C
C
C
T
G
A
C
G
A
T
C
T
G
T
G
C
T
C
T
A
C
T
G
G
G
G
A
G
C
C
A
G
A
T
G
G
A
G
5100
T
T
T
T
A
G
A
A
A
A
T
G
C
A
A
A
T
C
T
G
A
C
C
A
T
G
T
G
G
A
T
C
T
A
T
A
C
T
G
A
A
T
C
C
C
C
C
A
G
T
5150
C
C
T
C
G
G
G
G
T
C
T
T
C
T
G
G
A
C
C
T
T
G
T
C
C
A
T
A
T
C
C
T
T
A
G
G
A
C
A
A
C
G
T
A
T
A
A
G
G
C
5200
T
C
A
C
C
T
C
C
A
T
C
T
G
T
T
G
C
T
T
C
T
G
T
T
T
C
C
C
C
C
A
T
G
G
C
T
A
C
C
A
C
C
C
T
A
A
T
C
A
A
5250
T
G
C
T
C
C
A
G
C
C
A
A
C
A
G
G
A
G
T
G
C
T
G
G
G
A
C
T
T
C
C
T
A
G
A
C
A
G
C
C
T
T
C
C
A
T
G
A
A
G
5300 |
var(5295):[G:0.06]
C
C
T
C
T
C
T
T
C
A
T
G
C
C
C
T
G
G
A
G
C
T
T
C
T
A
T
C
C
A
C
A
T
T
G
T
C
A
C
C
T
C
A
G
T
C
T
G
G
C
5350
A
T
G
C
C
C
T
T
A
C
T
T
G
G
C
T
T
G
A
T
G
A
G
T
T
C
C
T
A
T
T
C
C
A
T
G
G
A
C
C
A
A
C
T
C
A
A
A
C
T
5400
C
T
G
C
C
C
A
C
C
T
C
T
G
G
A
C
T
G
T
C
C
A
C
A
C
C
A
T
C
C
C
A
G
G
A
T
G
G
G
G
C
C
C
T
C
C
T
C
C
G
5450
AAATAGGTGG GTACACAGGG ACCCACTGGA GGGACAGCCA CTGTGGCACG
5500
GAGGTGGTGC AGACCAGCCT GGAGGCAGAA GGCAGGAGGC TGGGACATCC
5550
CGAGTGTGGC TTCAGTCTAC CACCTGGCCC TTTAGCCCTG AGTGCCCCCC
5600
TCTAACTCCC CTGCACACCA CCCTGTGGCC CTACTCAGTC TGCCAGTGGA
5650
AGGAGGGGCA GAGGGGCCTT CCTCTGTCAC CACGTAAGCA GCAATAGCAT
5700
CCTCTCTGAT TCCTCTCAAG TCCCAGAAAA GCGTCAGAGG CTGACACCAG
5750
GTGCAGGGGT CCTGTCCCCC TTTTTCCTGT TTTCCACCTT GATCCATCCC
5800
TCCCTTGAGG TTATGAATAA GGAACAGCCC GGCTGCTTGA ATGGGACTGG
5850
AGATGA
T
GGA AGATTTATCT GCTACAGGCT CAGAACTCTA TTTCCCTAAA
5900 |
var(5857):[C:0.02]
TTCTTCCCCC TAAAAAATCG TTATGTTCCC ACAGAAGAAC TCTCTT
T
TCC
5950 |
var(5947):[C:0.36]
CCCTCCCCCC ACCTCTCCCC AGCCTGGCTC ACTGAGGGCA TTGCCTGGGG
6000
ACCAGGGGAT GTCTGTTGTT GGACTTAGCC TGGGAGGAGA TACAGAGGAT
6050
GCTGCTGCAG TTTCTGGATT GACCACTAGG GGGAGGTGTG TGCCACTGGT
6100
CTCAGGGCAC TTCAGAGGTC CTGGAGGAGC CAGGCCTGAG AGGGTAGGGT
6150
GAGAGGTCTG ACTCTGGACT GGGTTTCCCA AGTCTCCTGC ACACCCAGCT
6200
CCCCCCAGCC CTCACTTTCC CTCCCTCTCG CACGTGACAG CTAGTCCTGT
6250
TTTCATCCTG GGCTGAGGCA GCATTTGTGC CCCAGCCCCA TGTTCCCAGA
6300
TGAGTCGCTG CTTGCCACCT CCTCTTCACA CCCTGGAGAG TGGGTCAGCA
6350
GCTGTCTCCT CTGCTGGTCC TGTGTTAGTG ACTGATG