Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000587 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001039 00071 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001134 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001426 00000 ------------ A 0.56 0.66 0.61 T 0.44 0.34 0.39 0000 --- --- --- --- 001638 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002000 00000 ------------ C 0.94 0.67 0.81 A 0.06 0.33 0.19 0000 --- --- --- --- 002014 00000 ------------ G 0.54 0.67 0.61 A 0.46 0.33 0.39 0000 --- --- --- --- 002121 00000 ------------ C 0.77 0.68 0.73 T 0.23 0.32 0.27 0000 --- --- --- --- 002329 00000 ------------ C 0.54 0.68 0.61 T 0.46 0.32 0.39 0000 --- --- --- --- 002395 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 002445 00000 ------------ C 0.80 0.65 0.73 T 0.20 0.35 0.27 0000 --- --- --- --- 002493 00000 ------------ C 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 002586 00000 ------------ A 0.60 0.63 0.62 G 0.40 0.37 0.38 0000 --- --- --- --- 002598 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002686 00000 ------------ C 0.77 0.63 0.70 T 0.23 0.37 0.30 0000 --- --- --- --- 002689 00000 ------------ - 0.81 1.00 0.90 + 0.19 0.00 0.10 0000 --- --- --- --- 002746 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003074 00000 ------------ G 0.82 1.00 0.91 C 0.18 0.00 0.09 0000 --- --- --- --- 003581 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003670 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003764 00000 ------------ T 0.98 0.76 0.87 C 0.02 0.24 0.13 0000 --- --- --- --- 003781 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 004077 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004175 00000 ------------ C 0.85 0.74 0.79 T 0.15 0.26 0.21 0000 --- --- --- --- 004267 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004287 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004341 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004736 00000 ------------ C 0.58 0.71 0.64 T 0.42 0.29 0.36 0000 --- --- --- --- 004893 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 004916 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 004939 00000 ------------ C 0.69 0.75 0.72 T 0.31 0.25 0.28 0000 --- --- --- --- 005022 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005034 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005063 00000 ------------ T 0.60 0.72 0.66 A 0.40 0.28 0.34 0000 --- --- --- --- 005106 00000 ------------ C 0.88 0.74 0.81 G 0.12 0.26 0.19 0000 --- --- --- --- 005125 00000 ------------ T 0.71 0.75 0.73 C 0.29 0.25 0.27 0000 --- --- --- --- 005241 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005335 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 005808 00000 ------------ - 0.84 0.74 0.79 + 0.16 0.26 0.21 0000 --- --- --- --- 005921 00000 ------------ - 0.85 1.00 0.93 + 0.15 0.00 0.07 0000 --- --- --- --- 006170 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 006214 00000 ------------ T 0.76 0.74 0.75 C 0.24 0.26 0.25 0000 --- --- --- --- 006379 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006817 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 006976 00000 ------------ C 0.75 1.00 0.88 T 0.25 0.00 0.12 0000 --- --- --- --- 007226 00000 ------------ A 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 007742 00000 ------------ G 0.90 0.80 0.85 C 0.10 0.20 0.15 0000 --- --- --- --- 007751 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 007811 00000 ------------ G 0.62 0.78 0.70 A 0.38 0.22 0.30 0000 --- --- --- --- 007952 00000 ------------ T 0.76 1.00 0.89 C 0.24 0.00 0.11 0000 --- --- --- --- 008431 00379 NON-SYN C 0.88 1.00 0.94 T 0.12 0.00 0.06 0083 TCC TTC SER(S) PHE(F) 008611 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 008655 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 008672 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008799 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008980 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009093 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 009191 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009378 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009406 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009425 00000 ------------ A 0.38 0.65 0.51 G 0.62 0.35 0.49 0000 --- --- --- --- 009685 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009705 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009876 00000 ------------ C 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 009881 00000 ------------ C 0.68 0.35 0.51 G 0.32 0.65 0.49 0000 --- --- --- --- 010216 00000 ------------ - 0.30 0.64 0.47 + 0.70 0.36 0.53 0000 --- --- --- --- 010998 00000 ------------ T 0.39 0.66 0.52 C 0.61 0.34 0.48 0000 --- --- --- --- 011167 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 011452 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 011475 00000 ------------ G 0.83 0.72 0.78 A 0.17 0.28 0.22 0000 --- --- --- --- 011503 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011618 00000 ------------ G 0.71 0.71 0.71 C 0.29 0.29 0.29 0000 --- --- --- --- 011876 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 011970 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 011999 00000 ------------ C 0.44 0.65 0.54 T 0.56 0.35 0.46 0000 --- --- --- --- 012145 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012212 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 012407 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012912 00000 ------------ C 0.59 0.68 0.63 T 0.41 0.33 0.37 0000 --- --- --- --- 013080 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 013151* 013160 00000 ------------ G 0.48 0.68 0.57 C 0.52 0.32 0.42 0000 --- --- --- --- 013382 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013416 00000 ------------ C 0.98 0.82 0.90 G 0.02 0.18 0.10 0000 --- --- --- --- 013628 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013660 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 013803 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 013878 00000 ------------ G 0.67 0.91 0.78 A 0.33 0.09 0.23 0000 --- --- --- --- 013992 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014181 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 014247 00000 ------------ G 0.65 0.67 0.66 A 0.35 0.33 0.34 0000 --- --- --- --- 014281 00000 ------------ A 0.57 0.68 0.62 G 0.43 0.33 0.38 0000 --- --- --- --- 014432 00000 ------------ G 0.79 0.93 0.86 A 0.21 0.07 0.14 0000 --- --- --- --- 014505 00000 ------------ C 0.79 0.93 0.86 T 0.21 0.07 0.14 0000 --- --- --- --- 014691 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 014739 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 014774 00000 ------------ T 0.79 0.93 0.86 C 0.21 0.07 0.14 0000 --- --- --- --- 014856 00000 ------------ C 0.96 0.73 0.85 A 0.04 0.27 0.15 0000 --- --- --- --- 014876 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014885 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 014912 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014978 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 015091 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015425 00000 ------------ C 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 015510 00881 SYNON C 0.67 0.62 0.64 T 0.33 0.38 0.36 0250 GGC GGT GLY(G) GLY(G) 015657 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015829 00000 ------------ G 0.69 0.63 0.66 A 0.31 0.37 0.34 0000 --- --- --- --- 015847 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015910 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016132 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016183 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016317 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016431 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016614 00000 ------------ T 0.90 0.76 0.83 C 0.10 0.24 0.17 0000 --- --- --- --- 016684 00000 ------------ C 0.81 0.93 0.87 A 0.19 0.07 0.13 0000 --- --- --- --- 016863 00000 ------------ G 0.97 0.69 0.85 A 0.03 0.31 0.15 0000 --- --- --- --- 016885 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017024 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 017044 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017045 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017062 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017148 00000 ------------ T 0.40 0.64 0.52 C 0.60 0.36 0.48 0000 --- --- --- --- 017220 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017222 00000 ------------ C 0.80 0.64 0.72 T 0.20 0.36 0.28 0000 --- --- --- --- 017598 00000 ------------ G 0.89 0.93 0.91 A 0.11 0.07 0.09 0000 --- --- --- --- 018254 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 018340 00000 ------------ C 0.73 0.70 0.71 T 0.27 0.30 0.29 0000 --- --- --- --- 018370 00000 ------------ T 0.73 0.67 0.70 C 0.27 0.33 0.30 0000 --- --- --- --- 018373 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018376 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 018398 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 018584 00000 ------------ A 0.73 0.71 0.72 C 0.27 0.29 0.28 0000 --- --- --- --- 018712 00000 ------------ T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 018848 00000 ------------ G 0.85 0.70 0.78 A 0.15 0.30 0.22 0000 --- --- --- --- 018906 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 018920 00000 ------------ T 0.75 0.65 0.70 C 0.25 0.35 0.30 0000 --- --- --- --- 018930 00000 ------------ A 0.73 0.70 0.72 G 0.27 0.30 0.28 0000 --- --- --- --- 019983 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020417 00000 ------------ C 0.72 0.76 0.74 T 0.28 0.24 0.26 0000 --- --- --- --- 020587 00000 ------------ C 0.68 0.71 0.70 T 0.32 0.29 0.30 0000 --- --- --- --- 020599 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 021066 00000 ------------ A 0.50 0.67 0.59 G 0.50 0.33 0.41 0000 --- --- --- --- 021215 00000 ------------ T 0.61 0.67 0.64 C 0.39 0.33 0.36 0000 --- --- --- --- 021437 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 021576 00000 ------------ A 0.64 0.67 0.65 G 0.36 0.33 0.35 0000 --- --- --- --- 021626 00000 ------------ A 0.64 0.67 0.65 G 0.36 0.33 0.35 0000 --- --- --- --- 021738 00000 ------------ A 0.65 0.83 0.74 G 0.35 0.17 0.26 0000 --- --- --- --- 022327 01304 NON-SYN C 0.92 0.83 0.88 A 0.08 0.17 0.12 0391 GAC GAA ASP(D) GLU(E) 022854 01831 3' UTR C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 022902 01879 3' UTR C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 022938 01915 3' UTR G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 023225 02202 3' UTR G 0.50 0.66 0.58 C 0.50 0.34 0.42 0000 --- --- --- --- 023254 02231 3' UTR A 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 023282 02259 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023345 02322 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023456 02433 3' UTR T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023515 02492 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023640 02617 3' UTR T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023918 02895 3' UTR A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 024181 03158 3' UTR A 0.82 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 024655 03632 3' UTR T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 024949 03926 3' UTR A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 025013 03990 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025284 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025468 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025583 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025699 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025735 00000 ------------ G 0.92 0.87 0.89 A 0.08 0.13 0.11 0000 --- --- --- --- 025975 00000 ------------ A 0.72 0.74 0.73 C 0.28 0.26 0.27 0000 --- --- --- --- 026051 00000 ------------ G 0.68 0.62 0.65 C 0.33 0.38 0.35 0000 --- --- --- --- 026092 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 026156 00000 ------------ - 0.33 0.17 0.25 + 0.67 0.83 0.75 0000 --- --- --- --- 026189 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002689: AGCATC 005808: A 005921: T 009705: C 010216: AACC 026156: G The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 013151 A 0.07 0.00 0.04 C 0.45 0.68 0.56 G 0.48 0.32 0.40