Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000587 C 1 0 1 T 47 44 91 001039 T 1 0 1 C 47 44 91 001134 G 2 0 2 A 46 44 90 001426 T 21 15 36 A 27 29 56 001638 A 0 2 2 G 48 44 92 002000 A 3 15 18 C 45 31 76 002014 A 22 15 37 G 26 31 57 002121 T 11 14 25 C 37 30 67 002329 T 22 14 36 C 26 30 56 002395 A 1 1 2 C 45 43 88 002445 T 9 16 25 C 37 30 67 002493 T 2 1 3 C 42 45 87 002586 G 16 17 33 A 24 29 53 002598 A 2 0 2 G 46 46 92 002686 T 11 17 28 C 37 29 66 002689 + 9 0 9 - 39 46 85 002746 T 0 1 1 C 48 45 93 003074 C 8 0 8 G 36 46 82 003581 G 1 0 1 A 47 46 93 003670 C 0 1 1 G 42 43 85 003764 C 1 11 12 T 45 35 80 003781 T 1 3 4 C 45 43 88 004077 C 0 1 1 T 46 45 91 004175 T 7 12 19 C 39 34 73 004267 A 0 1 1 G 48 45 93 004287 A 1 0 1 G 47 46 93 004341 C 0 1 1 T 46 45 91 004736 T 16 11 27 C 22 27 49 004893 C 1 0 1 G 39 40 79 004916 A 0 1 1 G 40 39 79 004939 T 13 10 23 C 29 30 59 005022 T 2 0 2 C 44 42 86 005034 T 0 1 1 C 46 45 91 005063 A 19 13 32 T 29 33 62 005106 G 6 12 18 C 42 34 76 005125 C 14 11 25 T 34 33 67 005241 G 1 0 1 C 47 46 93 005335 T 5 0 5 G 43 46 89 005808 + 7 12 19 - 37 34 71 005921 + 7 0 7 - 41 46 87 006170 T 2 1 3 C 44 45 89 006214 C 11 12 23 T 35 34 69 006379 T 0 1 1 C 48 45 93 006817 A 4 0 4 G 36 46 82 006976 T 10 0 10 C 30 42 72 007226 G 3 5 8 A 43 39 82 007742 C 5 9 14 G 43 37 80 007751 T 5 9 14 C 43 37 80 007811 A 18 10 28 G 30 36 66 007952 C 10 0 10 T 32 46 78 008431 T 5 0 5 C 37 42 79 008611 G 7 3 10 A 35 37 72 008655 T 3 0 3 C 39 40 79 008672 A 1 0 1 G 41 40 81 008799 T 1 0 1 C 43 42 85 008980 T 1 0 1 C 47 44 91 009093 T 4 0 4 C 44 44 88 009191 C 1 0 1 T 47 44 91 009378 T 0 1 1 C 48 45 93 009406 T 1 0 1 C 47 46 93 009425 G 30 16 46 A 18 30 48 009685 G 4 0 4 A 44 46 90 009705 - 1 0 1 + 47 42 89 009876 T 2 1 3 C 42 45 87 009881 G 14 30 44 C 30 16 46 010216 - 14 27 41 + 32 15 47 010998 C 28 15 43 T 18 29 47 011167 T 3 0 3 C 45 46 91 011452 C 0 3 3 T 48 43 91 011475 A 8 13 21 G 40 33 73 011503 A 1 0 1 G 47 44 91 011618 C 14 12 26 G 34 30 64 011876 C 4 0 4 T 44 46 90 011970 A 2 2 4 G 46 44 90 011999 T 27 16 43 C 21 30 51 012145 T 1 0 1 C 47 42 89 012212 T 4 0 4 C 42 46 88 012407 G 1 0 1 C 43 44 87 012912 T 18 13 31 C 26 27 53 013080 A 0 1 1 G 44 37 81 013151 * 013160 C 22 12 34 G 20 26 46 013382 A 1 0 1 G 45 44 89 013416 G 1 8 9 C 45 36 81 013628 T 1 0 1 C 47 46 93 013660 C 4 0 4 G 44 46 90 013803 G 6 0 6 A 40 38 78 013878 A 15 3 18 G 31 31 62 013992 T 0 1 1 C 46 37 83 014181 T 0 2 2 C 44 38 82 014247 A 14 12 26 G 26 24 50 014281 G 19 13 32 A 25 27 52 014432 A 10 3 13 G 38 43 81 014505 T 10 3 13 C 38 39 77 014691 A 7 0 7 G 41 46 87 014739 A 2 2 4 G 46 44 90 014774 C 10 3 13 T 38 43 81 014856 A 2 12 14 C 46 32 78 014876 C 1 0 1 G 47 44 91 014885 C 2 0 2 G 46 46 92 014912 G 1 0 1 T 47 46 93 014978 A 3 0 3 G 45 46 91 015091 T 3 0 3 C 45 46 91 015425 G 6 0 6 C 36 42 78 015510 T 14 16 30 C 28 26 54 015657 A 4 0 4 G 38 36 74 015829 A 15 17 32 G 33 29 62 015847 A 0 1 1 G 48 45 93 015910 T 2 0 2 C 46 46 92 016132 A 1 0 1 G 47 46 93 016183 T 1 0 1 C 47 46 93 016317 G 3 0 3 C 45 46 91 016431 T 1 0 1 C 47 46 93 016614 C 4 9 13 T 36 29 65 016684 A 8 3 11 C 34 37 71 016863 A 1 10 11 G 39 22 61 016885 T 0 1 1 G 40 41 81 017024 A 5 0 5 G 37 42 79 017044 A 0 1 1 G 40 43 83 017045 T 0 1 1 A 40 43 83 017062 A 0 1 1 G 40 43 83 017148 C 25 16 41 T 17 28 45 017220 A 0 1 1 G 46 43 89 017222 T 9 16 25 C 37 28 65 017598 A 5 3 8 G 41 43 84 018254 C 7 0 7 A 41 46 87 018340 T 13 14 27 C 35 32 67 018370 C 13 15 28 T 35 31 66 018373 T 0 1 1 C 48 45 93 018376 C 6 0 6 T 40 46 86 018398 A 4 0 4 C 42 46 88 018584 C 13 12 25 A 35 30 65 018712 A 4 0 4 T 40 44 84 018848 A 7 14 21 G 41 32 73 018906 C 5 0 5 G 43 46 89 018920 C 12 16 28 T 36 30 66 018930 G 13 13 26 A 35 31 66 019983 G 1 0 1 A 43 40 83 020417 T 11 9 20 C 29 29 58 020587 T 14 11 25 C 30 27 57 020599 T 0 1 1 C 48 37 85 021066 G 23 15 38 A 23 31 54 021215 C 18 15 33 T 28 31 59 021437 T 3 0 3 C 41 40 81 021576 G 16 14 30 A 28 28 56 021626 G 16 14 30 A 28 28 56 021738 G 16 7 23 A 30 35 65 022327 A 4 7 11 C 44 35 79 022854 T 3 0 3 C 43 38 81 022902 T 7 0 7 C 39 38 77 022938 A 1 1 2 G 47 45 92 023225 C 23 15 38 G 23 29 52 023254 C 8 0 8 A 38 44 82 023282 A 1 0 1 C 45 44 89 023345 T 1 0 1 C 45 42 87 023456 A 0 1 1 T 38 43 81 023515 G 1 0 1 T 45 46 91 023640 A 0 1 1 T 38 45 83 023918 G 7 0 7 A 41 46 87 024181 C 7 0 7 A 33 42 75 024655 A 0 2 2 T 48 44 92 024949 G 4 0 4 A 42 46 88 025013 A 1 0 1 C 47 46 93 025284 T 1 0 1 C 45 36 81 025468 T 2 0 2 C 44 40 84 025583 T 1 0 1 C 45 42 87 025699 A 1 0 1 G 47 46 93 025735 A 4 6 10 G 44 40 84 025975 C 13 12 25 A 33 34 67 026051 C 13 16 29 G 27 26 53 026092 C 2 0 2 G 36 40 76 026156 - 15 8 23 + 31 38 69 026189 G 4 0 4 T 42 46 88 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 002689: AGCATC 005808: A 005921: T 009705: C 010216: AACC 026156: g Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 013151 A 3 0 3 G 21 12 33 C 20 26 46