Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000150 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 000422 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 000560 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000606 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000627 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000673 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 000728 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001018 00000 ------------ T 0.90 0.61 0.76 C 0.10 0.39 0.24 0000 --- --- --- --- 001063 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 001193 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001244 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001245 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001246 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 001343 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001519 00000 ------------ G 0.95 0.83 0.89 C 0.05 0.17 0.11 0000 --- --- --- --- 001768 00000 ------------ A 0.95 0.83 0.89 C 0.05 0.17 0.11 0000 --- --- --- --- 001979 00000 ------------ G 0.95 0.83 0.89 A 0.05 0.17 0.11 0000 --- --- --- --- 002060 00000 ------------ G 0.96 0.83 0.89 A 0.04 0.17 0.11 0000 --- --- --- --- 002116 00000 ------------ A 0.96 0.83 0.89 G 0.04 0.17 0.11 0000 --- --- --- --- 002135 00019 5' UTR G 0.96 0.83 0.89 C 0.04 0.17 0.11 0000 --- --- --- --- 002182 00000 ------------ T 0.96 0.83 0.89 C 0.04 0.17 0.11 0000 --- --- --- --- 002304 00000 ------------ C 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- 002324 00000 ------------ A 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- 002443 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002491 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 002587 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002618 00000 ------------ A 0.97 0.83 0.89 T 0.03 0.17 0.11 0000 --- --- --- --- 002620 00000 ------------ - 0.19 0.00 0.09 + 0.81 1.00 0.91 0000 --- --- --- --- 002630 00000 ------------ C 0.97 0.83 0.89 G 0.03 0.17 0.11 0000 --- --- --- --- 002712 00000 ------------ A 0.97 0.83 0.89 G 0.03 0.17 0.11 0000 --- --- --- --- 002732 00000 ------------ C 0.97 0.83 0.89 A 0.03 0.17 0.11 0000 --- --- --- --- 002765 00000 ------------ G 0.47 0.74 0.62 T 0.53 0.26 0.38 0000 --- --- --- --- 002977 00000 ------------ C 0.97 0.83 0.89 T 0.03 0.17 0.11 0000 --- --- --- --- 003040 00000 ------------ T 0.97 0.83 0.89 C 0.03 0.17 0.11 0000 --- --- --- --- 003050 00000 ------------ T 0.97 0.83 0.89 C 0.03 0.17 0.11 0000 --- --- --- --- 003091 00000 ------------ G 0.97 0.83 0.89 A 0.03 0.17 0.11 0000 --- --- --- --- 003254 00000 ------------ G 0.96 0.83 0.89 A 0.04 0.17 0.11 0000 --- --- --- --- 003277 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003331 00000 ------------ A 0.42 0.75 0.58 G 0.58 0.25 0.42 0000 --- --- --- --- 003374 00000 ------------ G 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 003571 00000 ------------ A 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- 003575 00000 ------------ A 0.41 0.75 0.58 G 0.59 0.25 0.42 0000 --- --- --- --- 003778 00000 ------------ A 0.98 0.82 0.90 G 0.02 0.18 0.10 0000 --- --- --- --- 003965 00000 ------------ G 0.98 0.83 0.90 T 0.02 0.17 0.10 0000 --- --- --- --- 004047 00000 ------------ T 0.58 0.91 0.74 G 0.42 0.09 0.26 0000 --- --- --- --- 004090 00000 ------------ G 0.98 0.83 0.90 C 0.02 0.17 0.10 0000 --- --- --- --- 004097 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004265 00000 ------------ A 0.98 0.83 0.90 C 0.02 0.17 0.10 0000 --- --- --- --- 004470 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 004511 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 005848 00000 ------------ G 0.72 0.91 0.82 A 0.28 0.09 0.18 0000 --- --- --- --- 006284 00000 ------------ G 0.98 0.80 0.89 A 0.02 0.20 0.11 0000 --- --- --- --- 006568 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006600 00000 ------------ T 0.71 0.91 0.80 G 0.29 0.09 0.20 0000 --- --- --- --- 006620 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006843 00000 ------------ G 0.82 0.80 0.81 C 0.18 0.20 0.19 0000 --- --- --- --- 007044 00000 ------------ G 0.71 0.91 0.81 A 0.29 0.09 0.19 0000 --- --- --- --- 007194 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007498 00000 ------------ C 0.83 0.80 0.82 T 0.17 0.20 0.18 0000 --- --- --- --- 007601 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007650 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007906 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007916 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 008513 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 008575 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 008576 00000 ------------ - 0.48 0.28 0.38 + 0.52 0.72 0.62 0000 --- --- --- --- 008953 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010234 00000 ------------ A 0.71 0.91 0.81 G 0.29 0.09 0.19 0000 --- --- --- --- 010257 00000 ------------ T 0.90 0.72 0.81 C 0.10 0.28 0.19 0000 --- --- --- --- 010746 00000 ------------ T 0.96 0.80 0.88 C 0.04 0.20 0.12 0000 --- --- --- --- 010753 00000 ------------ G 0.71 0.91 0.81 C 0.29 0.09 0.19 0000 --- --- --- --- 010952 00000 ------------ G 0.67 0.72 0.69 A 0.33 0.28 0.31 0000 --- --- --- --- 011224 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011341 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011645 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011681 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011873 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012136 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012142 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012233 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012319 00000 ------------ G 1.00 0.85 0.93 A 0.00 0.15 0.07 0000 --- --- --- --- 012377 00000 ------------ G 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 012437 00000 ------------ - 0.96 0.80 0.88 + 0.04 0.20 0.12 0000 --- --- --- --- 012508 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012602 00000 ------------ G 0.79 0.91 0.85 A 0.21 0.09 0.15 0000 --- --- --- --- 012695 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 012903 00000 ------------ A 0.52 0.72 0.62 G 0.48 0.28 0.38 0000 --- --- --- --- 012937 00000 ------------ G 0.83 0.80 0.82 A 0.17 0.20 0.18 0000 --- --- --- --- 013027 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013056 00000 ------------ G 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 013328 00000 ------------ T 0.67 0.72 0.69 C 0.33 0.28 0.31 0000 --- --- --- --- 013760 00147 SYNON T 0.96 0.80 0.88 C 0.04 0.20 0.12 0039 GCT GCC ALA(A) ALA(A) 013815 00000 ------------ C 0.96 0.82 0.89 T 0.04 0.18 0.11 0000 --- --- --- --- 013819 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013826 00000 ------------ G 0.96 0.82 0.89 A 0.04 0.18 0.11 0000 --- --- --- --- 013847 00000 ------------ G 0.96 0.82 0.89 C 0.04 0.18 0.11 0000 --- --- --- --- 013888 00000 ------------ T 0.96 0.71 0.84 G 0.04 0.29 0.16 0000 --- --- --- --- 013891 00000 ------------ A 0.96 0.82 0.89 C 0.04 0.18 0.11 0000 --- --- --- --- 013902 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013926 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013929 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 013952 00000 ------------ G 0.96 0.82 0.89 A 0.04 0.18 0.11 0000 --- --- --- --- 014011 00000 ------------ G 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 014036 00000 ------------ C 0.70 0.91 0.80 T 0.30 0.09 0.20 0000 --- --- --- --- 014063 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014225 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 014245 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014356 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 014687 00000 ------------ C 0.95 0.82 0.88 A 0.05 0.18 0.12 0000 --- --- --- --- 015018 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 015023 00000 ------------ C 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- 015110 00000 ------------ G 0.95 0.76 0.86 A 0.05 0.24 0.14 0000 --- --- --- --- 015132 00000 ------------ T 0.84 0.82 0.83 C 0.16 0.18 0.17 0000 --- --- --- --- 015306 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 015346 00000 ------------ A 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 015453 00000 ------------ T 0.77 0.35 0.56 A 0.23 0.65 0.44 0000 --- --- --- --- 015555 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015559 00000 ------------ T 0.93 0.80 0.87 G 0.07 0.20 0.13 0000 --- --- --- --- 015614 00000 ------------ G 0.48 0.72 0.60 A 0.52 0.28 0.40 0000 --- --- --- --- 015653 00000 ------------ C 0.52 0.91 0.71 T 0.48 0.09 0.29 0000 --- --- --- --- 015672 00000 ------------ C 0.52 0.91 0.71 T 0.48 0.09 0.29 0000 --- --- --- --- 015687 00000 ------------ G 0.52 0.91 0.71 A 0.48 0.09 0.29 0000 --- --- --- --- 015983 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 016022 00000 ------------ C 0.92 0.76 0.84 A 0.08 0.24 0.16 0000 --- --- --- --- 016094 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016184 00000 ------------ G 0.89 0.76 0.82 A 0.11 0.24 0.18 0000 --- --- --- --- 016341 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 016364 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016556 00000 ------------ C 0.50 0.72 0.61 T 0.50 0.28 0.39 0000 --- --- --- --- 016608 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016714 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 016857 00366 SYNON T 0.46 0.72 0.59 C 0.54 0.28 0.41 0112 AGT AGC SER(S) SER(S) 016926 00435 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0135 GAC GAT ASP(D) ASP(D) 016932 00441 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0137 CCC CCT PRO(P) PRO(P) 017001 00510 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0160 TAG TAA *** *** 017068 00577 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017076 00585 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017139 00648 3' UTR C 0.48 0.72 0.60 G 0.52 0.28 0.40 0000 --- --- --- --- 017163 00672 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 017311 00820 3' UTR T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 017312 00821 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 017692 01201 3' UTR - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 017965 01474 3' UTR G 0.83 0.74 0.78 A 0.17 0.26 0.22 0000 --- --- --- --- 018184 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018240 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 018328 00000 ------------ T 0.85 0.74 0.79 C 0.15 0.26 0.21 0000 --- --- --- --- 018358 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 018383 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018395 00000 ------------ A 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 018423 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018694 00000 ------------ T 0.83 0.74 0.79 C 0.17 0.26 0.21 0000 --- --- --- --- 019077 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 019116 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019327 00000 ------------ G 0.75 0.54 0.65 A 0.25 0.46 0.35 0000 --- --- --- --- 019517 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001246: C 002620: G 004470: TATG 004511: T 008576: C 012437: AG 017692: T 018240: GCGCC