Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000170 G 1 0 1 A 47 46 93 000806 T 14 10 24 C 34 36 70 000884 A 4 5 9 G 38 35 73 000951 A 1 0 1 G 41 46 87 001263 A 8 1 9 G 36 45 81 001773 C 7 0 7 T 31 44 75 001995 C 1 2 3 T 43 42 85 002586 A 28 6 34 C 18 40 58 002592 A 2 17 19 C 46 29 75 003027 G 1 0 1 C 47 42 89 003094 + 1 22 23 - 47 20 67 003385 C 3 4 7 T 35 40 75 003519 T 3 0 3 G 37 46 83 003772 G 7 5 12 T 19 39 58 004021 - 7 1 8 + 33 45 78 004471 T 1 0 1 C 45 44 89 004510 T 1 0 1 C 45 46 91 004642 - 2 0 2 + 46 28 74 004745 A 13 4 17 C 35 42 77 005042 C 11 0 11 G 37 42 79 005167 G 12 20 32 A 22 24 46 005192 T 1 0 1 C 33 42 75 005195 C 1 0 1 T 33 46 79 005197 G 2 0 2 C 32 40 72 006126 G 1 20 21 A 39 22 61 007237 A 12 4 16 G 34 42 76 007611 + 5 0 5 - 25 44 69 007793 T 1 2 3 C 13 24 37 008418 T 11 3 14 G 35 29 64 008726 G 7 5 12 T 41 27 68 009296 G 6 0 6 A 34 20 54 009457 T 9 0 9 G 31 20 51 009508 A 1 8 9 G 39 12 51 009577 - 1 13 14 + 35 33 68 009958 T 12 1 13 A 34 39 73 010274 C 1 0 1 T 47 42 89 010366 G 5 5 10 A 43 37 80 010795 A 1 0 1 G 39 44 83 011084 C 10 4 14 T 30 42 72 011469 G 2 0 2 T 44 46 90 011498 A 0 1 1 G 46 45 91 011520 C 1 0 1 T 45 46 91 011731 T 3 0 3 G 43 46 89 011836 A 2 21 23 G 44 25 69 011908 T 0 1 1 C 46 45 91 012016 C 1 0 1 T 43 46 89 012041 A 1 0 1 G 43 44 87 012364 G 2 21 23 C 42 25 67 012436 C 1 0 1 A 43 46 89 012470 C 5 5 10 A 39 41 80 012473 C 2 21 23 T 42 25 67 012562 G 1 0 1 A 43 46 89 012674 T 2 2 4 G 40 44 84 012791 G 1 0 1 A 43 44 87 012933 A 2 20 22 G 42 24 66 013256 T 2 21 23 A 44 25 69 013500 C 2 21 23 T 44 25 69 014107 T 10 21 31 C 38 25 63 014285 A 1 21 22 T 47 25 72 014331 C 10 21 31 T 38 25 63 014352 T 1 0 1 C 47 46 93 014580 T 9 21 30 C 37 23 60 014660 C 9 21 30 T 35 23 58 014690 T 9 21 30 G 35 23 58 014698 A 9 21 30 C 35 23 58 014812 T 1 0 1 G 41 44 85 014835 A 5 1 6 G 37 43 80 015221 - 10 21 31 + 38 25 63 015253 C 13 13 26 T 35 33 68 015301 T 1 0 1 G 47 46 93 015712 T 2 7 9 G 32 27 59 016004 C 9 21 30 A 31 25 56 016206 T 11 4 15 C 29 42 71 016233 T 1 1 2 C 39 45 84 016391 G 9 21 30 A 31 25 56 016420 T 1 0 1 A 39 46 85 016512 T 9 21 30 A 31 25 56 016901 A 6 0 6 G 42 44 86 017007 A 1 0 1 G 47 44 91 017104 A 10 21 31 C 38 25 63 017295 T 2 0 2 C 46 46 92 017419 G 1 0 1 A 45 46 91 017568 T 7 0 7 C 39 44 83 017607 T 12 12 24 G 34 32 66 017742 A 1 0 1 T 35 44 79 017821 G 4 5 9 T 32 39 71 018135 T 2 2 4 C 30 40 70 021979 A 1 0 1 G 43 46 89 022044 A 8 21 29 C 36 25 61 022056 C 8 21 29 A 36 25 61 022089 T 1 0 1 C 45 46 91 022352 G 10 21 31 A 38 25 63 022455 G 10 21 31 A 38 25 63 022626 A 10 20 30 G 38 24 62 022647 A 10 19 29 G 38 23 61 022693 G 10 19 29 T 38 23 61 022707 A 10 18 28 G 38 24 62 022759 A 2 10 12 G 28 16 44 023642 C 9 21 30 T 37 25 62 023665 C 10 21 31 T 38 25 63 023715 T 5 1 6 C 43 45 88 023747 C 10 21 31 A 38 25 63 023755 T 10 21 31 C 38 25 63 024037 C 21 11 32 T 27 35 62 024579 G 9 21 30 T 37 25 62 024697 T 9 21 30 C 37 25 62 024908 C 1 0 1 T 31 18 49 026004 A 1 0 1 C 35 44 79 026054 T 7 18 25 G 27 24 51 026297 T 0 2 2 C 36 36 72 027326 C 10 17 27 G 34 23 57 027375 A 12 12 24 G 34 30 64 027571 A 10 19 29 C 22 21 43 027959 T 7 18 25 C 23 22 45 028365 T 1 11 12 C 39 15 54 028380 C 1 2 3 T 39 30 69 028703 C 0 1 1 T 40 39 79 029036 A 5 6 11 T 31 34 65 029139 G 1 0 1 T 35 38 73 030269 T 3 11 14 C 15 27 42 030636 T 1 0 1 C 41 42 83 030842 T 1 1 2 C 37 37 74 031604 T 1 0 1 G 47 46 93 031623 T 10 21 31 C 38 25 63 032114 T 10 21 31 C 38 25 63 032600 A 10 21 31 G 38 25 63 032614 A 2 0 2 G 46 46 92 032782 T 2 0 2 C 46 46 92 032939 C 1 0 1 A 47 46 93 033388 C 0 1 1 T 48 45 93 033468 G 0 3 3 A 48 43 91 033526 T 10 21 31 C 38 25 63 033758 T 0 1 1 C 48 45 93 033801 A 10 21 31 T 38 25 63 033844 C 5 1 6 G 43 45 88 034032 T 1 0 1 C 47 46 93 034264 C 13 4 17 T 35 42 77 034369 T 10 21 31 C 38 25 63 034467 G 9 0 9 A 39 46 85 034485 A 1 0 1 G 47 46 93 034548 G 1 0 1 T 47 46 93 035143 G 5 1 6 A 43 45 88 035223 T 13 4 17 A 35 42 77 035327 T 3 0 3 C 45 46 91 035491 T 3 0 3 C 45 46 91 035510 T 10 21 31 C 38 25 63 035758 - 9 20 29 + 35 24 59 035767 C 7 0 7 G 37 46 83 035937 A 3 0 3 C 43 46 89 035972 G 12 13 25 A 34 33 67 036084 C 9 21 30 A 37 25 62 036156 T 2 2 4 C 46 42 88 036249 T 10 21 31 C 38 25 63 036468 C 13 4 17 T 35 42 77 036752 T 3 0 3 C 45 46 91 036842 A 10 21 31 G 38 25 63 037749 A 2 0 2 G 46 46 92 037757 T 10 21 31 C 38 25 63 037777 C 1 21 22 T 47 25 72 037940 C 2 21 23 T 46 25 71 037985 C 0 1 1 T 48 45 93 038014 T 10 21 31 C 38 25 63 038015 A 13 4 17 G 35 42 77 038036 T 5 5 10 C 43 41 84 038258 A 1 0 1 G 47 46 93 038313 C 10 21 31 T 38 25 63 038363 T 0 1 1 C 48 45 93 038397 T 3 0 3 C 45 46 91 038414 A 13 4 17 G 35 42 77 038510 G 1 0 1 A 47 46 93 038613 T 10 21 31 C 38 25 63 038665 A 5 1 6 C 43 45 88 038877 G 3 5 8 T 45 41 86 038906 C 13 4 17 T 35 42 77 038916 A 25 21 46 G 23 25 48 038969 A 13 4 17 G 35 42 77 039065 T 25 21 46 C 23 25 48 039225 T 6 7 13 C 40 39 79 039402 G 23 23 46 T 25 21 46 039478 A 10 18 28 G 38 24 62 039504 G 1 0 1 A 47 44 91 039537 C 23 23 46 T 25 21 46 039552 G 23 22 45 A 25 20 45 039600 G 13 4 17 C 35 40 75 039648 G 0 1 1 T 48 43 91 039703 C 23 23 46 G 25 21 46 039804 A 1 0 1 C 47 44 91 039891 T 0 1 1 A 48 43 91 039905 G 1 0 1 A 47 44 91 040125 C 24 19 43 T 22 23 45 040204 T 24 19 43 C 22 23 45 040273 A 24 19 43 G 22 23 45 040421 G 3 0 3 C 43 42 85 040470 A 0 2 2 G 46 40 86 040487 C 2 0 2 A 44 42 86 040505 G 5 1 6 A 41 41 82 040507 A 24 19 43 C 22 23 45 040621 T 2 0 2 C 44 42 86 040650 G 1 0 1 A 45 42 87 040682 G 12 13 25 T 34 29 63 040809 C 1 0 1 T 45 42 87 040978 A 8 0 8 G 40 46 86 041025 C 13 3 16 T 35 41 76 041120 T 1 0 1 C 47 46 93 041152 T 3 0 3 C 45 44 89 041191 A 13 3 16 T 35 41 76 041223 G 13 3 16 A 35 41 76 041510 A 13 3 16 G 35 41 76 041526 A 2 2 4 C 46 42 88 041742 A 1 0 1 G 47 46 93 041803 - 3 0 3 + 43 46 89 041843 A 1 0 1 C 39 46 85 041907 G 2 0 2 C 44 44 88 042123 + 3 0 3 - 35 44 79 042209 G 1 0 1 C 41 44 85 042239 T 1 0 1 C 41 44 85 042242 A 1 0 1 C 41 44 85 042324 + 8 3 11 - 38 43 81 042397 A 2 2 4 G 46 44 90 042405 C 13 4 17 G 35 42 77 042584 C 24 12 36 T 22 34 56 042813 A 1 13 14 G 45 33 78 042957 A 0 1 1 G 46 45 91 042994 T 8 0 8 C 38 46 84 043076 T 2 2 4 C 44 44 88 043188 + 1 0 1 - 31 46 77 043208 T 0 1 1 C 42 45 87 043218 G 8 0 8 C 34 46 80 044455 A 1 0 1 G 47 46 93 044514 T 1 0 1 C 47 46 93 044617 T 4 1 5 C 44 45 89 044749 C 0 2 2 G 48 44 92 045273 G 13 4 17 A 35 38 73 045294 G 1 0 1 A 47 42 89 045299 A 1 0 1 T 1 0 1 C 46 42 88 045379 T 1 0 1 G 47 42 89 045443 G 3 0 3 A 45 42 87 045474 G 3 2 5 A 45 38 83 047258 A 1 0 1 C 47 46 93 047634 T 1 0 1 C 47 46 93 047648 C 23 7 30 T 25 39 64 047680 T 1 0 1 C 43 44 87 047861 T 3 0 3 C 45 46 91 047915 A 2 2 4 G 46 44 90 048647 T 3 1 4 C 43 41 84 048692 T 9 2 11 C 31 38 69 048829 A 1 1 2 G 43 41 84 048884 G 3 0 3 T 43 42 85 049006 A 21 6 27 G 23 36 59 049050 T 3 1 4 C 43 43 86 049852 T 1 1 2 C 43 45 88 050063 T 0 1 1 C 48 45 93 050275 C 23 7 30 T 25 39 64 050404 A 3 4 7 G 45 42 87 050428 A 2 2 4 G 46 44 90 050993 A 13 2 15 T 23 28 51 051178 G 3 0 3 A 41 34 75 051332 T 2 14 16 C 40 16 56 051369 C 17 21 38 T 23 15 38 051383 A 2 1 3 G 42 37 79 051433 T 14 2 16 G 28 34 62 051455 A 1 1 2 C 43 33 76 051547 T 1 17 18 C 37 21 58 051606 A 1 2 3 G 35 42 77 051732 G 0 4 4 T 30 34 64 051775 T 1 1 2 C 25 39 64 052121 - 1 0 1 + 33 38 71 052122 A 1 0 1 T 43 40 83 052144 G 1 0 1 A 39 38 77 052349 T 1 1 2 C 41 43 84 052350 A 13 3 16 G 27 39 66 052405 A 11 3 14 G 29 41 70 052525 T 11 2 13 C 29 34 63 052621 T 13 2 15 C 25 34 59 052622 A 8 0 8 G 34 40 74 052914 T 0 1 1 C 48 45 93 053235 T 0 1 1 C 46 37 83 053332 G 5 2 7 A 41 36 77 053449 T 1 20 21 C 39 22 61 053632 G 8 21 29 A 34 17 51 053808 A 18 4 22 G 26 36 62 053997 A 1 0 1 G 41 44 85 054132 C 1 0 1 T 47 46 93 054247 A 1 0 1 G 47 46 93 054398 T 1 2 3 G 47 44 91 056139 G 1 0 1 C 45 46 91 Note: ED : European Descent AD : African Descent pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 003094: CCA 004021: a 004642: t 007611: TATA 009577: c 015221: t 035758: agag 041803: agaa 042123: TTTGA 042324: G 043188: CTC 052121: a