Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000031 00000 ------------ T 0.63 0.75 0.69 G 0.37 0.25 0.31 0000 --- --- --- --- 000048 00000 ------------ C 0.96 0.97 0.97 T 0.04 0.03 0.03 0000 --- --- --- --- 000196 00000 ------------ A 0.91 0.61 0.76 G 0.09 0.39 0.24 0000 --- --- --- --- 000267 00000 ------------ T 0.91 0.78 0.85 G 0.09 0.22 0.15 0000 --- --- --- --- 000342 00000 ------------ A 0.96 0.96 0.96 C 0.04 0.04 0.04 0000 --- --- --- --- 000351 00000 ------------ A 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 000680 00000 ------------ C 0.62 0.76 0.69 T 0.38 0.24 0.31 0000 --- --- --- --- 000999 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001163 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001472 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 001632 00000 ------------ G 0.71 0.35 0.53 A 0.29 0.65 0.47 0000 --- --- --- --- 001817 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001848 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002176 00000 ------------ T 0.63 0.79 0.70 A 0.37 0.21 0.30 0000 --- --- --- --- 002187 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 002235 00000 ------------ C 0.65 0.76 0.70 T 0.35 0.24 0.30 0000 --- --- --- --- 002300 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002580 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002689 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002745 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002749 00000 ------------ A 0.83 0.78 0.81 G 0.17 0.22 0.19 0000 --- --- --- --- 002759 00000 ------------ G 0.62 0.89 0.76 C 0.38 0.11 0.24 0000 --- --- --- --- 003162 00000 ------------ C 0.88 0.96 0.92 T 0.12 0.04 0.08 0000 --- --- --- --- 003345 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003563 00000 ------------ G 0.92 0.78 0.85 C 0.08 0.22 0.15 0000 --- --- --- --- 003977 00000 ------------ T 0.65 0.38 0.51 C 0.35 0.62 0.49 0000 --- --- --- --- 004442 00000 ------------ C 0.96 0.61 0.79 T 0.04 0.39 0.21 0000 --- --- --- --- 004447 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004893 00000 ------------ C 0.96 0.82 0.89 T 0.04 0.18 0.11 0000 --- --- --- --- 004909 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004948 00000 ------------ G 0.42 0.71 0.56 A 0.58 0.29 0.44 0000 --- --- --- --- 005162 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005882 00000 ------------ G 0.88 0.57 0.72 A 0.12 0.43 0.28 0000 --- --- --- --- 005940 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006038 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006049 00000 ------------ A 0.83 0.78 0.81 G 0.17 0.22 0.19 0000 --- --- --- --- 006058 00000 ------------ C 0.92 0.78 0.85 T 0.08 0.22 0.15 0000 --- --- --- --- 006147 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 006220 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006272 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006345 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 006529 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006588 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006596 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 006991 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007413 00000 ------------ G 0.71 0.91 0.81 A 0.29 0.09 0.19 0000 --- --- --- --- 007625 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007750 00000 ------------ T 0.92 0.80 0.86 C 0.08 0.20 0.14 0000 --- --- --- --- 007821 00000 ------------ G 0.86 0.93 0.89 C 0.14 0.07 0.11 0000 --- --- --- --- 008350 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008351 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 008776 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009118 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009123 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009259 00000 ------------ G 0.92 0.73 0.83 C 0.08 0.27 0.17 0000 --- --- --- --- 009282 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 009356 00000 ------------ C 0.52 0.54 0.53 T 0.48 0.46 0.47 0000 --- --- --- --- 009612 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009714 00000 ------------ G 0.79 0.70 0.75 A 0.21 0.30 0.25 0000 --- --- --- --- 009757 00000 ------------ A 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 010087 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 010287 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010404 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 010515 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 010614 00000 ------------ T 0.71 0.50 0.61 A 0.29 0.50 0.39 0000 --- --- --- --- 010668 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010839 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 010915 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011217 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011257 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011266 00000 ------------ T 0.67 0.72 0.69 G 0.33 0.28 0.31 0000 --- --- --- --- 011378 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011548 00000 ------------ T 0.96 0.83 0.89 G 0.04 0.17 0.11 0000 --- --- --- --- 011614 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 011755 00000 ------------ A 0.95 0.96 0.95 G 0.05 0.04 0.05 0000 --- --- --- --- 011781 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011937 00000 ------------ G 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 012061 00000 ------------ T 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 012524 00433 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0117 GAG GAA GLU(E) GLU(E) 012544 00453 NON-SYN C 0.95 0.89 0.92 G 0.05 0.11 0.08 0124 GCA GGA ALA(A) GLY(G) 012751 00000 ------------ T 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 012806 00000 ------------ G 0.83 0.87 0.85 T 0.17 0.13 0.15 0000 --- --- --- --- 012974 00000 ------------ C 0.80 0.67 0.74 T 0.20 0.33 0.26 0000 --- --- --- --- 013061 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 013119 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013190 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 013328 00000 ------------ T 0.79 0.67 0.73 A 0.21 0.33 0.27 0000 --- --- --- --- 013947 00000 ------------ G 0.98 0.87 0.93 A 0.02 0.13 0.07 0000 --- --- --- --- 013989 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014122 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014250 00000 ------------ G 0.56 0.72 0.64 T 0.44 0.28 0.36 0000 --- --- --- --- 014334 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014992 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015728 00000 ------------ A 0.96 0.96 0.96 G 0.04 0.04 0.04 0000 --- --- --- --- 015755 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016037 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016053 00000 ------------ - 0.23 0.30 0.26 + 0.77 0.70 0.74 0000 --- --- --- --- 016150 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016266 00000 ------------ C 1.00 0.92 0.96 T 0.00 0.08 0.04 0000 --- --- --- --- 016694 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 016749 00000 ------------ A 0.79 0.73 0.76 C 0.21 0.27 0.24 0000 --- --- --- --- 016981 00000 ------------ A 0.88 0.89 0.88 G 0.12 0.11 0.12 0000 --- --- --- --- 017419 00000 ------------ G 0.91 0.97 0.94 A 0.09 0.03 0.06 0000 --- --- --- --- 017704 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017859 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017991 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018364 00000 ------------ C 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 019020 00000 ------------ G 0.71 0.73 0.72 T 0.29 0.27 0.28 0000 --- --- --- --- 019304 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 019655 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019669 00000 ------------ G 0.79 0.67 0.73 A 0.21 0.33 0.27 0000 --- --- --- --- 019734 00000 ------------ A 0.81 0.96 0.88 G 0.19 0.04 0.12 0000 --- --- --- --- 020278 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020593 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 020752 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020984 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021010 00000 ------------ A 0.96 0.96 0.96 G 0.04 0.04 0.04 0000 --- --- --- --- 021077 00000 ------------ G 0.93 0.97 0.95 C 0.07 0.03 0.05 0000 --- --- --- --- 021135 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021758 00000 ------------ A 0.93 0.91 0.92 C 0.07 0.09 0.08 0000 --- --- --- --- 021920 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 022164 00000 ------------ - 0.91 1.00 0.95 + 0.09 0.00 0.05 0000 --- --- --- --- 022276 00000 ------------ G 0.79 0.86 0.83 A 0.21 0.14 0.17 0000 --- --- --- --- 022449 00000 ------------ - 0.26 0.50 0.39 + 0.74 0.50 0.61 0000 --- --- --- --- 023657 00000 ------------ A 0.71 0.70 0.71 G 0.29 0.30 0.29 0000 --- --- --- --- 023738 01414 SYNON A 0.98 1.00 0.99 T 0.02 0.00 0.01 0444 GTA GTT VAL(V) VAL(V) 023772 01448 SYNON A 0.94 0.91 0.92 C 0.06 0.09 0.08 0456 AGA CGA ARG(R) ARG(R) 024118 01794 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024143 01819 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024338 02014 3' UTR G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 024430 02106 3' UTR C 0.98 0.76 0.88 G 0.02 0.24 0.12 0000 --- --- --- --- 024804 02480 3' UTR T 0.95 0.90 0.93 G 0.05 0.10 0.07 0000 --- --- --- --- 025175 02851 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025179 02855 3' UTR G 0.94 0.72 0.83 A 0.06 0.28 0.17 0000 --- --- --- --- 025223 02899 3' UTR C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 025276 02952 3' UTR C 0.94 0.98 0.96 G 0.06 0.02 0.04 0000 --- --- --- --- 025438 03114 3' UTR C 0.96 0.91 0.94 T 0.04 0.09 0.06 0000 --- --- --- --- 025500 03176 3' UTR A 0.85 0.96 0.90 G 0.15 0.04 0.10 0000 --- --- --- --- 026760 04436 3' UTR G 0.86 0.90 0.88 T 0.14 0.10 0.12 0000 --- --- --- --- 027322 00000 ------------ G 0.81 0.86 0.84 T 0.19 0.14 0.16 0000 --- --- --- --- 027323 00000 ------------ A 0.81 0.86 0.84 T 0.19 0.14 0.16 0000 --- --- --- --- 027395 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 027421 00000 ------------ T 0.79 0.80 0.79 A 0.21 0.20 0.21 0000 --- --- --- --- 027680 00000 ------------ T 0.94 0.97 0.95 A 0.06 0.03 0.05 0000 --- --- --- --- 027777 00000 ------------ G 0.97 0.97 0.97 T 0.03 0.03 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006147: A 008351: TTAC 016053: G 021920: T 022164: T 022449: TC