IL1F10 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
TTGGAGGGAA ACTATGATTC CATGTCTA
T
G
A
G
A
T
G
G
A
G
T
T
T
C
A
C
T
C
T
G
T
C
50 |
REPEAT
G
C
C
C
A
G
G
C
T
G
G
A
G
T
A
C
A
G
T
G
G
T
G
C
C
A
T
C
T
T
G
G
C
C
C
A
C
T
G
C
A
A
C
C
T
C
T
G
C
C
100
T
C
C
C
A
G
G
T
T
C
C
A
G
T
G
A
T
T
C
C
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
T
A
A
G
T
A
G
C
T
G
G
G
C
C
T
150
A
C
A
G
G
T
G
C
A
T
G
C
C
A
C
C
A
T
G
C
C
T
G
G
C
T
A
A
T
T
T
T
T
C
T
A
T
T
T
T
T
A
G
T
A
G
A
C
A
C
200
G
A
G
G
T
T
T
C
A
C
C
A
T
G
T
T
G
G
C
C
A
G
G
C
T
G
G
T
T
T
G
A
A
C
T
C
C
T
G
A
C
C
T
C
A
A
G
G
G
A
250 |
var(248):[T:0.23]
T
C
T
G
C
C
T
G
C
C
T
T
A
G
C
C
T
C
C
C
A
A
A
G
T
G
T
T
G
G
G
A
T
A
C
A
G
G
C
A
T
G
A
G
C
C
A
C
C
A
300
T
G
C
C
T
G
G
C
C
T AAAGTCCTTT CAATTCTAAG ATTTTTTTTT
T
G
C
C
C
A
A
G
G
A
350 |
NOT SCANNED
G
C
T
T
A
T
C
T
G
C
C
A
C
T
A
T
T
G
T
T
T
C
C
A
A
C
A
T
G
T
C
C
T
T
G
G
C
C
C
A
C
A
G
C
T
T
A
G
A
G
400
A
G
T
C
T
G
G
T
C
T
T
C
T
T
A
A
T
T
A
T
C
T
T
T
T
C
A
A
G
T
G
T
T
T
A
T
G
A
C
T
T
A
G
T
T
C
C
T
C
A
450
G
C
T
A
G
A
C
T
G
T
G
A
A
A
C
T
A
C
T
T
A
A
C
A
A
C
A
A
G
G
A
C
T
G
T
G
T
A
T
T
G
A
A
T
G
T
C
T
G
T
500
G
T
C
A
C
A
C
A
G
C
A
G
T
G
T
A
A
A
T
G
C
T
G
G
G
T
A
A
A
C
A
C
T
C
A
T
T
G
G
T
T
G
C
C
T
G
A
C
A
T
550
A
G
T
A
A
C
T
C
A
T
G
C
T
T
T
A
A
G
C
C
T
T
C
C
C
A
T
A
G
A
A
G
G
G
T
G
A
G
A
G
A
T
T
G
G
G
A
G
A
G
600
T
G
G
A
A
G
A
A
G
A
A
T
G
A
T
C
A
C
T
G
G
C
C
T
T
A
G
A
A
A
G
C
A
G
A
A
A
T
C
T
G
G
T
C
C
C
A
T
T
T
650
C
T
G
C
C
C
A
T
C
T
T
T
T
C
T
C
A
T
T
T
C
T
C
A
T
C
C
T
G
C
A
G
G
C
A
T
C
T
G
A
G
T
C
T
T
A
G
A
C
C
700
C
A
C
C
T
A
T
C
C
C
A
C
T
T
C
C
T
C
A
A
G
A
A
G
C
C
C
T
T
G
G
T
G
G
A
A
C
T
T
T
G
C
A
A
A
T
G
A
C
C
750
A
A
A
G
A
G
G
G
A
G
A
A
T
T
A
T
A
A
T
A
A
G
G
T
T
G
T
T
A
G
T
T
T
C
C
A
G
A
G
A
A
C
A
T
T
A
C
A
C
C
800
T
A
A
G
C
T
T
C
T
C
C
A
C
G
C
T
T
G
T
A
A
T
G
G
A
G
G
G
A
T
G
G
A
T
G
G
A
T
G
G
A
T
G
G
A
T
G
G
A
T
850
G
G
A
T
G
G
A
T
G
A
A
T
G
G
A
T
G
G
A
T
G
A
A
A
G
G
G
T
G
G
A
C
A
G
A
A
G
G
G
T
G
G
A
T
G
G
A
T
G
G
900
G
C
A
C
A
T
G
G
G
T
G
G
A
T
G
G
A
T
G
G
T
T
G
G
A
T
G
G
A
T
G
A
T
G
GATGGA TGGAAGAATG
950
GACAGATGGG TAGATAGATG GACAGATGGG TGGCCGGGTG GATGG
T
TGGA
1000 |
var(996):[A:0.38]
TGGATGGACT GAGTCAAGTA ATGTCAATTA GAGACCTGAG TGTTCTTTCC
1050
TCTGTGCTCT ACTCACACTA TCATATTTCC TAGCAGTCCA TGGCACATGA
1100
TGTCTGCTCA GTCTCAGGGT GAATCTGAGG TCAATATCTT TGCAGTTGGG
1150
TTTCCCTAGA TGTTCTGTCC CATCAAGCTG GTACCAACTA ATTAAACCCA
1200
CTGAAAAGCA GAGACTCCCT TCTCGTCTTT CCAAACAGAG
C
CACACTCAC
1250 |
var(1241):[T:0.19]
AGTGCTATCA GCCCCTTCTC TTATTCTGGC TG
T
CTGGCCA CAGCCTGGAT
1300 |
var(1283):[C:0.24]
TC
C
GGCATCA GAATTTGTTC TGTCCTTGGG CTTGCCAGAC ATACTTTCTC
1350 |
var(1303):[A:0.24]
TTGTATTCAC CACCTCTTCA AGCCTAGGAT GGAGCCCCAC GGGGCACCAA
1400
AGATGTCTGA CCCCAGCACT GTTTAT
C
T
G
G
C
T
G
C
A
A
A
C
C
C
A
C
T
A
A
T
A
A
C
A
1450 |
NOT SCANNED
T
A
G
T
C
A
A
C
G
A
C
A
G
T
C
A
G
T
A
C
A
G
A
G
C
A
G
G
G
G
C
C
C
C
A
T
A
C
C
T
T
A
T
T
T
C
T
G
C
C
1500
A
A
G
G
C
T
T
T
A
T
G
G
A
T
G
A
C
T
C
T
C
T
C
C
C
C
C
T
T
C
A
A
C
A
A
A
T
G
C
T
C
C
T
T
A
A
T
G
T
T
1550
C
C
C
A
C
C
A
T
C
T
T
A
T
T
A
T
T
C
A
T
G
C
T
G
T
A
C
C
A
A
A
G
A
C
A
T
T
G
T
G
A
A
A
T
G
C
C
C
A
G
1600
G
C
T
C
T
T
C
T
T
C
C
T
T
C
A
T
G
T
C
C
T
G
C
A
G
C
C
A
A
T
T
A
T
A
G
A
G
A
T
T
G
G
T
G
C
A
G
G
C
C
1650
T
G
A
C
C
C
A
C
C
T
G
T
A
C
C
A
G
A
C
G
G
T
A
T
A
A
A
C
A
C
A
G
C
G
C
A
A
T
G
C
C
C
T
G
G
A
G
A
A
A
1700
T
C
A
G
T
T
G
G
A
G
T
C
T
C
C
A
G
G
G
A
T
C
A
G
G
G
T
T
C
C
A
G
G
A
A
C
T
C
A
G
G
A
T
C
T
G
C
A
G
G
1750
T
C
A
G
T
G
A
T
G
G
A
C
A
G
G
C
A
A
T
A
T
T
C
T
C
T
C
T
C
T
C
T
T
T
T
C
T
T
T
C
T
T
T
T
C
T
A
C
T
C
1800
T
C
T
C
C
T
G
T
C
A
A
T
A
T
C
T
C
T
G
G
T
A
T
G
C
C
C
T
C
T
A
T
C
C
C
T
T
C
A
C
T
C
C
T
C
C
T
G
G
C
1850
A
A
G
C
T
G
T
C
T
A
G
G
T
A
A
C
A
A
G
G
T
A
G
T
C
C
C
C
T
C
A
T
A
T
G
A
C
A
T
G
A
T
G
G
G
A
C
A
T
C
1900
A
A
A
A
A
C
A
T
T
T
A
G
G
A
G
C
A
C
A
T
A
A
A
G
A
G
A
T
T
T
G
A
G
G
A
G
A
A
G
G
A
A
T
A
G
G
T
T
A
A
1950
G
C
C
A
A
A
T
C
A
A
G
A
T
T
T
C
T
G
A
A
C
T
A
C
T
T
A
G
A
A
C
A
A
C
T
G
A
C
T
T
T
A
G
A
A
A
G
T
A
A
2000
T
C
T
C
A
A
A
A
G
A
A
A
C
C
A
T
C
T
G
G
G
C
C
A
A
T
G
G
T
A
T
T
C
A
A
A
C
C
G
T
G
T
T
T
G
G
T
G
G
A
2050
A
G
C
T
T
A
A
G
A
G
A
T
T
T
T
T
T
G
T
T
T
T
C
G
T
T
T
T
T
T
TTTTTTTTGT GCTCCTTGGT
2100
AGCTCCTCAG TGTCTTCTTT G
T
AGGCAAGA GAAATACTAG CAGGGTTCCA
2150 |
var(2122):[C:0.39]
AAGTCTCCAT TGCTTCCTGT GTCAGCAAAG CAGCTGCCCT TTATCCTTTT
2200
TAC
A
A
T
C
A
T
T
A
G
A
A
T
T
C
T
G
C
A
T
A
A
A
A
T
T
T
T
A
T
T
G
T
G
A
A
A
C
T
T
A
A
A
A
C
A
G
T
2250 |
REPEAT
|
var(2228):[G:0.25]
|
var(2246):[G:0.01]
T
T
T
G
A
A
A
G
A
T
A
C
C
T
T
A
C
T
C
A
A
T
C
T
T
T
C
C
A
T
C
C
A
A
T
G
T
T
G
A
T
A
A
G
T
T
G
A
A
G
2300
G
C
C
C
A
G
G
G
A
T
A
A
A
A
G
G
T
G
G
C
A
A
A
A
T
A
A
A
T
T
G
G
T
A
G
C
A
G
A
G
C
T
A
G
G
T
C
T
A
G
2350 |
var(2337):[G:0.01]
G
A
C
T
C
A
G
C
C
T
T
T
C
T
A
T
T
C
A
A
A
G
T
C
T
G
C
T
C
T
G
T
G
T
G
T
T
TCT ATGTCCTGGC
2400 |
var(2379):[G:0.08]
CACAAGGACC AGGGTAGTTC AATTAGGGTG GTTGGAGAGA GCTTCAAGTG
2450
AGCTGTAAGC CATGCTTCAT GACTTCAAGA TCTTATAAAC TTTTATAAGG
2500
GAAACAAATA TCTTTATGTA CAACAATAAA TAATACAGTA AAATTTAATA
2550
GGAGTTCAGA GT
A
GAGTT
A
C AATAGTAAGG GAAAGATTCA TTAAACTCT
G
2600 |
var(2563):[G:0.09]
|
var(2569):[G:0.01]
|
REPEAT
A
G
T
C
A
T
G
G
A
A
T
T
A
T
A
A
A
T
A
G
T
T
T
G
G
C
C
T
A
G
G
A
A
G
A
A
C
C
T
T
C
A
T
A
A
C
C
A
C
A
2650 |
var(2631):[A:0.47]
T
A
A
T
C
T
A
A
T
C
C
C
A
T
G
A
A
T
G
T
A
T
A
G
T
G
C
T
G
A
A
A
C
T
G
A
G
G
G
T
T
G
G
A
G
G
T
T
A
A
2700 |
var(2660):[T:0.01]
A
A
G
A
C
A
T
A
A
C
C
C
T
G
T
A
T
G
T
C
T
A
A
G
C
T
G
T
A
A
C
T
C
T
A
C
A
C
T
G
G
T
A
A
T
T
A
A
T
T
2750
T
G
A
T
A
G
A
A
C
T
A
G
A
T
A
C
T
G
A
A
C
C
C
A
T
C
T
A
T
A
C
T
G
A
TACTAT CTCCAGTGAT
2800
CTTAATATCA AAAGATCTGA ATGGATGACA ATGAGAAGGG ATGACTTTTG
2850
AGGCAGGGAG AACAATGGGA CACCTGTGAG TACGTCCACT GAGAAGATAA
2900
GAAAGGAATT ATGT
T
GCCAG GAGGTGTGGT TTAGTGTCCA TGGAGAAGTG
2950 |
var(2915):[C:0.19]
AG
A
C
A
CTATC ACACAAGAAA ATCAGTGCCA GATGGTGGCA AAACAGTCAG
3000 |
var(2953):[C:0.01]
|
var(2954):[T:0.19]
|
var(2955):[G:0.19]
TCACTGTAGA TTCTAGAGCT GGGCAGGGAT GTGGTG
A
AAA AAATCTTTAG
3050 |
var(3037):[:0.89]
AACGTGGGTC CACATTCCTC ACATAGGTTG GAATGAATGA AA
G
GCAGAAA
3100 |
var(3093):[A:0.02]
AACCGGGAAT ACAAGTACAG TAGTAATGGC AATTAAAAAC ACAAAGT
T
A
T
3150 |
REPEAT
A
T
T
T
T
A
A
A
G
A
A
A
T
A
A
C
C
T
G
T
A
G
G
G
A
C
T
T
G
A
T
A
A
G
T
T
A
G
A
C
A
C
T
G
A
G
T
C
A
G
3200
G
A
G
A
A
G
T
A
G
G
A
G
A
T
A
T
T
G
T
C
A
A
T
G
A
G
T
C
T
C
A
G
G
T
T
T
T
G
A
A
T
A
T
C
A
C
T
G
G
T
3250 |
var(3215):[G:0.02]
G
A
G
A
G
G
A
A
T
A
T
T
A
T
G
A
C
A
G
T
G
A
G
A
G
A
A
A
T
G
A
A
A
T
T
G
G
G
A
G
G
A
A
T
G
T
G
T
G
G
3300 |
var(3278):[C:0.02]
|
var(3284):[C:0.02]
G
C
T
G
G
G
A
G
G
A
G
A
A
G
A
T
A
A
T
T
A
A
C
T
T
A
A
C
C
T
T
A
A
A
T
A
T
A
T
T
T
G
G
T
T
G
G
A
T
A
3350
T
C
A
G
C
A
G
G
A
T
G
T
C
C
A
A
A
G
T
G
G
G
C
T
G
T
C
C
T
G
T
A
G
G
C
T
G
C
A
G
G
A
G
G
T
A
A
A
G
T
3400
G
G
G
A
T
G
T
G
C
A
G
T
C
T
A
C
A
T
T
T
G
G
G
A
G
C
C
A
T
T
A
G
C
C
C
A
A
G
A
T
A
A
T
C
A
T
T
G
C
A
3450
G
C
T
G
T
A
G
A
A
G
T
C
A
A
T
G
A
ATT GCAGCTTAAT ATGATGTGAA ATAGAAGTGC
3500
TTAGGACCTT GTTAGCCTTA GGGGTGGCCC CAGAAGGAGG TGAAATCTAC
3550
A
A
TGGGAGAA AGAGGTGTGA AGGGAGTCAT TCAATGTCAA GGGTTCCAAG
3600 |
var(3552):[G:0.16]
GAGGCAATGA CTAAATATCA AAGGAATCAA AAGAATCTCT GGATCTTGCT
3650
CCACAGAA
G
T TAATATTGGT CTTGGACAGA A
C
ATC
C
CACA TAGATACTGT
3700 |
var(3659):[C:0.11]
|
var(3682):[T:0.01]
|
var(3686):[A:0.01]
GCAGGAGAAT GATGAAGGAT AGGACAGGGT GCTGTGCAAA AGAACATGGG
3750
GAAAGCCCAA GTTTAGCTGA TGGCAGTGTT TGAGCCAGGA CAGGTGAATT
3800
GCGGAGGTCT GAGAGCCAGA TGCCATGTCC AGGGAGAAAT GAGAGGAAGA
3850
AAAGAGGGAT ATAGACTGAA GTTCAGTGAA AAGTCATTTG AGGAAAATAG
3900
GGAGGGGAAG CTTTGGGGGT GAGGCATGTG GCACACTGGG AGGGGCTTGG
3950
CAC
A
CAGCAG AGGTTCAGCA CCAAGACCCA GGCTCTCTGA TGGACCAGA
C
4000 |
var(3954):[C:0.06]
|
var(4000):[T:0.01]
G
CTAGCTTCC TACC
C
TTACT CACTTCATCA CAATCTATCA GAACCCAGGC
4050 |
var(4001):[A:0.10]
|
var(4015):[T:0.14]
GGAGGGAGCC GAATAGGGGA GCCTTTGGGA AAGACACTGT ACATTTTGGC
4100
TGTGCCAGAA TGGGAGGTTT CTAGGGCCCA TGGGATCCAG CTGGACTGGA
4150
CCAGCATTGA ATTTCTTCCA GCTCTTTGAG CTGACACTGA CCCAGAGTGG
4200
GAGTCATCAG CTTGCTATCC ACCTTCACCC AGGGCCCTCC ACTTTGTTGC
4250
CCCA
C
CTAGA TCTGGGCACA GCTACCACAC TGCCCACTGT CCTGCTGCTA
4300 |
var(4255):[T:0.24]
CAACCAAAGA AGCCCCAGTG GTTTGGCCAA GGGGAGCCCA TCATCAAGTG
4350
GGCTTGCATT GAGGCCATGA TGCTGTTGAG TTATCTGTAC TGGGGGATTG
4400
TCTAGTCCTT TAGG
A
C
T
C
A
A
A
G
T
G
C
T
G
G
C
C
A
G
G
A
G
G
A
A
C
C
A
G
C
A
G
C
A
T
T
G
4450 |
REPEAT
A
C
A
T
C
A
C
C
T
G
G
T
T
G
C
A
T
A
T
T
T
G
A
A
A
T
G
T
A
C
A
G
T
C
T
C
A
G
G
C
C
C
C
A
C
C
C
C
A
G
4500
G
C
C
T
G
A
A
A
A
A
C
C
A
G
A
A
T
C
T
G
T
T
A
T
T
T
T
A
A
C
A
A
G
A
A
C
T
G
C
A
G
G
T
G
G
T
T
T
A
T
4550
A
T
A
T
T
T
A
T
T
A
A
T
A
A
G
T
G
T
G
A
AGAATGGAAT
G
AAAGTACA
C
CAGTTCCCAA
4600 |
var(4581):[A:0.12]
|
var(4590):[T:0.08]
GCAGC
A
TGGC TGATTGCTGG AAT
C
A
C
T
C
C
A
A
G
T
C
C
T
A
C
T
G
A
A
T
T
A
G
A
A
C
C
4650 |
var(4606):[C:0.48]
|
REPEAT
|
var(4649):[A:0.02]
T
T
C
G
G
C
C
C
A
G
G
A
A
A
T
A
G
T
A
A
T
T
A
T
A
C
A
G
A
G
T
C
C
C
C
C
A
G
G
T
G
A
T
G
C
A
G
A
T
G
4700
G
G
C
A
G
G
C
A
C
A
T
T
T
A
G
G
A
G
C
C
A
A
T
G
ACTTTA ACT
A
AACACT TCATTTAAAA
4750 |
var(4734):[G:0.34]
AATGTTG
A
AA CTTACTTGAT ACTACAAAGG AAATTCATGT TCATTATAGG
4800 |
var(4758):[T:0.01]
AAAATGTTGA TATGTTTAAA AAATTACTCA TAAAGCCATA GGTAAGTGGT
4850
GCAACAACAC GAGTAACAT
T
TC
T
A
T
G
T
A
T
G
T
G
T
C
T
C
T
A
T
G
T
G
T
G
G
A
T
T
T
A
4900 |
var(4870):[A:0.08]
|
REPEAT
|
var(4890):[A:0.18]
A
A
T
A
G
A
A
T
T
A
C
A
G
T
G
T
A
C
A
C
T
T
G
A
T
T
T
A
T
A
A
T
C
T
G
C
A
T
T
T
T
T
C
A
C
C
T
A
A
T
4950
A
T
A
T
T
T
T
G
A
A
A
A
T
T
T
T
T
A
T
G
T
C
C
T
A
A
A
A
C
A
A
G
C
T
T
C
T
A
T
A
A
T
A
T
C
A
T
C
T
T
5000
T
A
A
C
A
A
A
C
A
C
A
T
A
C
A
T
C
C
T
T
A
T
T
T
A
T
T
G
A
A
T
T
T
T
G
C
T
A
T
A
A
T
T
T
C
T
T
A
G
C
5050
C
A
A
T
T
A
C
C
T
A
T
T
A
C
T
G
A
A
A
A
T
T
C
A
G
A
T
T
T
T
T
T
T
C
A
A
C
T
T
C
T
T
G
C
T
A
T
T
G
T
5100
A
A
A
A
A
A
T
T
A
T
G
C
A
G
T
G
A
A
C
A
T
T
T
T
T
G
T
A
A
G
T
A
A
A
C
A
T
T
T
G
G
G
C
A
A
T
C
C
G
T
5150
T
A
T
T
T
T
T
C
C
T
A
A
G
A
G
T
A
AGG GAAACACATG CAATCACAAA GTATACAGAA
5200
TGCTTTAAGA CTTTCATTCA CAGCACCAAC ATCCCTCCAG AATTTGCACT
5250
TGTTAGTCCC TATTATCCTT CA
C
TCTAAGT CTCAAAGTCA TACC
C
C
A
A
G
G
5300 |
var(5273):[T:0.01]
|
REPEAT
C
C
T
G
G
G
G
A
C
A
G
A
A
A
A
T
G
A
C
T
T
G
T
C
C
A
A
A
G
T
G
A
C
A
G
T
G
A
C
A
G
A
C
C
C
A
G
T
A
C
5350
T
A
A
A
A
G
C
C
A
C CTTGGCTACA GCCCTGTTTC TGGAACTTGA G
T
GCTGAGGT
5400 |
var(5392):[A:0.14]
GGTTG
G
AAGC CGTATCCTCA GCACCCACCT GTTCCTT
C
TC ACCTGCCTCC
5450 |
var(5406):[A:0.03]
|
var(5438):[T:0.02]
CCAGGGTCCC TCAGCATCTC TCTATTCCTC CCTGAGCCCT ATTACTTTCT
5500
TCCACCTGCC TTCTTCCTTT CTCTTCTCTC ATTTTCTGCT TTCTTATATT
5550
TTTTCTTCTC TATTCCCTTC TTATTTGGTG AGAATCAGAT CTACTCGGTA
5600
AACCTCAGCC CTAGTCATAC TTGCGTTACT TTCCTGAGCT AATTTCCAAC
5650
TCCTGATTAG CTCTGGGTTT ATTTCCA
T
GC TAAATTCTGG ACTGGCCTTT
5700 |
var(5678):[C:0.13]
CCAATGGGTG TTCATTTTAG GGAAGAGCTC TAGGACAGGA TAACCCATCG
5750
GGAAGGAGCA GAGTCATGTG AGGCTGTGTG GCCTGGCATT TATACAGGGC
5800
CACTATCTTC ACTGTGCCAT TTTCCATCTG GAACAGAATG GGGGAGTTTG
5850
GATGGGCTGT TTTC
A
GCAGT CTTGGCCAAG CACTTCTAGT CACTAGGAAT
5900 |
var(5865):[G:0.30]
GATGTTTTCC AACTCTCTGG GGAGACCCCA CCAGCCTCAC TGCTGCTGGA
5950
G
ACCCCTTCT AGTTGTGCTC TCTTCTTTCA CTCTGGGCTC TAGTT
A
TCTA
6000 |
var(5951):[A:0.03]
|
var(5996):[G:0.14]
ACCCTTGGCT AGTTATGGGG GCGG
G
GGTGT GGTGCCCTGT TGGCCAACAG
6050 |
var(6025):[T:0.24]
G
G
C
A
G
T
G
G
G
A
C
T
G
G
G
T
T
T
G
A
G
C
T
G
G
G
C
T
T
A
T
C
C
T
C
C
A
A
C
T
G
T
G
A
G
G
G
A
G
G
6100 | Exon 1 |
UTR
|
var(6074):[T:0.07]
C
T
A
C
A
G
C
A
C
A
C
T
C
C
A
C
C
C
C
A
C
T
C
T
C
A
G
G
G
C
T
G
G
G
A
A
T
T
G
T
T
G
T
G
G
C
T
C
A
G
6150 |
var(6137):[C:0.01]
C
T
A
T
T
T
G
G
G
G
G
A
A
T
C
T
G
T
T
T
T
C
C
A
G
T
T
T
C
T
C
A
G
A
A
C
C
A
G
C
G
C
A
A
G
C
A
C
A
C
6200
A
C
A
T
C
C
C
A
G
G
C
T
C
A
C
A
C
C
C
C
T
G
G
T
G
G
C
T
G
G
A
C
T
T
G
C
T
C
C
C
G
G
A
T
A
G
C
C
T
C
6250 |
var(6213):[T:0.14]
A
G
T
C
A
G
G
G
A
G
A
G
G
C
A
G
A
G
C
T
G
C
C
T
G
G
A
G
C
C
T
G
C
T
G
G
G
C
T
G
G
T
G
G
A
A
G
C
C
T
6300
T
G
G
T
G
G
A
T
T
C
T
G
G
C
A
G
G
C
C
A
A
T
T
A
T
A
G
A
C
G
A
A
T
G
G
C
C
T
G
G
G
G
A
A
C
C
C
G
T
G
6350 |
var(6329):[T:0.24]
C
A
G
C
C
C
G
T
G
G
C
T
G
A
G
T
G
G
T
T
C
T
A
A
G
C
C
C
C
A
G
C
A
C
G
T
C
T
G
C
C
T
C
T
G
G
C
T
T
C
6400 |
var(6357):[T:0.34]
|
var(6368):[T:0.04]
A
C
C
C
A
G
C
C
T
C
C
T
T
T
T
C
T
A
A
C
T
G
C
C
C
T
T
C
T
C
T
C
C
T
C
C
C
C
A
T
C
A
G
T
G
A
G
G
A
C
6450
C
A
G
A
C
A
C
C
A
C
T
G
A
T
T
G
C
A
G
G
A
A
T
G
T
G
T
T
C
C
C
T
C
C
C
C
A
T
G
G
C
A
A
G
A
T
A
C
T
A
6500
M C S L P M A R Y Y 10
C
A
T
GTAAGTT GTCCTGGCAT GTCCCTGCTT TCCAAGCCAG GGGG
T
C
A
G
G
G
6550 |
NOT SCANNED
I 11
T
G
G
G
A
A
G
A
G
G
A
A
A
G
G
A
A
T
G
C
T
G
A
G
T
C
A
G
A
G
G
A
T
G
A
G
G
C
T
C
C
T
T
C
T
C
A
C
C
T
6600
T
A
G
A
A
A
T
T
G
C
A
A
G
T
G
C
C
C
C
A
T
A
A
T
T
A
A
G
C
T
T
C
A
T
C
A
T
C
A
C
C
A
C
A
G
T
A
G
C
A
6650
A
C
A
G
C
T
C
T
T
T
C
C
T
G
A
A
C
G
T
C
T
G
C
A
A
G
A
T
G
C
C
A
G
C
C
A
A
T
C
T
A
C
T
G
C
C
T
C
A
T
6700
C
T
C
T
G
T
T
C
C
A
A
A
A
A
G
T
C
T
G
T
A
A
G
T
G
G
A
G
T
G
T
T
A
T
T
A
A
A
C
C
C
A
T
T
T
T
A
C
A
G
6750 |
REPEAT
A
T
C
T
G
G
A
A
G
C
T
G
A
G
G
C
T
C
A
A
A
G
A
G
G
G
T
A
A
A
T
A
A
C
T
T
C
C
C
C
C
A
T
G
T
C
A
C
A
C
6800
A
G
C
T
A
C
C
A
A
A
A
G
G
C
A
G
A
G
C
C
A
G
G
A
A
T
C
A
G
A
C
T
T
C
A
T
G
T
C
C
T
C
T
G
T
G
C
T
G
C
6850 |
var(6844):[A:0.45]
T
C
C
A
T
C
C
G
C
C
T
C
T
CTGAAAT GTCAGAAAGT TTTGAATCTC AATGACAGCA
6900
TCTTGATGGT GGTCCCTGTG GCCTTTACTC CCAGTGTGGG CTTCTAACAC
6950
TTACTTACAT TTCATCTCAT TTGAGATTTG CATCCTTCCT TATCTTTTAC
7000
TACTTTGTTG TCTGTGATTT TGTCATAAGC TCCTTTCAGG AAGGAGGTGA
7050
GGCATAAGAA AAATCAAAGA GGACTCTGGG A
T
GCATTTCC TCTGC
C
CCTC
7100 |
var(7082):[C:0.36]
|
var(7096):[T:0.35]
CCATGGACCC TGTA
A
TGTCC AGGGCTGTGT CCTGGACAAG GTGGGTGGGG
7150 |
var(7115):[T:0.03]
AGCAGTCCTG GTCTCAAGGA GGTGACAGCC TGGCTGGGAA GCAAGACACA
7200
TACATAGGAA GCACATAAAT GACAAAGCAG ATGTCAGCAC TTCAGGGCAT
7250
CTAATCTGGG TTCTGGTCTC CAAATAGAAT GCTGCTGGCA TGTGAGTTGT
7300
CACATCTGGG T
T
G
T
C
A
A
G
G
T
G
G
C
A
A
G
G
G
G
A
A
T
G
C
C
A
G
A
T
A
A
C
A
C
G
C
C
C
A
G
7350 |
NOT SCANNED
G
A
T
C
T
T
T
C
C
G
G
A
A
G
T
T
T
A
T
T
T
T
T
A
T
T
G
T
A
C
A
A
G
T
G
A
A
C
C
T
G
C
T
T
T
A
A
A
T
A
7400
T
G
T
A
C
A
G
T
C
A
T
T
A
G
C
T
A
A
G
G
G
T
A
T
T
A
T
C
G
T
T
A
G
C
T
G
T
T
A
T
T
G
A
G
A
T
A
G
A
A
7450
A
A
A
T
C
C
C
C
T
G
G
A
G
G
T
G
G
T
G
G
A
A
T
T
T
G
T
C
C
A
G
A
G
G
T
T
C
T
G
C
C
C
T
A
A
A
A
G
G
T
7500
T
A
A
T
G
A
G
A
G
C
T
C
T
C
C
A
G
C
C
C
T
G
A
C
A
G
C
A
G
C
T
G
A
C
A
G
G
C
A
T
C
T
T
T
G
A
A
A
C
C
7550
A
A
C
T
A
G
G
T
G
A
C
T
G
A
G
C
T
A
A
T
A
C
C
C
T
G
C
A
T
G
A
C
T
T
T
G
A
A
G
C
C
T
T
T
A
A
A
A
T
A
7600
T
C
T
G
A
A
A
A
G
C
A
A
A
T
C
A
C
A
C
T
T
C
A
G
T
A
T
A
C
A
C
T
C
A
A
T
C
T
C
T
G
T
A
C
T
A
A
A
G
A
7650
G
A
A
T
A
A
A
C
A
T
T
T
A
TAAACAA TTAGGGCAGG CCCAAAAAAT TTAAGATAAG
7700
GTCCACTGTA TCCCAAAGTC ATCTGAGCCT CACTAAGAAA TTT
C
TCAGGA
7750 |
var(7744):[A:0.09]
AGCCAGGAAC ATTTTCTTTA CCCCTCTGTC
A
GAGGGCATT GGCTCTCC
G
T
7800 |
var(7781):[G:0.06]
|
var(7799):[A:0.01]
TCTCCTCTGA AGGCCTCCCC AAGCCATGAG AAGGCAGGAA GCACAGCCTC
7850
TGAAAAGCAA GAACACAGGA GACCTTCCTT GCTTTAAGGC TGGCCTGGTC
7900
TTTACCTGCT CTTGGGAGTG ACCATTCCCC TCTTACCACC TGTGAAGGAG
7950
AGAAAATCGC CCAAATGCTC AAGGTGGTGA TTCAGAGCAT GGAAGTGGAA
8000
GGGCTTGGGG GCCAGTGGTG CATAAAGGGA ATGGGCCATC AGCACTGTCA
8050
TACTGTTTCA G
A
A
T
T
A
A
A
T
A
T
G
C
A
G
A
C
C
A
G
A
A
G
G
C
T
C
T
A
T
A
C
A
C
A
A
G
A
G
A
8100 | Exon 2
I K Y A D Q K A L Y T R D 24
T
G
G
C
C
A
G
C
T
G
C
T
G
G
T
G
G
G
A
G
A
T
C
C
T
G
T
T
G
C
A
G
A
C
A
A
C
T
G
C
T
G
T
G
C
A
G
GTG
8150
G Q L L V G D P V A D N C C A 39
AGCTTCTGGG GCCTCCACCC CATGCTCCAT CTGCCATAGG CCCTCCCTTC
8200
TCTTCTTCCC TTTCCTCCCC AGCAGAG
G
GT CAGCAGCTGC CCCCAGTGAC
8250 |
var(8228):[T:0.07]
AGTGAGAAGG GCCAGAGAGC AGCTGTGGC
C
TCTCCTAG
C
G AGGGGACATG
8300 |
var(8280):[A:0.02]
|
var(8289):[T:0.04]
ACTCC
T
GCAG AAGTCCTGGC TCACCGTCCA GTCTGCATGC AGGGCCAGGC
8350 |
var(8306):[C:0.04]
CAGGTGTGCC CATGTCCAGT TCCTTCCTGC CTGAGCCTTT ACCTGCCAAG
8400
AGCCTGCAAC ATGGGGTTCC CTTGTCCCTT GACTCTTCTC TCTCTTCCCT
8450
CCTAG
A
G
A
A
G
A
T
C
T
G
C
A
C
A
C
T
T
C
C
T
A
A
C
A
G
A
G
G
C
T
T
G
G
A
C
C
G
C
A
C
C
A
A
G
G
8500 | Exon 3 |
var(8468):[T:0.43]
|
var(8489):[C:0.30]
E K I C T L P N R G L D R T K 54
T
C
C
C
C
A
T
T
T
T
C
C
T
G
G
G
G
A
T
C
C
A
G
G
G
A
G
G
G
A
G
C
C
G
C
T
G
C
C
T
G
G
C
A
T
G
T
G
T
G
8550
V P I F L G I Q G G S R C L A C V 71
G
A
G
A
C
A
G
A
A
G
A
G
G
G
G
C
C
T
T
C
C
C
T
A
C
A
G
C
T
G
G
A
G
GTGAGAG GCCTCTCCCC
8600
E T E E G P S L Q L E 82
ATTCTAGGGG ACACTGCAGA CCTGGCCTGA CCCCTG
G
GAT GCTCTGGCAT
8650 |
var(8637):[T:0.02]
CTTTGTGCCT ATCTGTGGAT TCCCAGCCAG GTC
C
ACATGT CCTACTTCCT
8700 |
var(8684):[T:0.03]
CAGGTTTCCA CCATCTCCCT CTGCACCTAG CACCAAGACC CTTGCCCTCT
8750
AGAATCTGCA GAAGGCAGTC CCTTGGGTAA AAACCAGCCC TGTCAGGTCC
8800
TTTTTTGGCC AAGCCCCAGA GGCCTCCAGG GCTAACACCT CCATCAGCAC
8850
TCTCATTCTG CAGCCATCCA CCTTGCCCCC ACAG
G
A
T
G
T
G
A
A
C
A
T
T
G
A
G
G
8900 | Exon 4
D V N I E 87
A
A
C
T
G
T
A
C
A
A
A
G
G
T
G
G
T
G
A
A
G
A
G
G
C
C
A
C
A
C
G
C
T
T
C
A
C
C
T
T
C
T
T
C
C
A
G
A
G
C
8950
E L Y K G G E E A T R F T F F Q S 104
A
G
C
T
C
A
G
G
C
T
C
C
G
C
C
T
T
C
A
G
G
C
T
T
G
A
G
G
C
T
G
C
T
G
C
C
T
G
G
C
C
T
G
G
C
T
G
G
T
T
9000
S S G S A F R L E A A A W P G W F 121
C
C
T
G
T
G
T
G
G
C
C
C
G
G
C
A
G
A
G
C
C
C
C
A
G
C
A
G
C
C
A
G
T
A
C
A
G
C
T
C
A
C
C
A
A
G
G
A
G
A
9050
L C G P A E P Q Q P V Q L T K E 137
G
T
G
A
G
C
C
C
T
C
A
G
C
C
C
G
T
A
C
C
A
A
G
T
T
T
T
A
C
T
T
T
G
A
A
C
A
G
A
G
C
T
G
G
T
A
G
G
G
A
9100 |
UTR
S E P S A R T K F Y F E Q S W 152
G
A
C
A
G
G
A
A
A
C
T
G
C
G
T
T
T
T
A
G
C
C
T
T
G
T
G
C
C
C
C
C
A
A
A
C
C
A
A
G
C
T
C
A
T
C
C
T
G
C
9150 |
var(9137):[T:0.18]
T
C
A
G
G
G
T
C
T
A
T
G
G
T
A
G
G
C
A
G
A
A
T
A
A
T
G
T
C
C
C
C
C
G
A
A
A
T
A
T
G
T
C
C
A
C
A
T
C
C
9200 |
REPEAT
|
var(9184):[A:0.03]
T
A
A
T
C
C
C
A
A
G
A
T
C
T
G
T
G
C
A
T
A
T
G
T
T
A
C
C
A
T
A
C
A
T
G
T
C
C
A
A
A
G
A
G
G
T
T
T
T
G
9250
C
A
A
A
T
G
T
G
A
T
T
A
T
G
T
T
A
A
G
G
A
T
C
T
T
G
A
A
A
T
G
A
G
G
A
G
A
C
A
A
T
C
C
T
G
G
G
T
T
A
9300 |
var(9278):[G:0.03]
T
C
C
T
T
G
T
G
G
G
C
T
C
A
G
T
T
T
A
A
T
C
A
C
A
A
G
A
A
G
G
A
G
G
C
A
G
G
A
A
G
G
G
A
G
A
G
T
C
A
9350
G
A
G
A
G
A
G
A
A
T
G
G
A
A
G
A
T
A
C
C
A
T
G
C
T
T
C
T
A
A
T
T
T
T
G
A
A
G
A
T
G
G
A
G
T
G
A
G
G
G
9400 |
var(9396):[C:0.03]
G
C
C
T
T
G
A
G
C
C
A
A
C
A
A
A
T
G
C
A
G
G
T
G
T
T
T
T
T
A
G
A
A
G
G
T
G
G
A
A
A
A
G
C
C
A
A
G
G
G
9450 |
var(9423):[G:0.03]
A
A
C
G
G
A
T
T
C
T
C
C
T
C
T
A
G
A
G
T
C
T
C
C
G
G
A
A
G
G
A
A
C
A
C
A
G
C
T
C
T
T
G
A
C
A
C
A
T
G
9500 |
var(9475):[A:0.03]
|
var(9498):[G:0.03]
G
A
T
T
T
C
A
G
C
T
C
A
G
T
G
A
C
A
C
C
C
A
T
T
T
C
A
G
A
C
T
T
C
T
G
A
C
C
T
C
C
A
C
A
A
C
T
A
T
A
9550 |
var(9503):[C:0.03]
A
A
A
T
A
A
T
A
A
A
C
T
T
G
T
G
T
T
A
T
T
G
T
A
A
A
C
C
T
C
T
A
A
G
T
T
T
G
T
G
G
T
A
A
C
T
T
G
C
T
9600
A
T
A
G
C
A
G
C
C
A
T
A
G
A
A
A
A
C
T
A
C
T
A
C
A
GAGCC TTATTCGACC CTGTGTCCAG
9650 |
var(9611):[C:0.04]
TGTTTGATGC AAGAGACTTG GTGAGTTCTT AGAAGGCTAC CTGCAGCTTC
9700
TCCTCCAGTC CATC
T
G
C
T
A
T
G
G
A
G
C
C
T
C
T
A
G
A
A
A
C
A
A
C
C
A
A
G
A
A
G
C
C
C
C
A
9750 |
NOT SCANNED
G
G
C
A
G
A
A
C
T
C
A
G
T
G
T
C
C
T
C
T
G
C
A
C
A
G
G
G
A
C
A
A
A
G
C
C
C
T
G
G
G
C
T
G
C
T
T
A
C
A
9800
A
C
T
T
A
A
A
T
T
C
T
A
G
C
T
C
A
A
G
T
C
T
T
G
T
G
A
T
T
T
T
C
T
A
C
C
A
G
A
T
A
C
T
T
C
A
C
A
G
T
9850
G
A
A
T
C
C
A
C
A
A
T
T
C
C
G
T
G
G
T
T
G
A
C
T
G
T
T
G
G
T
A
C
A
G
T
C
C
G
C
T
A
T
C
T
G
C
C
A
G
G
9900
T
G
C
T
T
A
A
G
T
A
G
T
A
G
C
A
A
G
G
G
C
C
A
G
A
C
A
A
T
A
T
G
T
G
T
G
T
C
C
T
G
G
A
T
G
T
G
T
T
G
9950
A
G
T
T
T
A
A
G
G
T
T
A
C
A
G
T
G
G
A
G
T
C
T
C
T
A
A
G
T
T
G
A
G
G
T
G
A
T
T
T
G
A
TA
T
AGCTG
10000 |
var(9995):[C:0.11]
GGAGTACAGG GCTGGAATTC AGCTGAGAGT TTGCAATTGG AATTCATACT
10050
CATCCTCAGA GCTCAAACGC TTCTCTGTTT CATGGAAAAT ATTTGACTGG
10100
GATCAAGCTA GAGCAGAAAG CCCATGGTAT CAGGACTCAG AGAAGGCACA
10150
GGCTGCTGGC GCTGTCCCTC TGTTGT
A
T
A
A
C
T
A
C
T
T
A
A
C
A
T
T
C
A
C
C
T
A
G
C
10200 |
REPEAT
|
var(10186):[C:0.14]
G
T
G
T
T
C
T
G
A
G
T
T
C
C
A
A
C
C
A
T
G
G
G
G
C
A
G
C
A
A
T
T
T
T
A
A
G
A
A
C
A
T
T
C
T
G
T
T
G
T
10250
C
A
T
C
C
T
C
A
G
A
A
T
G
A
C
T
C
T
T
C
A
A
G
G
C
A
A
G
C
A
T
T
T
T
C
A
C
C
T
C
C
A
T
T
T
G
A
C
A
G
10300
A
T
G
A
G
G
A
A
A
C
T
G
G
A
C
T
A
A
G
A
G
A
A
G
T
G
A
A
A
T
A
A
C
T
T
G
C
T
G
A
A
G
G
T
C
A
T
A
T
G
10350 |
var(10326):[A:0.01]
G
G
C
T
A
T
C
A
G
T
G
T
T
G
G
A
G
C
T
C
A
A
G
A
T
A
A
A
A
C
T
T
G
G
T
G
C
A
G
C
T
G
A
C
C
T
C
A
AT
10400
GCCATTTTGC AAATTTTTAT TCCACTTA
A
G
G
A
G
C
T
G
A
G
G
A
T
A
G
A
A
T
G
G
T
G
10450 |
REPEAT
A
A
T
A
A
A
A
C
C
A
A
A
C
T
T
C
C
T
T
G
T
A
G
C
T
G
A
T
A
A
T
T
G
A
A
A
G
G
G
A
G
A
A
A
C
A
C
T
A
A
10500
A
C
A
A
G
C
A
A
A
T
A
A
A
C
A
A
A
C
A
A
G
A
A
A
A
C
A
G
A
A
A
G
G
G
C
A
C
T
T
T
T
C
A
T
G
A
T
T
A
G
10550
A
A
G
G
T
G
A
G
G
G
C
A
G
C
A
G
G
T
A
T
T
C
A
A
T
G
G
A
A
A
T
A
T
T
A
G
A
T
G
C
G
G
G
G
G
T
C
A
G
G
10600 |
var(10590):[G:0.43]
G
G
A
G
G
T
T
T
T
T
T
T
TTGTTGTT GTTGTTGTTG TT
T
T
T
T
T
A
C
T
T
T
T
T
T
G
A
A
G
A
10650 |
REPEAT
G
G
T
A
A
C
A
T
C
T
G
C
A
C
T
G
A
G
G
T
T
A
T
G
G
A
C
A
G
G
A
A
G
G
A
A
C
T
G
T
G
A
C
T
A
G
A
A
A
T
10700 |
var(10687):[A:0.01]
A
A
T
C
A
A
G
G
C
A
A
A
A
G
A
G
T
A
G
C
A
A
A
T
G
T
G
T
T
G
G
C
C
C
T
G
A
G
A
C
A
G
A
A
A
G
G
A
G
C
10750
T
G
G
T
A
T
G
T
T
C
A
A
G
T
A
A
C
A
G
T
A
G
A
A
G
G
C
T
G
G
G
G
T
G
G
G
G
G
C
T
G
G
A
G
C
C
T
G
G
A
10800
G
A
G
C
A
A
G
G
G
A
G
G
A
G
T
A
G
G
C
A
G
T
G
A
G
C
A
A
G
A
C
C
A
G
C
A
G
G
G
T
T
G
G
G
T
C
A
T
G
T
10850
G
T
G
G
C
C
T
T
G
A
A
G
G
C
A
A
A
G
T
A
C
A
G
G
C
T
T
C
C
A
A
G
T
A
T
T
A
A
G
T
G
T
G
A
C
G
G
G
A
G
10900 |
var(10895):[T:0.13]
C
T
A
C
A
C
G
A
T
A
G
G
C
T
C
T
G
A
TA ATGTTTAGGT TCTTTCTCTG AGCTGCCTCT
10950
CCACAGCCTG TATGTGCCCC GGGAA
C
TTGA TCACCTGGCT
A
GCCCATTAT
11000 |
var(10976):[A:0.43]
|
var(10991):[G:0.43]
AACTATGTGT TTACATGGTG GGACTCAATT TTATGTCAGC
C
GTGGCCAGA
11050 |
var(11041):[T:0.43]
ACAGCTGCTG GTAAATGCAG AAGAGGCTGA GTAAATGCAA AATCTTAAAC
11100
AAGTTAATGG ATAATCACAC TTGATTCCT