Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000248 GG 11 18 29 GT 9 4 13 TT 4 0 4 0.780 0.220 1.801 000996 AA 0 3 3 AT 15 12 27 TT 9 4 13 4.959 1.351 4.615 001241 CC 24 7 31 CT 0 11 11 TT 0 3 3 0.000 0.159 1.841 001283 CC 4 0 4 CT 9 4 13 TT 11 16 27 0.780 0.247 1.537 001303 AA 4 0 4 AC 9 4 13 CC 11 16 27 0.780 0.247 1.537 002122 CC 2 4 6 CT 12 12 24 TT 9 7 16 0.517 0.087 0.417 002228 GG 4 0 4 GT 10 5 15 TT 9 18 27 0.175 0.342 0.783 002246 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 002337 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 002379 CC 19 20 39 CG 4 3 7 GG 0 0 0 0.209 0.112 0.312 002563 AA 13 18 31 AG 5 0 5 GG 0 1 1 0.468 19.000 1.649 002569 AA 17 19 36 AG 1 0 1 GG 0 0 0 0.015 0.000 0.007 002631 AA 4 2 6 AG 11 12 23 GG 3 5 8 0.919 1.659 2.255 002660 CC 17 19 36 CT 1 0 1 TT 0 0 0 0.015 0.000 0.007 002915 CC 0 2 2 CT 1 9 10 TT 17 8 25 0.015 0.052 0.524 002953 AA 17 19 36 AC 1 0 1 CC 0 0 0 0.015 0.000 0.007 002954 CC 17 8 25 CT 1 9 10 TT 0 2 2 0.015 0.052 0.524 002955 AA 17 8 25 AG 1 9 10 GG 0 2 2 0.015 0.052 0.524 003037 -- 17 8 25 +- 0 7 7 ++ 0 0 0 0.000 1.389 0.483 003093 AA 0 0 0 AG 1 0 1 GG 16 15 31 0.016 0.000 0.008 003215 AA 16 15 31 AG 1 0 1 GG 0 0 0 0.016 0.000 0.008 003278 AA 16 15 31 AC 1 0 1 CC 0 0 0 0.016 0.000 0.008 003284 CC 0 0 0 CT 1 0 1 TT 16 15 31 0.016 0.000 0.008 003552 AA 20 9 29 AG 0 9 9 GG 0 2 2 0.000 0.013 1.202 003659 CC 0 0 0 CG 5 5 10 GG 17 17 34 0.362 0.362 0.723 003682 CC 21 22 43 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 003686 AA 0 0 0 AC 1 0 1 CC 21 22 43 0.012 0.000 0.006 003954 AA 17 22 39 AC 5 0 5 CC 0 0 0 0.362 0.000 0.160 004000 CC 21 22 43 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 004001 AA 0 0 0 AG 5 4 9 GG 17 18 35 0.362 0.220 0.571 004015 CC 10 22 32 CT 10 0 10 TT 1 0 1 0.583 0.000 0.043 004255 CC 21 6 27 CT 0 13 13 TT 1 3 4 22.000 0.917 1.537 004581 AA 1 0 1 AG 4 5 9 GG 18 18 36 1.252 0.342 0.230 004590 CC 19 20 39 CT 4 3 7 TT 0 0 0 0.209 0.112 0.312 004606 AA 8 3 11 AC 11 15 26 CC 4 5 9 0.004 2.272 0.809 004649 AA 0 0 0 AC 2 0 2 CC 21 23 44 0.048 0.000 0.023 004734 AA 16 5 21 AG 4 15 19 GG 3 3 6 5.497 2.272 0.263 004758 AA 22 23 45 AT 1 0 1 TT 0 0 0 0.011 0.000 0.006 004870 AA 0 0 0 AT 4 3 7 TT 19 20 39 0.209 0.112 0.312 004890 AA 3 0 3 AG 11 0 11 GG 9 23 32 0.016 0.000 1.957 005273 CC 23 20 43 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 005392 AA 0 2 2 AT 0 9 9 TT 24 10 34 0.000 0.000 1.638 005406 AA 0 0 0 AG 0 3 3 GG 24 18 42 0.000 0.124 0.054 005438 CC 24 19 43 CT 0 2 2 TT 0 0 0 0.000 0.053 0.023 005678 CC 1 0 1 CT 5 5 10 TT 18 16 34 0.644 0.383 0.067 005865 AA 16 7 23 AG 5 6 11 GG 1 6 7 0.499 2.554 5.523 005951 AA 0 0 0 AG 3 0 3 GG 21 20 41 0.107 0.000 0.055 005996 AA 14 18 32 AG 10 2 12 GG 0 0 0 1.662 0.055 1.097 006025 GG 20 6 26 GT 3 12 15 TT 0 3 3 0.112 0.583 0.168 006074 GG 18 22 40 GT 6 0 6 TT 0 0 0 0.490 0.000 0.224 006137 CC 0 0 0 CT 1 0 1 TT 23 22 45 0.011 0.000 0.006 006213 CC 12 22 34 CT 9 0 9 TT 2 0 2 0.028 0.000 1.638 006329 CC 10 17 27 CT 11 5 16 TT 3 0 3 0.000 0.362 0.090 006357 GG 13 8 21 GT 11 8 19 TT 0 6 6 2.121 1.564 0.263 006368 GG 20 22 42 GT 4 0 4 TT 0 0 0 0.198 0.000 0.095 006844 AA 1 9 10 AG 10 11 21 GG 12 3 15 0.374 0.016 0.266 007082 CC 7 0 7 CT 14 5 19 TT 2 18 20 1.775 0.342 0.481 007096 CC 3 18 21 CT 14 5 19 TT 7 0 7 0.960 0.342 0.598 007115 AA 24 20 44 AT 0 3 3 TT 0 0 0 0.000 0.112 0.051 007744 AA 0 0 0 AC 8 0 8 CC 15 22 37 1.019 0.000 0.428 007781 AA 18 22 40 AG 5 0 5 GG 0 0 0 0.342 0.000 0.156 007799 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 008228 GG 17 23 40 GT 7 0 7 TT 0 0 0 0.700 0.000 0.304 008280 AA 0 0 0 AC 2 0 2 CC 22 23 45 0.045 0.000 0.022 008289 CC 20 23 43 CT 4 0 4 TT 0 0 0 0.198 0.000 0.093 008306 CC 0 0 0 CT 4 0 4 TT 20 23 43 0.198 0.000 0.093 008468 CC 8 7 15 CT 11 13 24 TT 5 3 8 0.114 0.631 0.093 008489 AA 14 9 23 AC 7 13 20 CC 3 1 4 1.642 1.882 0.014 008637 GG 22 23 45 GT 2 0 2 TT 0 0 0 0.045 0.000 0.022 008684 CC 21 23 44 CT 3 0 3 TT 0 0 0 0.107 0.000 0.051 009137 CC 19 12 31 CT 5 7 12 TT 0 2 2 0.324 0.399 0.347 009184 AA 0 0 0 AG 3 0 3 GG 21 21 42 0.107 0.000 0.054 009278 AA 21 21 42 AG 3 0 3 GG 0 0 0 0.107 0.000 0.054 009396 CC 0 0 0 CG 3 0 3 GG 21 22 43 0.107 0.000 0.052 009423 GG 0 0 0 GT 3 0 3 TT 21 22 43 0.107 0.000 0.052 009475 AA 0 0 0 AG 3 0 3 GG 21 22 43 0.107 0.000 0.052 009498 AA 21 22 43 AG 3 0 3 GG 0 0 0 0.107 0.000 0.052 009503 CC 0 0 0 CT 3 0 3 TT 21 22 43 0.107 0.000 0.052 009611 CC 0 0 0 CT 3 1 4 TT 21 20 41 0.107 0.012 0.097 009995 CC 0 0 0 CT 8 2 10 TT 13 21 34 1.163 0.048 0.723 010186 CC 3 0 3 CT 4 3 7 TT 16 20 36 5.497 0.112 6.398 010326 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 010590 CC 8 7 15 CG 11 13 24 GG 5 3 8 0.114 0.631 0.093 010687 AA 0 0 0 AC 1 0 1 CC 20 22 42 0.012 0.000 0.006 010895 CC 14 18 32 CT 7 4 11 TT 0 0 0 0.840 0.220 0.925 010976 AA 5 3 8 AC 9 12 21 CC 7 7 14 0.383 0.362 0.001 010991 AA 7 7 14 AG 9 12 21 GG 5 3 8 0.383 0.362 0.001 011041 CC 7 7 14 CT 9 12 21 TT 5 3 8 0.383 0.362 0.001 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 003037: a