LOCUS AF386077 9077 bp DNA linear PRI 19-JUN-2001 DEFINITION Homo sapiens interleukin 17B (IL17B) gene, complete cds. ACCESSION AF386077 VERSION AF386077.2 GI:14488405 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 9077) AUTHORS Rieder,M.J., Carrington,D.P., Chung,M.-W., Lee,K.L., Poel,C.L., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) Molecular Biotechnology, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA REFERENCE 2 (bases 1 to 9077) AUTHORS Rieder,M.J., Carrington,D.P., Chung,M.-W., Lee,K.L., Poel,C.L., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (19-JUN-2001) Molecular Biotechnology, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA REMARK Sequence update by submitter COMMENT On Jun 19, 2001 this sequence version replaced gi:14326583. To cite this work please use: SeattleSNPs. NHLBI Program for Genomic Applications, UW-FHCRC, Seattle, WA (URL: http://pga.mbt.washington.edu). FEATURES Location/Qualifiers source 1..9077 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" variation 238 /frequency="0.05" /replace="T" variation 670 /frequency="0.15" /replace="C" variation 755 /frequency="0.04" /replace="G" variation 775 /frequency="0.04" /replace="T" repeat_region 954..1130 /rpt_family="MIR" /rpt_type=dispersed variation 1274 /frequency="0.01" /replace="T" repeat_region 1376..1539 /rpt_family="MIR3" /rpt_type=dispersed variation 1718 /frequency="0.01" /replace="G" variation 1748 /frequency="0.04" /replace="A" variation 1803 /frequency="0.01" /replace="T" variation 1845 /frequency="0.14" /replace="C" gene 2030..7031 /gene="IL17B" mRNA join(2030..2091,4271..4560,6696..7031) /gene="IL17B" /product="interleukin 17B" CDS join(2071..2091,4271..4560,6696..6927) /gene="IL17B" /codon_start=1 /product="interleukin 17B" /protein_id="AAK60336.1" /db_xref="GI:14326584" /translation="MDWPHNLLFLLTISIFLGLGQPRSPKSKRKGQGRPGPLAPGPHQ VPLDLVSRMKPYARMEEYERNIEEMVAQLRNSSELAQRKCEVNLQLWMSNKRSLSPWG YSINHDPSRIPVDLPEARCLCLGCVNPFTMQEDRSMVSVPVFSQVPVRRRLCPPPPRT GPCRQRAVMETIAVGCTCIF" variation 2101 /gene="IL17B" /frequency="0.02" /replace="A" variation 2164 /gene="IL17B" /frequency="0.13" /replace="G" repeat_region 2376..2465 /rpt_family="MIR3" /rpt_type=dispersed variation 2676 /gene="IL17B" /frequency="0.01" /replace="G" variation 2832 /gene="IL17B" /frequency="0.40" /replace="A" repeat_region 3136..3434 /rpt_family="AluY" /rpt_type=dispersed variation 3275 /gene="IL17B" /frequency="0.11" /replace="T" variation 3281 /gene="IL17B" /frequency="0.11" /replace="T" variation 3292 /gene="IL17B" /frequency="0.01" /replace="G" variation 3405 /gene="IL17B" /frequency="0.01" /replace="G" variation 3420 /gene="IL17B" /frequency="0.01" /replace="T" variation 3425 /gene="IL17B" /frequency="0.31" /replace="G" variation 3426 /gene="IL17B" /frequency="0.31" /replace="T" variation 3656 /gene="IL17B" /frequency="0.10" /replace="A" repeat_region 3741..4143 /rpt_family="L2" /rpt_type=dispersed variation 3779 /gene="IL17B" /frequency="0.01" /replace="T" variation 3817 /gene="IL17B" /frequency="0.01" /replace="A" variation 3872 /gene="IL17B" /frequency="0.01" /replace="T" variation 4011 /gene="IL17B" /frequency="0.01" /replace="T" variation 4131 /gene="IL17B" /frequency="0.04" /replace="A" variation 4589 /gene="IL17B" /frequency="0.01" /replace="A" repeat_region 4627..4811 /rpt_family="MIR" /rpt_type=dispersed repeat_region 5003..5093 /rpt_family="MER5B" /rpt_type=dispersed variation 5020 /gene="IL17B" /frequency="0.10" /replace="A" repeat_region 5280..5399 /rpt_family="MER3" /rpt_type=dispersed repeat_region 5400..5691 /rpt_family="AluJb" /rpt_type=dispersed repeat_region 5692..5740 /rpt_family="MER3" /rpt_type=dispersed variation 5817 /gene="IL17B" /frequency="0.01" /replace="T" variation 5842 /gene="IL17B" /frequency="0.01" /replace="G" repeat_region 5857..5914 /rpt_family="MER5A" /rpt_type=dispersed repeat_region 5938..5980 /rpt_family="MIR" /rpt_type=dispersed repeat_region 6006..6122 /rpt_family="L2" /rpt_type=dispersed repeat_region 6250..6367 /rpt_family="AluJb" /rpt_type=dispersed repeat_region 6483..6601 /rpt_family="MIR" /rpt_type=dispersed variation 6723 /gene="IL17B" /frequency="0.02" /replace="T" variation 6852 /gene="IL17B" /frequency="0.01" /replace="T" repeat_region 7008..7181 /rpt_family="L3" /rpt_type=dispersed variation 7093 /frequency="0.01" /replace="A" variation 7208..7209 /frequency="0.01" /replace="-" repeat_region 7209..7509 /rpt_family="AluJb" /rpt_type=dispersed variation 7348 /frequency="0.11" /replace="C" variation 7506 /frequency="0.01" /replace="A" repeat_region 7630..7774 /rpt_family="L3" /rpt_type=dispersed variation 7685 /frequency="0.13" /replace="A" repeat_region 7989..8199 /rpt_family="MER5A" /rpt_type=dispersed repeat_region 8242..8542 /rpt_family="AluJb" /rpt_type=dispersed variation 8254 /frequency="0.43" /replace="A" variation 8258 /frequency="0.43" /replace="C" variation 8269 /frequency="0.01" /replace="T" variation 8592 /frequency="0.01" /replace="G" variation 8806 /frequency="0.02" /replace="A" variation 8839 /frequency="0.43" /replace="G" variation 9027 /frequency="0.01" /replace="T" ORIGIN 1 gggaccctga aatctaaagt agcaagcact gcagctggag caggggaagc tgacaagtca 61 gtcctggctt ggggaggcag aagtgagggg tgcgtatttc cagcaggtaa ggagaatgtg 121 ttggtttcag gggtccccca taccccagca tccatctttc agtttgccac tgttctgtgg 181 atatgggagg gtcaccccag ttgcatgtct gtgggacccc actgctagca gcagcagagt 241 gtgtgcagag agccagcaca gaacacagcc aggccgcccg gccagtgggg ctggggctgg 301 gacagcctgc ggtgggggcg gggcccttgt tgcctgagga ggtattttca gagtacccct 361 ccctctggag tttccaacgg tagaatagag ccctgtctag tatttgacca aatatggtgg 421 catctctcat gctcgagccc cagccagcat ctcagttatg ctgtggaagc ctgccccgga 481 cagattaatc ttgtgacatt caggagcgcc tctcaccctg ccttcttccc ctcggacgat 541 tcctgtaaat ggccaagacc ggccctcagc acgacagggc cgtcctcagt atctgttcac 601 aatgcccctc ctctgtcctc ctcacattcc ctcccgccat tcctgcctcc ctgggtggat 661 gtgcccgctt acattgggct gggctgttca cctgaggtga gagacattgg ccagaggagg 721 tggtcagttg agcatgtgat tccaggacct ttggaccctg aggtcatccg acctcacaaa 781 cttgtggcct gaatcttgga ggcctagacc tctctcagca gccaggaggg tgggcctgag 841 ggggttgaag ggagagtcag tagagaaatg agaaccatgc tacctctaat gctaattaga 901 acaactaatg tttataataa ttatacaatt attttataat aatctctata ataaatagct 961 aagtgtttat tgagcactta ctatgtgcca ggtactgttg ccagctattt aacataggtg 1021 atttccttta ttccttatag cagttttaag agggtgccat gattcttccc attctagaga 1081 tgtgggaact gaggctcaga aagatttcag gagggaatgg gccaggccac cgtctacttc 1141 tggatacacc caccatttta tggaggaggg aactgaggct gacagtaaag ctcacatgca 1201 gccacacagt ctctgagagc ggagaccacc ccaggaggga gagtgctgtg tcaggaaggc 1261 caggacaatc agccgtaagt cctcatggat ctgaaacttg gccagagtga gggcgtacag 1321 cttcagaaat atgttcacag caggctgaaa ttgtgcggaa agtctcccaa gaaaaacaac 1381 atggggtggt ggatagagcc ctggatgggg acagggtgag aatagcagct ctgacacctc 1441 taactcactg ttaatagtga caagtccctt tctggctcca gcctcagttt ccttgactgt 1501 gatctagagg ggtggggctt tggtctccta gggctgctga actcacctga ggccggcaga 1561 ggctggagtg cctgaggctg tttccctggg agatggggcc tgtgtcccac tcctggccag 1621 cacaatttga gaacatttgc tctcctgacc aaccaacggc ccatccctcc tccaccctca 1681 accccttgcc atcccctaag caaacgaagc tgattgtctt agctggccct gtgggtgctg 1741 gctgggcggc cggccgcagg ccacaggcgg aggtgccacc ggccagagcc ccaccagaca 1801 cacagggcat tgtccctcgg tcaacagccc ctgggcacct cagctcggct cctggcctgc 1861 ccccacgccc ctcaccgcct gccactgcgc taggctcagc cagctggggg cccaaggctc 1921 ccagctgatg acgagcccac ccactcactc ccccagcagc ccccagttga gctataattg 1981 cttcgctcca tcctgttgct gccattctct cggcggcatc tggggttcca ggcgggcagc 2041 agctgcaggc tgaccttgca gcttggcgga atggactggc ctcacaacct ggtacgtggc 2101 gcttccctgc cgcaccccca ccccttttta agagcccaaa tatgtcagtt tttctttcct 2161 atttattaat ggctgcctct gtttggttta gaatctgcag aggcaacttc tctgtcttct 2221 cccccaggac tagaaagaaa cagagactgg tcactgtagc catggccagc agtgcaggct 2281 cctgaacggg gctcagccgg ggcacactga agccttttca gaccagaggc gtctggggag 2341 atcccggcaa actcagttat cggggttttt ccaaagagac ccggcttctg aggtcctggc 2401 tgtgtgacct tgggcaagtc cttctgtttc tcagtgtccc atctggagag tgagggaggg 2461 ggactttgat tctattctac gtttctccga gtggagagcc agagtttaag aatgccctgt 2521 gagaaactct aaagagagag cctattgtta gggagacatt ttttctgcac tagaatctag 2581 gaccaaaaag gaagaattta gcacttgaat ctctgttgca gattttgtgc cagcaaatac 2641 ctctgccaag aggggctctg ctgaaacttg tttcctaggg tcaagacttg ctgggtagcc 2701 tggataaagc aggcatgggc catggggctg tggggctgtg aggtgaggca tacagggaac 2761 atatggagcc tatctcaatt taagaggagt cagaggtgcc tccatcctgg gagctctgcc 2821 tcacacgcag gcactgtccc ttctctctgg attcctgggg agtctggctt ctgccgggcc 2881 tgagtcctct tccttgtgag ccaaaggctt tcctgatact ctggtgctgg gagggagaag 2941 tggatggcaa tgggtgaggg tgtgtgtgtg tgaggagggc ttgggggatg gctggaagag 3001 ggaaggctca ggggagaagg gcagtgcagg cggacaggac atccttagcc cataacttgc 3061 ccatctcccc agcttcatct catcccctct tcctcccacc cactcttaat caacattcca 3121 ttcgattcag caaagttctt ttttcttttt tttgagagga gtctcgctct gtcgcccagg 3181 ctggagtgca gtggtgtgat ctcggctcac tgcaagctcc gcctcccggg ttcaggccat 3241 tctcctgcct cagcctccca agtagctggg actacaggca cccgccacca cacccggcta 3301 atttttttgt atttttagta gagacggggt ttcacagtgt tagccaggat ggtctcgatc 3361 tcctgacttt gtgatctgcc cgcctcggcc tcccaaagtg ctggcattac aggtgtgagc 3421 caccacgccc ggccacagca aagttcttaa ccagttcaaa cctcctctct catcttcccc 3481 caacccaccc ctcccacacc tgcaagactt caactccctc agcccatgcc tgccatgcct 3541 cacctgacat gtcccttccc cagaaaagtt tcccaggcca ttgtcccagc acagctaagc 3601 aggaggcccc actcttctcc agccacaccc tgaatgggcc catcctggac ttgtcgctag 3661 ggagacttgg gtgtttgtct tcttgttcac tgtcttcctt cttagacata aatgacagaa 3721 gggcagcgat ggggacagcc attcatttac tcagtgagtg ttcactgaat gcatcacgca 3781 gacacgggag atatgacagt gtgtggaaac tgacacgtgc ccccacggag tccatgctga 3841 gttgggggca gacacataaa agaattgtat acacaaactt taagattgaa gtcatgcaag 3901 aggtgtgtgg gttatgagag cccaagaaag tccagaggca tccctaagaa agcgatgcta 3961 aagctgacac gaggggtggg aaggtgtcca ggaggtgaag aggcagaatg ctgcaggcag 4021 aggctgtgca aagtccctgt ggcaggaagg agcatgctga gtgtaagact gagagaagac 4081 cagaggctgg aacacacaag agagaggaaa cagggggtaa tctgaggagg gagagctggg 4141 ggatggtagg cagagtcaga cctgagcctg ggagacccct aagagcaatg ggaaaggacc 4201 atggacccca agtcttggcc cagatagaga cttggctctc ccacctttga cctgtggctt 4261 tcctccccag ctgtttcttc ttaccatttc catcttcctg gggctgggcc agcccaggag 4321 ccccaaaagc aagaggaagg ggcaagggcg gcctgggccc ctggcccctg gccctcacca 4381 ggtgccactg gacctggtgt cacggatgaa accgtatgcc cgcatggagg agtatgagag 4441 gaacatcgag gagatggtgg cccagctgag gaacagctca gagctggccc agagaaagtg 4501 tgaggtcaac ttgcagctgt ggatgtccaa caagaggagc ctgtctccct ggggctacag 4561 gtaggctggg cagtggtggc aagctgtctt tggggggtgg ggacctttcc tgtgccccag 4621 tcattgtaat ggttaagatc tcagattcag aggtctgggt gcttgggttc gaaccctagc 4681 tctgcctctt acttgcctgt gaggctttgg gcaaatggat tagcctttct gggcctcagt 4741 ttcctcaatg taaatggagg caacagtagt acctcagagt cttgttaagt gagatatcca 4801 tgcagagcac tgccctcatt gttcttcaag tctccatgga agtgcctgca aggctttccc 4861 cagatgtcac ttcctctgct ctgtgggcct cggacgccct tctcaggtgt ggcgcttcca 4921 tgcggtgttc cagtctgtct cttatgctgg acctgggcct tcccagtgcc ggcatcagaa 4981 tcacctaggg attcccatgc ccaatccaaa cctccagcgg tgaggcccag gaagtgctat 5041 ttcttatagc tccacgtgat cagggcgcac agcaggctgc gatttgggaa tcaagaccca 5101 ttgccctgga taacgatggc agcagcgtcc tctcttggtt gtagctccgc ttccttgctc 5161 agtgcctgac ccatagtaag gaccaaagat gaaggaaagg gctgaccctg aggtcctcac 5221 tcacaaaccc aggccagaga tttttcagcc acatgacata taccctgaga ctctagaata 5281 gcactgttca ccagaacttt ctgtgatgat gtaaagtcca gtatggtagc cactagcctc 5341 atgcagctac tgagcacttg acatgtggct actgtgactg agggattaac tttgattaat 5401 ttttttattt tttgtttgag acagggtctc actctgttac ccaggctgga gtacagtggc 5461 atggtctcgg ctcactgcag cctctgcctc ctgggctcaa gcaatctttc cacctcagcc 5521 tcccagtagc tgggaccaca ggcatacctg gctgattttt tttttatttt ttgtagagac 5581 aggatctcac tatgttgccc aggctggtct cacactccta agctcaagca atccacctgc 5641 cttggcctcg caaagtgctg agattacagg cgtaagccac catgctcagc ccgattaatt 5701 tgacacatga agctagtggc tactgcattg gacagtgcag ctccagaatg tgaccattgg 5761 aagggtcggt aaagatcctc cagaacggag cttttcacat ctgattgtgc caatgaatca 5821 ctcagggatc tgataaaaat gcagcttcag atttaggagg ttctgcattt ctagcaagct 5881 cccaagcata aggtgatgct aattctacat gtccacaggt ccagttcacc cacttccttg 5941 tcccgtattt agcagatggg gaaaccgagg tgcagaaaag gagaggtcac aaagcaagtc 6001 cctgtatgca aggctccctg agagcaccag gagggaactt gtctgctttg ttcatcaatg 6061 aatacctaaa atctaggaca gaactgctca tgtggtgagc atgtaagtgt tgaatgaatg 6121 gagattaagt cagaatagaa cccagacctc ctgacttctt tgccagtgga aattaggcat 6181 caataaaaat aatccacact ttatttccgt ggattaagtt tcccaacaat ataaacacag 6241 tgggggtggg gcaggcagag ggaggcctta atcacttgag cctggggagg ctgatgctgc 6301 agtaagctgt gactgggcca cttccaccct gggtgacaga gtgagaccct gtctcaaata 6361 aaggaaacac atgagggccc taggtggtag agggctactc cacaatcccc acagcgcaac 6421 ctagtactgg gatgggcatc tggctgcacg aaagaaggaa gctgggtgac tggtgacctt 6481 gaagctggat aaccttgggg ctctcgactt gccttccatg atcttcagtt tcctcacgtg 6541 gaacatggag ttgattactg cctttcctcc agcccaacac agtcttgctg tggaaattaa 6601 aactctgatt aggaaaggca ggggtgtgga gtatgggtgc tgactggccc tttcctgatc 6661 accttccgct ctgctctttc ttctgctccc tgcagcatca accacgaccc cagccgtatc 6721 cccgtggacc tgccggaggc acggtgcctg tgtctgggct gtgtgaaccc cttcaccatg 6781 caggaggacc gcagcatggt gagcgtgccg gtgttcagcc aggttcctgt gcgccgccgc 6841 ctctgcccgc caccgccccg cacagggcct tgccgccagc gcgcagtcat ggagaccatc 6901 gctgtgggct gcacctgcat cttctgaatc acctggccca gaagccaggc cagcagcccg 6961 agaccatcct ccttgcacct ttgtgccaag aaaggcctat gaaaagtaaa cactgacttt 7021 tgaaagcaag actttgggtt tgctttttgt ggcttcgaag tcaaaaccag ggtcagggta 7081 ggaggttcct gggaggtaga tttcagatta atataaagga ggatttttca tcactctgag 7141 ttctccaata ctgaggtggc ctattagaaa ataatgtgtt cacctctacc acctagggcc 7201 atcatgtgtt tcctttattt gagacagggt ctcactctgt cgcccagggt ggaagtggcc 7261 cagtcacagc ttactgcagc atcagcctcc ccaggctcaa gtgatactcg caccttagcc 7321 actcaagtag ctgggattac aggtgtgtgc cactacacca agctaatttt tgtatttttt 7381 gtagatatgg ggtttcacca tgttgcccag gctgatcttc aactcctggg cctctctgca 7441 gatcagactt ctgcccacct cggcctccca aagtgttggg attacaggtg tgagccacca 7501 cacccggccc atgtgtttcc tttaatctgg gtttataagt ctatatttca gccatgttaa 7561 tgtagcttgg ttgctataaa ccaatatagg agttaacaag agttaactct acccacttaa 7621 gggtcactgg aaacaagctc ttttgaggcg gggagctccc catctctgaa agtgttaact 7681 taaagccagg cttctcaaag gtattatgga gcagacccct gctctggttg gagtagatga 7741 tctaaaaagt ctttttcagc tctgagattc tctgcagatc agacttagac ccaaagaaag 7801 gcctccaggt tgccaaagag caggtgcatc agagatagtg catccctgaa atttttatgt 7861 atgcactttt tctgagctga ggattcctgg ttttgaacag acactcgtaa gttgagaagt 7921 gtcaatgtag atcattcttt cttccagccc tgtccaaaag gggatcttat tagatggttt 7981 gctgatatca gtgattctca aactttagtg agcatcagaa tctcctggag ggattgttaa 8041 aacagcttgc ggggccccac atctagaggt tctgattcag gtggaggctg atactttgca 8101 tttttttgca gtgtttttct tgcatttcta atatataaac agttgttccc aggtgatgct 8161 ggtgctgctg gtctgggctc tgcactttga gaaccactgg cttatattaa gatactttgt 8221 tgatcaaaaa tggcagtgtg ttggcttact cctgtaatac cagcacttcg ggaagctgag 8281 gcaggcggat ttcttgagcc tcaggaattt gagaccaggc tgagaaacat ggcaaaacct 8341 catctctaca aacaaaatac aaaaaatagc ccagcatggt ggcatgcgcc tgtaatccca 8401 ggtgttagag aggctgaggt ggaaggatca cttgagccta gggaggttaa ggctgcagtt 8461 agccatgact gtgccactgc actccaccct gggtgacaga gtgagactgt caaaaaaaaa 8521 aaaaaaaaaa aaaagccaaa aacagcagtg tggactaata tatcctaaag cccatgctga 8581 ctcttgatgc aagagtcccc tggatgcaac tccccacttc ccattttgtc ccctagcaat 8641 tcaatcctcc ccctgggccc tctaacccct gcagcaaatc ccaaatcagc tgttctaggg 8701 tctaaaaata ccttccctcc cacaagacag ctgaggggct aagactatat tctgagggta 8761 agaatagcta gcactttaga gttaacttta ataaaagggc caaccgccca ggacaggaat 8821 atgtggcttg gctgctctaa ctttagtgct taaagcagct ttagctctga atgtcttaag 8881 ggtctaattc atgaaaggcc agtgattagg tatgtgcctg cctgggatgg taagtaactt 8941 accttttttg gtattgttct agagtggata ctggttaaaa ttaccccagg aagcttcggc 9001 tgggttccag acacatggaa aacagacttc ctgtgccagc gcatgctgat cccttcagca 9061 gccgcttctc caccctt //