LOCUS AY460616 7422 bp DNA linear PRI 01-DEC-2003 DEFINITION Homo sapiens interleukin 17 (cytotoxic T-lymphocyte-associated serine esterase 8) (IL17) gene, complete cds. ACCESSION AY460616 VERSION AY460616.1 GI:38530096 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 7422) AUTHORS Rieder,M.J., Daniels,R.L., da Ponte,S.H., Hastings,N.C., Ahearn,M.O., Rajkumar,N., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (06-NOV-2003) Genome Sciences, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA COMMENT To cite this work please use: SeattleSNPs. NHLBI HL66682 Program for Genomic Applications, UW-FHCRC, Seattle, WA (URL: http://pga.gs.washington.edu). FEATURES Location/Qualifiers source 1..7422 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" variation 519 /frequency="0.01" /replace="t" repeat_region 563..625 /rpt_family="ERVL" /rpt_type=dispersed repeat_region 640..836 /rpt_family="ERVL" /rpt_type=dispersed variation 903 /frequency="0.85" /replace="" variation 989 /frequency="0.02" /replace="t" variation 1066 /frequency="0.49" /replace="a" variation 1131 /frequency="0.01" /replace="g" variation 1206 /frequency="0.25" /replace="c" variation 1499 /frequency="0.31" /replace="g" variation 1746 /frequency="0.16" /replace="a" variation 1870 /frequency="0.02" /replace="a" gene 1898..6150 /gene="IL17" mRNA join(1898..1969,3114..3316,4567..6150) /gene="IL17" /product="interleukin 17 (cytotoxic T-lymphocyte-associated serine esterase 8)" CDS join(1943..1969,3114..3316,4567..4804) /gene="IL17" /codon_start=1 /product="interleukin 17 (cytotoxic T-lymphocyte-associated serine esterase 8)" /protein_id="AAR23263.1" /db_xref="GI:38530097" /translation="MTPGKTSLVSLLLLLSLEAIVKAGITIPRNPGCPNSEDKNFPRT VMVNLNIHNRNTNTNPKRSSDYYNRSTSPWNLHRNEDPERYPSVIWEAKCRHLGCINA DGNVDYHMNSVPIQQEILVLRREPPHCPNSFRLEKILVSVGCTCVTPIVHHVA" variation 1987 /gene="IL17" /frequency="0.05" /replace="a" variation 2668 /gene="IL17" /frequency="0.03" /replace="g" variation 2670 /gene="IL17" /frequency="0.09" /replace="t" variation 2731 /gene="IL17" /frequency="0.01" /replace="a" variation 3716 /gene="IL17" /frequency="0.97" /replace="" variation 3911 /gene="IL17" /frequency="0.01" /replace="t" repeat_region 4276..4395 /rpt_family="CR1" /rpt_type=dispersed variation 4290 /gene="IL17" /frequency="0.11" /replace="" variation 4485 /gene="IL17" /frequency="0.09" /replace="t" variation 4738 /gene="IL17" /frequency="0.03" /replace="a" variation 4759 /gene="IL17" /frequency="0.02" /replace="t" variation 4963 /gene="IL17" /frequency="0.13" /replace="a" variation 5843 /gene="IL17" /frequency="0.04" /replace="t" variation 6007 /gene="IL17" /frequency="0.02" /replace="g" variation 6049 /gene="IL17" /frequency="0.13" /replace="t" variation 6053 /gene="IL17" /frequency="0.04" /replace="t" variation 6556..6561 /frequency="0.86" /replace="" repeat_region 6723..7014 /rpt_family="L2" /rpt_type=dispersed variation 7065 /frequency="0.18" /replace="c" variation 7105 /frequency="0.01" /replace="a" variation 7106 /frequency="0.17" /replace="t" variation 7129 /frequency="0.03" /replace="t" variation 7150 /frequency="0.06" /replace="a" variation 7157 /frequency="0.03" /replace="g" variation 7168 /frequency="0.06" /replace="" variation 7184 /frequency="0.03" /replace="g" variation 7205 /frequency="0.09" /replace="a" variation 7223 /frequency="0.50" /replace="t" ORIGIN 1 gggtaaggct agaaaggaag ttgtacgaac tcaaatatta attcaaatgc taagaggctt 61 acccttcatt ctgtatgcaa gctaatggca gaagaaaagg cacaattaga gccatgcttt 121 gagaatcatt attgaaagca tgtcgaagat ggtctgaagg aagcaattgg gaaaagcaag 181 catagctcat ccaagtgggt gagagtgtga gttagaggaa gcttggaaat tggtgatgtg 241 agagatgctg cagcttctgg gattgctgcc tggtcgtgtg tagaggaggg gcagtagggc 301 tcattctgaa tcttgtcttg aaaagcacat agatagtgat gccaaaacca ggactacgga 361 aatcacttga agctgtatcc tacctcctcc tccatctgta tctgcttcac ctatcaagga 421 tatctactat tgccactaaa attcaggtgc ttatggcctc cctcattcat cagccagggt 481 ttatctggcc aggaaagaga agccccttca ggcatttgca acagagggag tttaagtcag 541 agaactagtc accctggtag ttgagattgc catcagcaag aagctgttac catttgaagg 601 ctgcagggac aaagggagtg agcagtcctc tgggagactg aggaaggaag ctcctggctt 661 ctccccactt tccactttcc acttcccact tttactcatc tgtcctccaa ttcccttttg 721 gctgagccta gctgaaaccc agctgacagg ggagtttgag caagcagcct ccagggtcag 781 ccctctgagt tacaggtaga gcaggacagg gaggaatgga tctcaggaca aacaggttca 841 ggatccggca aactaatttt acactccagc cattgagttg gaactactgg ccagcctccc 901 cccgagttag catgtagaat atgggatacc agctgagtgc ctgagagtta tcattcacct 961 cagtgggggt aggggcggag aagggtgaca tatagccagc cacatctata tccactggcc 1021 cttccttgtc ctagtcctct gtattcctga gaaggaacta ttctcgagga cctgagtcca 1081 agttcatctt acttagagta cagagaaaag aaccgctaac tccttctctc tttcccccat 1141 catgtctcct ctcctttcta gttctcatca ctctctactc ccccctgccc cccttttctc 1201 catcttcatc acctttgtcc agtctctatc cccattttca attccttcct caaaacacca 1261 agttgcttgg tagcatgcag ggttggaaca tgcctttaac agaaaatctc gtgtctcttg 1321 aacctagtta tttattcctt gagcagagta gatattcaac aaaagaattg ttaaattcaa 1381 ttaaatagga tatatcttat tattaaatat ttttttcatt ttttgtttac ttatatgatg 1441 ggaacttgag tagtttccgg aattgtctcc acaacacctg gccaaggaat ctgtgaggaa 1501 aagaaagatc aaatggaaaa tcaaggtaca tgacaccaga agacctacat gttacttcaa 1561 actttttctt cctcatgaac cattaaaata gagcataact cttctggcag ctgtacatat 1621 gttcataaat acatgatatt gacccatagc atagcagctc tgctcagctt ctaacaagta 1681 agaatgaaaa gaggacatgg tctttaggaa catgaatttc tgcccttccc attttccttc 1741 agaaggagag attcttctat gacctcattg ggggcggaaa ttttaaccaa aatggtgtca 1801 cccctgaacc cactgcgaca cgccacgtaa gtgaccacag aaggagaaaa gccctataaa 1861 aagagagacg atagcgctac attttgtcca tctcatagca ggcacaaact catccatccc 1921 cagttgattg gaagaaacaa cgatgactcc tgggaagacc tcattggtgg tgagtcctgc 1981 actaacgtgc gatgctcttg ctgatttgga ccagatagta tttctggacc gtgggcatga 2041 aacgctgggt tctgactatg gagatccagg aatactgtat atgtaggata ggaaatgaaa 2101 gctttggtag gtatttaagt cattgtgcag cattttcaag aactgataca cagcagtttg 2161 aaagataaga ttaaaactga aagatagcta tattggggct aaaccacaca agaagtgtca 2221 catgatgctg tgcagtaaga aagaaaattt attgaaagtc tgtttttctg agtacaaagg 2281 atttaatata attctcccac ggcatttttc tttaaaatgg gtcactatcc ttgagatttt 2341 gaaagccgta gcagcaacaa cctttgtttc cattatctcg taccatattc tcagtacatt 2401 gaaactatgt attctaacta aacataggta taactgtgtt ttagaataag tggggtttat 2461 attttttaaa tatttaactt caagtatctt ttttgaaatc tgattttatt acagaatcaa 2521 tacatgttaa atttagaaca actggaaaat atacctaaga aaacatgaag gagatcgagt 2581 ttttagttgg atgcctgcca gtagcaccaa cagcacttct agcatgaata ttgataccac 2641 atagattttc tatagctctt tcttccaatg tgaatgtttg acttcacgat gagtttcaca 2701 gaatatggga ctgagaacaa tggtgcagga ggatatttct acctagaaaa tcaaggttat 2761 tattccttcc cagacctgac aatgatgcat gtgctgatag gctaatgaca tgccatgact 2821 tgacattttt attaaaatta ttgccaacca atggataaca tgtctttcct aagtcaaaag 2881 gagaatgttg aaactagttt ttttaaaaaa attttaaagc catggtgtta acattatgtt 2941 ggtcatctac ctagattttt ctctagctga tctgaaaaat gtagtataga ttgtcctgga 3001 acattgtgtg ttctctatga ttagcaatgc atcatcatca caattaattt gtcaaaaaga 3061 accacatagt aatctaatct ccaacctctc tctcctttcc cattcaattc tagtcactgc 3121 tactgctgct gagcctggag gccatagtga aggcaggaat cacaatccca cgaaatccag 3181 gatgcccaaa ttctgaggac aagaacttcc cccggactgt gatggtcaac ctgaacatcc 3241 ataaccggaa taccaatacc aatcccaaaa ggtcctcaga ttactacaac cgatccacct 3301 caccttggaa tctccagtac gtaaagcttc cagataaaaa tgctatattc ttcatccctc 3361 ttatgcatca gactgccagt taaatctccc tgaggatgat tttattcatt tagaattacc 3421 agtcaaacct ggaaggacca ctgtgaagag caattctcaa actttctaca gatttcttta 3481 accaagcaca ggacagcctc caataatccc tatcctgtta gatctaattg tcactgacac 3541 caataatcaa cccaaattaa ttataatcat tattctaata tttatgagac cccaagtcta 3601 ttctttattt attcaaagaa tagacattta tcaaagagga ttaatgcttt tattatctta 3661 accagagctg ccattgagaa gatttattgc aaataattaa taattagggt ttttttactt 3721 ttattctttt gcttattttt gtttttgaat cccagtggaa taagtatcac tggggtattt 3781 ctaccccttt gtgtgttaaa tagtcttgat ctacttccta acatacctat gcttgctgta 3841 tccttagtat acccagtatt tagaccccat caagggttaa ataccaaatg tattttgatc 3901 atttgacttc atacaaataa gtctctgttc tgtggagcct acagattggt ctgattgtag 3961 gatttcttct cttcttccca ttactaggaa gagtcaaaat aaatcaattc aaaaatgcaa 4021 gcaaatcatt cactgatcta aaagagagag ggaagagaag gtcatagaga cacttaacct 4081 tttgtttcca gccctttatc tcagctctgg gctctgtccc acgaatgtga tctcagataa 4141 aattttgatg tattccctct tcaaagacag acttcatcaa gtcaaataaa cagctatctt 4201 attctagatg gttccaagtc tactcttcct ttggtcttct tctgtctgtc aaatgtaccc 4261 taaaaaagct atcatttgtg tcaaacttaa attttttctg tggcctcagt ctatcttatt 4321 ttattcattc ttcaaataaa ttggagaaaa actgatcact gtcttctttt ctataacaat 4381 tcacgtgctt gaaaaaaaaa tccaatttgt ccccaaagtt cttcttcaaa ctaacatcat 4441 ttaaagaatt tgcaatgcct ataatttgtc atcctgtgaa cttgcctctc ttcatgtatt 4501 cctgttttat ttctttccca ctttaccagg aattcacttt cctcctgatt tttctcccct 4561 ctgcagccgc aatgaggacc ctgagagata tccctctgtg atctgggagg caaagtgccg 4621 ccacttgggc tgcatcaacg ctgatgggaa cgtggactac cacatgaact ctgtccccat 4681 ccagcaagag atcctggtcc tgcgcaggga gcctccacac tgccccaact ccttccggct 4741 ggagaagata ctggtgtccg tgggctgcac ctgtgtcacc ccgattgtcc accatgtggc 4801 ctaagagctc tggggagccc acactcccca aagcagttag actatggaga gccgacccag 4861 cccctcagga accctcatcc ttcaaagaca gcctcatttc ggactaaact cattagagtt 4921 cttaaggcag tttgtccaat taaagcttca gaggtaacac ttggccaaga tatgagatct 4981 gaattacctt tccctctttc caagaaggaa ggtttgactg agtaccaatt tgcttcttgt 5041 ttactttttt aagggcttta agttatttat gtatttaata tgccctgaga taactttggg 5101 gtataagatt ccattttaat gaattaccta ctttattttg tttgtctttt taaagaagat 5161 aagattctgg gcttgggaat tttattattt aaaaggtaaa acctgtattt atttgagcta 5221 tttaaggatc tatttatgtt taagtattta gaaaaaggtg aaaaagcact attatcagtt 5281 ctgcctaggt aaatgtaaga tagaattaaa tggcagtgca aaatttctga gtctttacaa 5341 catacggata tagtatttcc tcctctttgt ttttaaaagt tataacatgg ctgaaaagaa 5401 agattaaacc tactttcata tgtattaatt taaattttgc aatttgttga ggttttacaa 5461 gagatacagc aagtctaact ctctgttcca ttaaaccctt ataataaaat ccttctgtaa 5521 taataaagtt tcaaaagaaa atgtttattt gttctcatta aatgtatttt agcaaactca 5581 gctcttccct attgggaaga gttatgcaaa ttctcctata agcaaaacaa agcatgtctt 5641 tgagtaacaa tgacctggaa atacccaaaa ttccaagttc tcgatttcac atgccttcaa 5701 gactgaacac cgactaaggt tttcatacta ttagccaatg ctgtagacag aagcattttg 5761 ataggaatag agcaaataag ataatggccc tgaggaatgg catgtcatta ttaaagatca 5821 tatggggaaa atgaaaccct ccccaaaata caagaagttc tgggaggaga cattgtcttc 5881 agactacaat gtccagtttc tcccctagac tcaggcttcc tttggagatt aaggcccctc 5941 agagatcaac agaccaacat ttttctcttc ctcaagcaac actcctaggg cctggcttct 6001 gtctgatcaa ggcaccacac aacccagaaa ggagctgatg gggcagaacg aactttaagt 6061 atgagaaaag ttcagcccaa gtaaaataaa aactcaatca cattcaattc cagagtagtt 6121 tcaagtttca catcgtaacc attttcgccc ccatggccca tgtgctgtct tgccctactt 6181 ctgaaggcct ctagatattc tcaggccact ctgcaggctc cctgcttctt gaaagacctt 6241 cctcttcact ccatcctgct ccatccagtg tgctccagcc cacccagagg cccatggctt 6301 ttctaggctt ctttccctat tccaaatcca ggggttggcc tctccagcca cctcctctca 6361 gtcattttgt gctcacatct tgattcctgt gaccatccct gtcaccattt tcctacagga 6421 aatccccagg cagcttccag ggacagttcc tcacagcctt tacgctttca agcttctcac 6481 taaaaacctg ctgctcgttt tcaagctttc tctgaacggt gatgatgaaa agaaaaaatt 6541 gtttttgttt ttgtttttgt tgggagaggg agttgtaaag gatgtatatg tctatatgtg 6601 tgtgtgtgtg tgtgtgtgtg gtcctgaacc attatttccc actagatttt gggtgggggg 6661 tatgcggatg ggaagaggca gttgctttcc atgtactcct cccctgatac actttgcttt 6721 tattctctct tcattttccc cagttagcac taccatgtac ctagtcatcc aagctagaaa 6781 tctatgtggc ttccctgaat ctttttcctt ctgcctctcc ctcattccta acatccacat 6841 atcaccaaat actatattct cacttccaaa agttctccaa ggaaccccca cctccccacc 6901 aataccatac tacccaggtt caggactgca tctattctca tttctctcct ccatgattgc 6961 tacaaccttc cacctgttct tgctgccatt gttcccttct ctcaatccat cctccgacct 7021 gtacctatga cacaaattca aatataacaa aaagcgcccc ccagaaatct ggccttgctc 7081 cctctcctgt tctatcccag ggtgcctcat ccttgacgtt ttaccctcga gtcgtggtga 7141 agttgttgcg gagaccacca tgctattctt ggccttgatg cctatgctat gtggtccctt 7201 ctgcgtgaat gcccttgcca ccttccccct gctatccctc cagtcacacg ctgccctccc 7261 cactctcccc catttctatg gctctactca catattaaaa ctttctttag gtctcatctt 7321 ctctaaggag actcctggac ccatcactgc ctgttatcct agattaggtc cctctctttc 7381 ttacgggctc caaaagcact gtgcagatcc tttatcactg ac //