Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000357 AA 0 0 0 AG 1 0 1 GG 21 23 44 0.012 0.000 0.006 000423 CC 22 15 37 CT 0 8 8 TT 0 0 0 0.000 1.019 0.428 000424 CC 0 0 0 CG 2 0 2 GG 20 23 43 0.050 0.000 0.023 000521 CC 7 6 13 CT 12 15 27 TT 3 2 5 0.362 2.738 2.574 000702 CC 0 0 0 CT 0 5 5 TT 22 18 40 0.000 0.342 0.156 000723 -- 0 0 0 +- 1 0 1 ++ 20 23 43 0.012 0.000 0.006 000808 CC 19 23 42 CG 2 0 2 GG 0 0 0 0.053 0.000 0.024 000810 CC 21 22 43 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 000980 AA 0 0 0 AG 4 0 4 GG 20 23 43 0.198 0.000 0.093 001007 -- 0 0 0 +- 1 2 3 ++ 17 18 35 0.015 0.055 0.064 001386 CC 0 0 0 CG 1 11 12 GG 23 12 35 0.011 2.272 1.007 001544 AA 16 14 30 AC 8 8 16 CC 0 0 0 0.960 1.086 2.039 001899 AA 22 20 42 AT 1 0 1 TT 0 0 0 0.011 0.000 0.006 001985 AA 0 0 0 AC 2 9 11 CC 21 11 32 0.048 1.686 0.925 002090 CC 22 20 42 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 002215 AA 0 2 2 AT 9 8 17 TT 14 10 24 1.361 0.045 0.217 002408 CC 0 0 0 CT 3 0 3 TT 18 20 38 0.124 0.000 0.059 003017 AA 0 0 0 AG 1 0 1 GG 21 23 44 0.012 0.000 0.006 003179 AA 0 0 0 AC 0 1 1 CC 20 22 42 0.000 0.011 0.006 003411 CC 20 19 39 CG 1 0 1 GG 0 0 0 0.012 0.000 0.006 003453 CC 2 1 3 CT 9 8 17 TT 10 10 20 0.000 0.140 0.056 003557 CC 20 19 39 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 003906 AA 0 0 0 AG 8 8 16 GG 13 11 24 1.163 1.351 2.500 003959 CC 0 0 0 CG 4 0 4 GG 17 20 37 0.233 0.000 0.108 004106 CC 14 18 32 CG 7 2 9 GG 0 0 0 0.840 0.055 0.623 004288 CC 15 17 32 CG 8 2 10 GG 0 0 0 1.019 0.059 0.767 004663 -- 1 0 1 +- 4 8 12 ++ 18 11 29 1.252 1.351 0.034 004954 CC 13 18 31 CT 9 0 9 TT 0 0 0 1.455 0.000 0.643 005122 AA 0 0 0 AG 1 0 1 GG 21 19 40 0.012 0.000 0.006 005233 CC 0 0 0 CG 8 3 11 GG 16 19 35 0.960 0.118 0.848 005723 CC 17 18 35 CT 7 3 10 TT 0 0 0 0.700 0.124 0.703 006097 AA 0 0 0 AG 7 4 11 GG 17 18 35 0.700 0.220 0.848 006791 AA 0 0 0 AG 2 0 2 GG 18 19 37 0.055 0.000 0.027 006842 CC 13 19 32 CT 7 0 7 TT 0 0 0 0.900 0.000 0.379 007260 AA 8 12 20 AG 11 8 19 GG 1 1 2 1.286 0.053 0.900 007435 -- 15 18 33 +- 8 3 11 ++ 0 0 0 1.019 0.124 0.898 007725 AA 0 0 0 AG 8 10 18 GG 15 12 27 1.019 1.903 2.812 008583 CC 0 0 0 CT 6 11 17 TT 12 10 22 0.720 2.644 3.029 009173 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 009264 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 009323 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 009496 GG 15 12 27 GT 8 11 19 TT 0 0 0 1.019 2.272 3.116 010860 CC 19 14 33 CT 5 9 14 TT 0 0 0 0.324 1.361 1.439 011012 CC 17 19 36 CT 7 2 9 TT 0 0 0 0.700 0.053 0.556 011022 CC 1 1 2 CT 13 8 21 TT 10 12 22 1.630 0.053 1.197 011050 GG 6 5 11 GT 13 11 24 TT 5 5 10 0.174 0.048 0.203 011069 -- 0 0 0 +- 7 1 8 ++ 17 19 36 0.700 0.013 0.440 011107 CC 19 19 38 CT 0 1 1 TT 0 0 0 0.000 0.013 0.007 011359 AA 0 0 0 AG 1 0 1 GG 23 21 44 0.011 0.000 0.006 011436 CC 0 0 0 CT 1 0 1 TT 23 22 45 0.011 0.000 0.006 011527 CC 0 0 0 CT 8 8 16 TT 16 14 30 0.960 1.086 2.039 011859 AA 14 17 31 AG 8 3 11 GG 1 0 1 0.011 0.131 0.000 012252 CC 23 21 44 CG 1 0 1 GG 0 0 0 0.011 0.000 0.006 012570 CC 15 19 34 CT 8 3 11 TT 1 0 1 0.003 0.118 0.010 012685 AA 0 0 0 AC 9 3 12 CC 15 19 34 1.278 0.118 1.035 012698 AA 0 0 0 AG 2 0 2 GG 22 22 44 0.045 0.000 0.023 012729 GG 0 0 0 GT 9 3 12 TT 15 19 34 1.278 0.118 1.035 012876 AA 0 0 0 AG 9 3 12 GG 15 19 34 1.278 0.118 1.035 013053 CC 0 0 0 CT 0 1 1 TT 24 19 43 0.000 0.013 0.006 013400 AA 0 0 0 AG 9 0 9 GG 15 23 38 1.278 0.000 0.527 013507 -- 0 0 0 +- 0 1 1 ++ 23 22 45 0.000 0.011 0.006 013754 AA 0 0 0 AC 8 3 11 CC 14 20 34 1.086 0.112 0.872 013815 CC 13 20 33 CG 10 3 13 GG 0 0 0 1.775 0.112 1.246 013903 AA 14 20 34 AG 9 3 12 GG 0 0 0 1.361 0.112 1.035 014089 AA 0 0 0 AG 4 0 4 GG 19 23 42 0.209 0.000 0.095 014251 CC 0 0 0 CG 9 3 12 GG 14 20 34 1.361 0.112 1.035 014266 CC 16 20 36 CT 7 3 10 TT 0 0 0 0.741 0.112 0.684 014480 CC 15 16 31 CT 7 3 10 TT 0 0 0 0.787 0.140 0.791 014515 AA 0 0 0 AG 0 1 1 GG 22 19 41 0.000 0.013 0.006 014574 CC 21 20 41 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 014682 AA 0 0 0 AG 1 0 1 GG 21 18 39 0.012 0.000 0.006 014911 GG 0 0 0 GT 1 3 4 TT 20 17 37 0.012 0.131 0.108 014965 CC 20 20 40 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 014970 AA 20 11 31 AT 1 9 10 TT 0 0 0 0.012 1.686 0.791 014985 CC 0 0 0 CT 4 0 4 TT 17 20 37 0.233 0.000 0.108 015004 GG 0 0 0 GT 1 0 1 TT 20 20 40 0.012 0.000 0.006 015033 CC 0 0 0 CT 1 0 1 TT 20 20 40 0.012 0.000 0.006 015223 CC 21 17 38 CT 0 3 3 TT 0 0 0 0.000 0.131 0.059 015417 GG 14 10 24 GT 6 8 14 TT 0 0 0 0.623 1.469 1.938 015800 GG 12 14 26 GT 11 7 18 TT 0 2 2 2.272 0.616 0.261 016205 GG 24 22 46 GT 0 1 1 TT 0 0 0 0.000 0.011 0.005 016242 CC 1 1 2 CT 10 16 26 TT 13 5 18 0.296 5.594 3.763 016468 CC 17 14 31 CT 3 7 10 TT 0 0 0 0.131 0.840 0.791 016607 AA 0 0 0 AG 2 7 9 GG 21 11 32 0.048 1.049 0.623 017859 CC 21 14 35 CT 3 9 12 TT 0 0 0 0.107 1.361 1.007 018169 GG 0 0 0 GT 5 0 5 TT 19 23 42 0.324 0.000 0.148 018400 AA 0 0 0 AG 1 0 1 GG 23 22 45 0.011 0.000 0.006 018564 CC 0 3 3 CT 10 11 21 TT 14 5 19 1.662 0.555 0.769 018591 AA 15 17 32 AG 9 2 11 GG 0 0 0 1.278 0.059 0.925 018753 AA 14 11 25 AT 9 11 20 TT 0 0 0 1.361 2.444 3.673 018803 AA 0 0 0 AG 1 0 1 GG 22 22 44 0.011 0.000 0.006 018848 CC 8 4 12 CT 10 13 23 TT 5 5 10 0.306 0.747 0.026 018849 CC 8 4 12 CT 10 13 23 TT 5 5 10 0.306 0.747 0.026 018985 AA 14 22 36 AG 9 0 9 GG 0 0 0 1.361 0.000 0.556 019200 AA 19 22 41 AG 4 0 4 GG 0 0 0 0.209 0.000 0.097 019331 CC 6 4 10 CT 13 13 26 TT 4 5 9 0.445 0.747 1.097 019458 CC 21 22 43 CT 2 0 2 TT 0 0 0 0.048 0.000 0.023 019676 -- 0 0 0 +- 1 0 1 ++ 22 22 44 0.011 0.000 0.006 019938 AA 19 22 41 AG 1 0 1 GG 0 0 0 0.013 0.000 0.006 020001 CC 20 22 42 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 020450 CC 21 20 41 CG 3 0 3 GG 0 0 0 0.107 0.000 0.055 020640 AA 0 0 0 AG 1 0 1 GG 23 20 43 0.011 0.000 0.006 020804 AA 24 18 42 AG 0 1 1 GG 0 0 0 0.000 0.014 0.006 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000723: A 001007: A 004663: a 007435: GT 011069: C 013507: a 019676: a