IL13 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
TTTTGCTTAC TACGGCCAGT TTCTCCCGTT ACATAAGGCC ACCCCCCTAT
50
CTCCGCGGGC CATCGCCGCC GCAACCGCCG CGCCAGCGCC TTCTCCCACG
100
CGCGGGGGCG CCCCTGCCCA CCGCTCCCGG CAGGGCTTTT GGTGGCCATG
150
GGGGATAAGG GGCGTTGACT CACCCGGGCG GGGCTCCGGG AGTTGCACAG
200
ACCAAGGTAG TTCCCCGCTC CTTCCCCCAT CACGGAGACC CTGTGGGAGA
250
TGCCGTGGGC CCTCTACTAC AGATTAGGAA ACAGGCCCGT AG
A
GGGGT
C
A
300 |
var(293):[C:0.14]
|
var(299):[-:0.10]
CACGGCCAAG TAGCGGCACT CCAGGCACTG GGGGCCCTCG AGGGGAAGGG
350
GCAGACTTCT GGGAGTCAGA GCCAGCAGCT GGGCTGGGAA GCTTCGAGTG
400
TGGACAGAGA GGGTGGGAAT GACGTTCCCT GTGGGAAGAG AGGGTGGGCA
450
AGCCTGGGAT GCCTCTGAGC GGGAATCCAG CATGCCTTGT G
A
GGAGGGTC
500 |
var(492):[G:0.15]
ACAAGCACAC CCTTGTGAGG AGGTTGAGCC CCATCGAGGA CAGGACGGAG
550
GGAGCCTGAG CAGGCAGAGA GGGGGCCTGG GGAGGCGCTG GTTCGGGGAG
600
GAAGTGGGTA GGGGAGAAAT CTTGACATCA ACACCCAACA GGCAAATGCC
650
GTGGCCTCTG C
T
GTGGGGGT TTCTGGAGGA CTTCTAGGAA AA
C
GAGGGAA
700 |
var(662):[A:0.01]
|
var(693):[T:0.22]
GAGCAGGAAA AGGCGACATG GCTGCAGGGG CCAAGCCCAG GAGCCGCCCT
750
CCACAGCACT CATTCTGCAG AAGGGAAATT TGAGGCCCCC AGAC
G
GCAGG
800 |
var(795):[A:0.01]
GGTTGATCCT GCAGAGACTG GTGAGCAAAG GGGATCACCC CAAGCCCCAG
850
TGGCACTAGG AACACTTACA ATCTCTGACC TGGACTAAGG CTGCCAGCCT
900
GGCCCAGTTA AGAGTTTCCC AGAAGGATGG CCCATACACT TTAAATTAAA
950
GGGGCCAGAC ACGTGCACAC
T
A
C
T
T
C
C
A
G
C
C
A
C
T
C
T
G
G
A
A
G
C
T
G
A
G
G
T
G
G
1000 |
REPEAT
G
G
G
G
A
T
C
G
C
T
T
G
A
G
T
C
T
G
G
G
A
G
T
T
G
G
A
G
G
C
C
A
G
C
C
T
A
G
G
C
A
G
G
C
A
A
C
A
T
A
1050 |
var(1008):[A:0.02]
G
T
G
A
G
A
C
C
C
C
A
T
C
T
C
C
A
A
A
A
A
A
A
C
A
A
A
A
C
A
A
A
A
C
A
A
A
A
C
A
A
A
A
A
A
A
C
A
C
C
1100 |
var(1090):[G:0.05]
A
A
A
A
A
A
GCTC CCAGAAAGAC CTCTGAATCT TTCTGGATCT CTCAGTGGAG
1150
ACCTGGAA
A
T CTGAACTTTG ACAATCCCTC TCACAGTGGG GCCAAGGAGG
1200 |
var(1159):[G:0.07]
AATTAGGCAA GCCAAAAGAA GTGAACTTTA CTCTTCTATT GCCTGTTTGA
1250
ATTTTGTATC CAAGCAAGTG TTACTTAAGT AATTTAAGAG ACTGGTTCAT
1300
CGAAAAAATA AAACTCCCCA AATTCCCATA GCTGG
T
AGAC TGTGGTCACA
1350 |
var(1336):[C:0.01]
GCCACAGTGC ACTAAGACTA TCTGCTCAGC ACTTCTGGTG ACCCAAAAGG
1400
GTCTGAGGAC AGGAGCTCAG AGTTGGGTCA GCTGTCCAGG TACTCAGGGT
1450
TGTCACAGGC AAAACTGCTG GAACTCAGGG CAGCATTGCA AATGCCACGC
1500
CGCTCTCAGG GCCCCTTGCC TGCCGCTGGA ATTAAACCCA CCCAGATCTT
1550
GGAAACTCTG CCCTGGACCC TTCTCAATAA GTCCATGAGA AATCAAACTC
1600
TTTCCTTTAT GCGACACTGG ATTTTCCACA AAGTAAAATC AAGATGAGTA
1650
AAGATGTGGT TTCTAGATAG TGCCTGAAAA AGCAGAGACC ATGGTGTCAG
1700
GCGTCACCAC TTGGGCCTAT AAAAGCTGCC ACAAGACGCC AAGGCCAC
A
A
1750 | Exon 1 |
UTR
G
C
C
A
C
C
C
A
G
C
C
T
A
T
G
C
A
T
C
C
G
C
T
C
C
T
C
A
A
T
C
C
T
C
T
C
C
T
G
T
T
G
G
C
A
C
T
G
G
G
1800
C
C
T
C
A
T
G
G
C
G
C
T
T
T
T
G
T
T
G
A
C
C
A
C
G
G
T
C
A
T
T
G
C
T
C
T
C
A
C
T
T
G
C
C
T
T
G
G
C
G
1850
M A L L L T T V I A L T C L G 15
G
C
T
T
T
G
C
C
T
C
C
C
C
A
G
G
C
C
C
T
G
T
G
C
C
T
C
C
C
T
C
T
A
C
A
G
C
C
C
T
C
A
G
G
G
A
G
C
T
C
1900
G F A S P G P V P P S T A L R E L 32
A
T
T
G
A
G
G
A
G
C
T
G
G
T
C
A
A
C
A
T
C
A
C
C
C
A
G
A
A
C
C
A
G
A
A
G
GTGA GTGTCGGCTA
1950
I E E L V N I T Q N Q K 44
GCCAGGGTCC TAGCTATGAG GGCTCCAGGG TGGGTGATTC CCAAGATGAG
2000
GTCATGAGCA GGCTGGGCCT GGTCCTAAGA TGCCTGTAGG TCAGGAAAAA
2050
TCTCCATGGA CCAAGGCCCG GCCCAGCCAT GAGGGAGAGA GGAGCTGGGC
2100
TGGGGGGCTC AGCACTGTGG ATGGACCTAT GGAGGTGTCT GGCAGACTCC
2150
CCAGGGACTA CCTGCTCTCC TGGCCTGGCC TTGTCTGCCA CTGCCAGCTC
2200
CTACTCAGCC ATTCCTGAAC AGAGGACAGC AGAGAAGGGC CAGCACCCTC
2250
CCAGAACCAT GTGGCATTTG CCAACTGGAT TTTGACCATA ACAATGCAGC
2300
CATTCTCCCC AGCACCAT
C
A TAGGCCCGCC CTTACAGGAG GATTC
G
TTAG
2350 |
var(2319):[A:0.12]
|
var(2346):[C:0.12]
TAGAGTCCGC TCCTTGCCCC ACT
A
G
T
A
A
C
A
G
C
T
C
A
C
A
T
G
T
C
T
G
A
G
C
A
C
T
G
2400 |
REPEAT
C
T
T
A
C
A
C
C
A
G
G
C
C
T
G
G
T
G
C
A
C
G
T
G
C
T
T
T
A
T
G
T
G
T
C
A
T
T
T
C
A
T
C
A
C
T
G
C
C
A
2450
G
C
C
A
C
C
T
C
A
A
G
A
G
G
C
A
G
G
T
A
C
G
A
T
G
A
A
C
C
C
A
T
T
C
T
G
C
T
A
A
G
G
T
T
C
A
G
T
G
A
2500
G
G
T
T
A
A
G
T
G
A
C
A
G
A
G
G
C
T
G
G
A
T
T
C
A
A
G
C
C
A
G
G
C
C
T
G
G
C
C
A
A
C
A
C
C
A
G
A
G
T
2550
G
T
C
C
A
T
G
C
T
C
C
T
A
A
C
T
G
C
A
G
T
G
T
T
CCCTCA CCATCAGAAG GCAGGGCATT
2600 |
var(2553):[T:0.16]
TAATACACCA GATCCCCACC GCCTCCCATC TGATTTGTCT TG
G
TCAACAG
2650 |
var(2643):[C:0.01]
TGGCCCAGGC CACTCCTACT TCACTCGTCC CCACCCTGGC CCTTCCCGCA
2700
GGCCCCTGTC CTCCTGCCCT GACTATGGCA AGCCTTGCAT GCAGCTTGTC
2750
CCTTACTAGT GGTGTCAATT TTTTTCTCTC AGCTCCAAGA CCCTAAACAG
2800
TGGGACCTCA CCCCTATGCC TGCTGTTCAA AGCAGAAAAC GAAGCTCAGG
2850
AATGCTGAGG GGCTGCCAGG CCTGCCTCTG TGCCACACCA GGGATGCTTG
2900
TGGGGCCTGT GCTGGGGCAG ACCTGGCCTG GGCTGCCAGG GCAGGCCCAC
2950
AACCCCTGCC AG
C
ACTCTGC TCACTGTCAC TTTGCTCCCA CAG
G
C
T
C
C
G
C
3000 |
var(2963):[T:0.04]
| Exon 2
A P 46
T
C
T
G
C
A
A
T
G
G
C
A
G
C
A
T
G
G
T
A
T
G
G
A
G
C
A
T
C
A
A
C
C
T
G
A
C
A
G
C
T
G
G
C
A
T
G
GTA
3050
L C N G S M V W S I N L T A G M 62
AGGACCTTTG GGTGCAGGGA GGATGGGGCA GAGGCTCCAG GCCTTGGGCT
3100
TATCTTCTCT GAGCCTCCCT TCCATGGCTG GGGTTCCAAG CAAGCTTCAA
3150
GTGCTCTCCT CCCTCCCGCC ATAATCTGGC CCCTTCCCGC CCACCACCCA
3200
GACTCACCTG CGCCAGGCAT CTCAGCCCCA TCTTCCTGCA GACTCACAAA
3250
AGGCAGCTGC CCAAGCAGGG CCTGACCCCT CGGTGTCCCC TCCCCACAG
T
3300 | Exon 3
62
A
C
T
G
T
G
C
A
G
C
C
C
T
G
G
A
A
T
C
C
C
T
G
A
T
C
A
A
C
G
T
G
T
C
A
G
G
C
T
G
C
A
G
T
G
C
C
A
T
C
3350
Y C A A L E S L I N V S G C S A I 79
G
A
G
A
A
G
A
C
C
C
A
G
A
G
G
A
T
G
C
T
G
A
G
C
G
G
A
T
T
C
T
G
C
C
C
G
C
A
C
A
A
G
G
T
C
T
C
A
G
C
3400
E K T Q R M L S G F C P H K V S A 96
T
G
G
G
GTAAGG CATCCCCCAC CCTCTCACAC CCACCCTGCA CCCCCTCCTG
3450
G 97
CCAACCCTGG GCTCGCTGAA GGGAAGCTGG CTGAATATC
C
ATGGTGTGTG
3500 |
var(3490):[T:0.02]
TCCACCCAGG GGTGGGGCCA TTGTGGCAGC AGGGACGTGG CCTTCGGGAT
3550
TTACAGGATC TGGGCTCAAG GGCT
C
C
T
A
A
C
T
C
C
T
A
C
C
T
G
G
G
C
C
T
C
A
A
T
T
T
3600 |
REPEAT
C
C
A
C
A
T
C
T
G
T
A
C
A
G
T
A
G
A
G
G
T
A
C
T
A
A
C
A
G
T
A
C
C
C
A
C
C
T
C
A
T
G
G
G
G
A
C
T
T
C
3650
C
G
T
G
A
G
G
A
C
T
G
A
A
T
G
A
G
A
C
A
G
T
C
C
C
T
G
G
A
A
A
G
C
C
C
C
T
G
G
T TTGTGC
G
AGT
3700 |
var(3697):[A:0.06]
CGTCCCGGCC TCTGGCGTTC TACTCA
C
GTG CTGACCTCTT TGTCCTGCAG
3750 |
var(3727):[T:0.46]
97
C
A
G
T
T
T
T
C
C
A
G
C
T
T
G
C
A
T
G
T
C
C
G
A
G
A
C
A
C
C
A
A
A
A
T
C
G
A
G
G
T
G
G
C
C
C
A
G
T
T
3800 | Exon 4
Q F S S L H V R D T K I E V A Q F 114
T
G
T
A
A
A
G
G
A
C
C
T
G
C
T
C
T
T
A
C
A
T
T
T
A
A
A
G
A
A
A
C
T
T
T
T
T
C
G
C
G
A
G
G
G
A
C
G
G
T
3850 |
var(3848):[A:0.20]
V K D L L L H L K K L F R E G R 130
T
C
A
A
C
T
G
A
A
A
C
T
T
C
G
A
A
A
G
C
A
T
C
A
T
T
A
T
T
T
G
C
A
G
A
G
A
C
A
G
G
A
C
C
T
G
A
C
T
A
3900 |
UTR
|
var(3895):[C:0.02]
F N 132
T
T
G
A
A
G
T
T
G
C
A
G
A
T
T
C
A
T
T
T
T
T
C
T
T
T
C
T
G
A
T
G
T
C
A
A
A
A
A
T
G
T
C
T
T
G
G
G
T
A
3950
G
G
C
G
G
G
A
A
G
G
A
G
G
G
T
T
A
G
G
G
A
G
G
G
G
T
A
A
A
A
T
T
C
C
T
T
A
G
C
T
T
A
G
A
C
C
T
C
A
G
4000
C
C
T
G
T
G
C
T
G
C
C
C
G
T
C
T
T
C
A
G
C
C
T
A
G
C
C
G
A
C
C
T
C
A
G
C
C
T
T
C
C
C
C
T
T
G
C
C
C
A
4050
G
G
G
C
T
C
A
G
C
C
T
G
G
T
G
G
G
C
C
T
C
C
T
C
T
G
T
C
C
A
G
G
G
C
C
C
T
G
A
G
C
T
C
G
G
T
G
G
A
C
4100
C
C
A
G
G
G
A
T
G
A
C
A
T
G
T
C
C
C
T
A
C
A
C
C
C
C
T
C
C
C
C
T
G
C
C
C
T
A
G
A
G
C
A
C
A
C
T
G
T
A
4150
G
C
A
T
T
A
C
A
G
T
G
G
G
T
G
C
C
C
C
C
C
T
T
G
C
C
A
G
A
C
A
T
G
T
G
G
T
G
G
G
A
C
A
G
G
G
A
C
C
C
4200
A
C
T
T
C
A
C
A
C
A
C
A
G
G
C
A
A
C
T
G
A
G
G
C
A
G
A
C
A
G
C
A
G
C
T
C
A
G
G
C
A
C
A
C
T
T
C
T
T
C
4250
T
T
G
G
T
C
T
T
A
T
T
T
A
T
T
A
T
T
G
T
G
T
G
T
T
A
T
T
T
A
A
A
T
G
A
G
T
G
T
G
T
T
T
G
T
C
A
C
C
G
4300
T
T
G
G
G
G
A
T
T
G
G
G
G
A
A
G
A
C
T
G
T
G
G
C
T
G
C
T
G
G
C
A
C
T
T
G
G
A
G
C
C
A
A
G
G
G
T
T
C
A
4350 |
var(4329):[A:0.11]
G
A
G
A
C
T
C
A
G
G
G
C
C
C
C
A
G
C
A
C
T
A
A
A
G
C
A
G
T
G
G
A
C
C
C
C
A
G
G
A
G
T
C
C
C
T
G
G
T
A
4400 |
var(4384):[A:0.33]
A
T
A
A
G
T
A
C
T
G
T
G
T
A
C
A
G
A
A
T
T
C
T
G
C
T
A
C
C
T
C
A
C
T
G
G
G
G
T
C
C
T
G
G
G
G
C
C
T
C
4450
G
G
A
G
C
C
T
C
A
T
C
C
G
A
G
G
C
A
G
G
G
T
C
A
G
G
A
G
A
G
G
G
G
C
A
G
A
A
C
A
G
C
C
G
C
T
C
C
T
G
4500 |
var(4481):[C:0.10]
T
C
T
G
C
C
A
G
C
C
A
G
C
A
G
C
C
A
G
C
T
C
T
C
A
G
C
C
A
A
C
G
A
G
T
A
A
T
T
T
A
T
T
G
T
T
T
T
T
C
4550
C
T
C
G
T
A
T
T
T
A
A
A
T
A
T
T
A
A
A
T
A
T
G
T
T
A
G
C
A
A
A
G
A
G
T
T
A
A
T
A
T
A
T
A
G
A
A
G
G
G
4600 |
var(4553):[T:0.18]
T
A
C
C
T
T
G
A
A
C
A
C
T
G
G
G
G
G
A
G
G
G
G
A
C
A
T
T
G
A
A
C
A
A
G
T
T
G
T
T
T
C
A
T
T
G
A
C
T
A
4650
T
C
A
A
A
C
T
G
A
A
G
C
C
A
G
A
A
A
T
A
A
A
G
T
T
G
G
T
G
A
C
A
G
A
T
A
GGCC TGATTGTATT
4700
TGTCTTTCAT TTTGGCCTTT GGGGACACTG GTCTGTGGTC TGAAGACTCT
4750
GAGGAGCTCT TCGGGAGGCT GGTGGGTTGG AGGAGGGGAC TGGGATGGAT
4800
TACAGCGAGG GTAGGGTGCA GTGACCTGGG CTGAATGCAA GCTAGCTCCC
4850
GAGGGTGGGG ACATGGCCTG AAGGAAGCCC CACCTTCTGT CTGCTGCACC
4900
AGCAAGGACG GAGAGGCTTG GGCCAGACTG TCAGGGTTCA AGGAGGGCAT
4950
CAGGAGCAGA CGGAGACCCA GGAAGTCTCA CAATCACATC TCCTGAGGAC
5000
TGGCCAGCTG TGTCTGGCAC CACCCACACA TCCATGTCTC CCTCACAACC
5050
CAGGAGGCC
G
A
T
G
A
G
A
A
C
T
G
T
G
A
G
G
C
T
C
A
G
A
A
A
G
C
G
T
G
G
G
C
G
G
T
T
T
G
C
C
T
5100 |
REPEAT
A
A
G
G
T
C
A
C
G
T
A
G
C
T
A
C
T
T
CC TCACTGGGGT CCTGGGGCCT CAGAGCCTCA
5150
TCTGAGGTA
A
A
G
G
A
G
C
A
A
A
G
T
T
G
G
G
A
T
T
G
G
G
G
T
C
C
A
A
A
A
T
T
C
A
C
T
T
T
A
A
C
5200 |
REPEAT
T
C
C
A
A
A
G
C
C
C
A
C
A
C
A
C
T
T
A
A
C
C
A
C
C
C
T
G
C
C
T
A
T
TTCTGTC CAAATGTCAC
5250
CTGTCCTGAA TGGAGTTTTT CC
C
C
C
T
G
T
A
C
A
A
C
T
G
T
C
A
T
C
A
A
C
C
T
G
T
T
C
G
5300 |
REPEAT
G
G
C
C
C
T
C
T
C
A
C
T
G
A
C
A
G
G
C
A
G
G
T
C
C
C
T
A
C
C
T
A
T
A
T
T
T
G
A
G
G
G
G
C
A
G
C
C
C
A
5350
T
T
G
C
A
T
T
T
C
T
G
G
A
C
A
G
C
T
C
T
C
G
C
C
A
T
T
A
G
G GTGCACACAC GCACCACCTC
5400
TGTGAACAGG GCTCTGGCTA GGCCACTCCT CAGCAGCTCT TGTTGCTTCC
5450
CCATGGCCCT GGTCAGCAGC TGGAGTGCAG AGACCAGCGG GCCTTACCAA
5500
GCCACAGCTC CAGGCCATGC CCGTCAGCAA CACTTTTCAC TGTGACTCTC
5550
TGGGAGGTGC CCAGGGCAGA GGGTGACTCC AGGATGGGAT G
C
CTTTGCAG
5600 |
var(5592):[T:0.01]
TGGGTGATGG TCTTCAAGAA CCAGTCTCAA ACTTGTAGTG ACAGGCAGGT
5650
GCCCTCCCTG GGGAGCCCAG AGCCCTATGG GAACACCACA GTGATGCTCA
5700
GAAGTCCCTG AAGGCAGCCG CCCTCGACTG CTCATGGCTG TGTCATTCAC
5750
GCAACAGCAG AGGACGTGGC AGGGAGTTCG CCAGGGGGCT GATGATGGTG
5800
GCCAGCTACT CCAGAACCAC TCACTTTCCC CAGGGAGAGG CGACGGAAGA
5850
AGGCAAACCT GACAGTGCAG GGGGCAGGGG ACACTTGGCC TAGAGGAGAG
5900
AAGACTGTGG GGGTGAAGAG GGTGATGGTG CAAGAGCTGG GTCTCCAGCA
5950
GGCTGTCCCG GGCAGGAGAC AGGACCGGCT CTCTGGTGCC AAGCCTATTA
6000
AGTCCTGCCA CGTTTGCTGA GGAAATACCT GCGGGGGACC ACCCCACAGC
6050
AGACACCTGG GCTAGTGACA ACCAAGACAC CACATGCACT CAAGATTTAG
6100
CCCCTGAAAG AACTCTGTAG AAACAACAGA GGGTCGGGTT GGGGGAGCTG
6150
TATGTCCTCC CTCGGGAGGG CCTCCCCTCT GGAGGTGAGC AGTGGCTGCT
6200
TCCGCAAAGG ACGAGAGAGT CTTGGAAGCC AGGGGAGGTG GGTGGGAGTC
6250
AG
G
GTCTCGG CATTCTTCTC CATCCAGAGC CTAGGGTTTA AGGCTG
G
AAG
6300 |
var(6253):[A:0.01]
|
var(6297):[A:0.06]
GATATTTACG GAGGGTAATG ACTTTGTAAA CAAGACCTAG
A
AATCTATCT
6350 |
var(6341):[G:0.01]
CCCAGTAGCA TCATCTTTGA CCCATGTCCT CTCTGCCCAG CCAAAGTATT
6400
GCCCTGCCTA TCCAGAAAGA TGGAAACCCT TCCAGTGAAA TTCCACGTGA
6450
CTCCCTCAAG AACAAAGACT GGAATTGAGG CTGATGTGGG GCAAGGTTCC
6500
TCGGGATCCT CCAAGGCCGT GCTCTGAGCC ACACATTCAG GACAGCCTGC
6550
GAGGCAGGTG CACAGTGCGG ATGGC
C
GT
C
C CGGGCCCCAC TAGGGGTCTG
6600 |
var(6576):[T:0.08]
|
var(6579):[A:0.01]
CAGCTCGCCA CTTCCTCAGC CACCGCCGAG CTCCTGTCCC TCACACCTTC
6650
CAGGCTGCTC CCCAGGAAGG GGGACCTGTG GTCACTGGCA GTGTGCCCTG
6700
GGCTGGAGAG GGCGTGGGGC TCTCCAGGGA TGAGTGACAC
C
TTACTGAGC
6750 |
var(6741):[T:0.01]
CACAGAACC
G
AGCTGCAGCT GGTGGCGACA GGGAAGGGGC CCTGTCAGGA
6800 |
var(6760):[A:0.09]
ATGAGAAAGG AAGACAGAAC AAGGTAGGTA AGTGTCAGCA CTGCGGTCAT
6850
AGCTGTTTTC CCTGGGGAGG GGGAAAGGGC CAGCCCTTCC GGCATTGGCC
6900
TGTTTCCCTG AGGGGGGGG