Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001476 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 001795 00000 ------------ A 0.77 0.83 0.80 T 0.23 0.17 0.20 0000 --- --- --- --- 001904 00063 5' UTR C 0.85 0.83 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 001913 00072 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0003 CCG CAG PRO(P) GLN(Q) 002360 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 002446 00000 ------------ C 0.78 0.53 0.65 T 0.23 0.47 0.35 0000 --- --- --- --- 002465 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 003286 00000 ------------ G 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 003416 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003417 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005515 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005555 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 005655 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005732 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 005775 00000 ------------ C 0.75 0.57 0.66 T 0.25 0.43 0.34 0000 --- --- --- --- 005776 00000 ------------ C 0.75 0.57 0.66 T 0.25 0.43 0.34 0000 --- --- --- --- 005777 00000 ------------ C 0.75 0.57 0.66 A 0.25 0.43 0.34 0000 --- --- --- --- 005788 00000 ------------ C 0.75 0.57 0.66 G 0.25 0.43 0.34 0000 --- --- --- --- 005926 00000 ------------ C 0.69 0.67 0.68 T 0.31 0.33 0.32 0000 --- --- --- --- 006189 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 006190 00000 ------------ T 0.83 0.59 0.71 C 0.17 0.41 0.29 0000 --- --- --- --- 006219 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006253 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006348 00000 ------------ C 0.87 0.80 0.84 T 0.13 0.20 0.16 0000 --- --- --- --- 006373 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 006479 00203 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0047 CCT TCT PRO(P) SER(S) 006601 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 006659 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006857 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007466 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 007575 00000 ------------ G 0.96 0.91 0.93 C 0.04 0.09 0.07 0000 --- --- --- --- 007875 00451 SYNON G 0.96 0.91 0.94 C 0.04 0.09 0.06 0129 GTG GTC VAL(V) VAL(V) 007918 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 007920 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008098 00000 ------------ T 1.00 0.82 0.91 G 0.00 0.18 0.09 0000 --- --- --- --- 008213 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008334 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008480 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 008700 00000 ------------ - 0.04 0.07 0.06 + 0.96 0.93 0.94 0000 --- --- --- --- 009704 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009917 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009929 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010424 00000 ------------ G 0.96 0.91 0.94 C 0.04 0.09 0.06 0000 --- --- --- --- 010800 00000 ------------ T 0.96 0.91 0.94 C 0.04 0.09 0.06 0000 --- --- --- --- 010858 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011131 00531 NON-SYN G 1.00 0.80 0.89 A 0.00 0.20 0.11 0156 CGT CAT ARG(R) HIS(H) 011542 00000 ------------ C 0.95 0.91 0.93 T 0.05 0.09 0.07 0000 --- --- --- --- 011640 00000 ------------ C 0.92 0.74 0.82 T 0.08 0.26 0.17 0000 --- --- --- --- 011739 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011921 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 011977 00000 ------------ C 0.90 0.71 0.81 T 0.10 0.29 0.19 0000 --- --- --- --- 012190 00000 ------------ C 0.80 0.98 0.89 T 0.20 0.02 0.11 0000 --- --- --- --- 012502 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012536 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012606 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012633 00000 ------------ C 0.96 0.73 0.85 T 0.04 0.27 0.15 0000 --- --- --- --- 012638 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012705 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012715 00000 ------------ - 0.96 0.91 0.93 + 0.04 0.09 0.07 0000 --- --- --- --- 012773 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 012788 00000 ------------ A 0.90 0.74 0.82 G 0.10 0.26 0.18 0000 --- --- --- --- 012922 00705 NON-SYN A 0.90 0.70 0.80 G 0.10 0.30 0.20 0214 CAG CGG GLN(Q) ARG(R) 012965 00748 SYNON C 0.89 0.70 0.80 T 0.11 0.30 0.20 0228 CCC CCT PRO(P) PRO(P) 013003 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 013046 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013171 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013173 00000 ------------ T 0.90 0.74 0.82 C 0.10 0.26 0.18 0000 --- --- --- --- 013178 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013729 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 013762 00000 ------------ G 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 013852 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013887 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013957 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 013958 00000 ------------ G 0.87 0.89 0.88 T 0.13 0.11 0.12 0000 --- --- --- --- 014089 00000 ------------ A 0.83 0.69 0.77 T 0.17 0.31 0.23 0000 --- --- --- --- 014115 00000 ------------ A 0.88 0.69 0.79 G 0.12 0.31 0.21 0000 --- --- --- --- 014893 00000 ------------ G 0.75 0.70 0.72 A 0.25 0.30 0.28 0000 --- --- --- --- 014911 00000 ------------ A 0.88 0.91 0.89 G 0.12 0.09 0.11 0000 --- --- --- --- 015165 00799 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0245 GTG GTA VAL(V) VAL(V) 015623 00000 ------------ G 0.86 0.93 0.90 A 0.14 0.07 0.10 0000 --- --- --- --- 015640 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015722 00000 ------------ T 0.88 0.91 0.89 C 0.12 0.09 0.11 0000 --- --- --- --- 015762 00000 ------------ T 1.00 0.78 0.89 C 0.00 0.22 0.11 0000 --- --- --- --- 015763 00000 ------------ C 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 015764 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 015805 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 016001 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 016011 00000 ------------ C 0.85 0.70 0.78 T 0.15 0.30 0.22 0000 --- --- --- --- 016050 00000 ------------ C 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 016614 01081 NON-SYN C 0.98 1.00 0.99 G 0.02 0.00 0.01 0339 CAC CAG HIS(H) GLN(Q) 016642 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016788 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017100 00000 ------------ - 0.75 0.70 0.72 + 0.25 0.30 0.28 0000 --- --- --- --- 017278 00000 ------------ C 0.69 0.65 0.67 T 0.31 0.35 0.33 0000 --- --- --- --- 017362 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017431 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 017594 00000 ------------ T 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 017689 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 017765 00000 ------------ C 0.96 0.78 0.87 T 0.04 0.22 0.13 0000 --- --- --- --- 017975 00000 ------------ C 0.58 0.63 0.61 T 0.42 0.37 0.39 0000 --- --- --- --- 017993 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018266 00000 ------------ G 0.82 0.70 0.76 A 0.17 0.30 0.24 0000 --- --- --- --- 018534 00000 ------------ T 0.86 0.70 0.77 C 0.14 0.30 0.23 0000 --- --- --- --- 018898 00000 ------------ C 0.84 0.68 0.76 T 0.16 0.32 0.24 0000 --- --- --- --- 019093 01158 NON-SYN T 0.77 0.70 0.73 C 0.23 0.30 0.27 0365 ATG ACG MET(M) THR(T) 019131 01196 NON-SYN G 0.85 0.70 0.78 C 0.15 0.30 0.22 0378 GGG CGG GLY(G) ARG(R) 019148 01213 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0383 TGC TGT CYS(C) CYS(C) 019279 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 019291 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 019308 00000 ------------ T 1.00 0.78 0.89 C 0.00 0.22 0.11 0000 --- --- --- --- 019350 00000 ------------ C 1.00 0.77 0.89 T 0.00 0.23 0.11 0000 --- --- --- --- 019366 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019472 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019493 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019494 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019571 00000 ------------ C 1.00 0.77 0.89 T 0.00 0.23 0.11 0000 --- --- --- --- 019626 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 019710 00000 ------------ - 0.00 0.17 0.07 + 1.00 0.83 0.93 0000 --- --- --- --- 019842 00000 ------------ C 0.98 0.78 0.88 T 0.02 0.22 0.12 0000 --- --- --- --- 019872 00000 ------------ A 0.90 0.78 0.84 G 0.10 0.22 0.16 0000 --- --- --- --- 019914 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 020429 00000 ------------ G 0.65 0.98 0.81 A 0.35 0.02 0.19 0000 --- --- --- --- 020581 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020928 00000 ------------ T 0.52 0.70 0.61 G 0.48 0.30 0.39 0000 --- --- --- --- 020929 00000 ------------ A 0.67 0.98 0.83 C 0.33 0.02 0.17 0000 --- --- --- --- 021284 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 021379 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 021795 00000 ------------ T 0.98 0.92 0.95 G 0.02 0.08 0.05 0000 --- --- --- --- 021971 00000 ------------ C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 022362 00000 ------------ C 0.72 0.97 0.85 T 0.28 0.03 0.15 0000 --- --- --- --- 022958 00000 ------------ C 1.00 0.97 0.98 T 0.00 0.03 0.02 0000 --- --- --- --- 023187 00000 ------------ C 1.00 0.59 0.79 T 0.00 0.41 0.21 0000 --- --- --- --- 023406 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023458 00000 ------------ C 0.71 0.66 0.68 T 0.29 0.34 0.32 0000 --- --- --- --- 023691 00000 ------------ T 0.80 0.98 0.89 C 0.20 0.02 0.11 0000 --- --- --- --- 024057 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024415 00000 ------------ C 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 024596 00000 ------------ G 0.93 0.52 0.73 A 0.07 0.48 0.27 0000 --- --- --- --- 024625 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024626 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024991 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 025126 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 025167 00000 ------------ T 1.00 0.65 0.83 C 0.00 0.35 0.17 0000 --- --- --- --- 025200 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 025621 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025941 00000 ------------ A 0.52 0.53 0.52 G 0.48 0.47 0.48 0000 --- --- --- --- 025947 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 025987 00000 ------------ C 0.93 0.97 0.95 T 0.07 0.03 0.05 0000 --- --- --- --- 026003 00000 ------------ - 0.04 0.42 0.20 + 0.96 0.58 0.80 0000 --- --- --- --- 026032 00000 ------------ G 0.94 0.94 0.94 A 0.06 0.06 0.06 0000 --- --- --- --- 026073 00000 ------------ G 0.92 0.86 0.89 A 0.08 0.14 0.11 0000 --- --- --- --- 026190 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026704 00000 ------------ T 1.00 0.61 0.80 C 0.00 0.39 0.20 0000 --- --- --- --- 026980 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027016 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027294 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027541 01783 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0573 GCC GCT ALA(A) ALA(A) 027659 00000 ------------ C 0.52 0.52 0.52 T 0.48 0.48 0.48 0000 --- --- --- --- 027694 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 027862 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 027967 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 028150 00000 ------------ G 0.92 0.93 0.92 A 0.08 0.07 0.08 0000 --- --- --- --- 028192 00000 ------------ C 0.65 0.98 0.82 T 0.35 0.02 0.18 0000 --- --- --- --- 028371 00000 ------------ T 1.00 0.88 0.94 C 0.00 0.12 0.06 0000 --- --- --- --- 028583 00000 ------------ G 0.88 0.61 0.74 A 0.12 0.39 0.26 0000 --- --- --- --- 028608 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028865 00000 ------------ C 0.90 0.63 0.78 T 0.10 0.37 0.23 0000 --- --- --- --- 028888 00000 ------------ G 0.98 0.63 0.81 T 0.02 0.37 0.19 0000 --- --- --- --- 029161 02087 3' UTR C 0.86 0.62 0.75 T 0.14 0.38 0.25 0000 --- --- --- --- 029280 00000 ------------ - 0.36 0.47 0.41 + 0.64 0.53 0.59 0000 --- --- --- --- 029549 00000 ------------ A 0.65 0.47 0.56 T 0.35 0.53 0.44 0000 --- --- --- --- 029566 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029765 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 030101 00000 ------------ G 0.92 0.88 0.90 C 0.08 0.12 0.10 0000 --- --- --- --- 030105 00000 ------------ - 0.65 0.34 0.50 + 0.35 0.66 0.50 0000 --- --- --- --- 030106 00000 ------------ G 0.40 0.67 0.52 C 0.60 0.33 0.48 0000 --- --- --- --- 030236 00000 ------------ C 0.58 0.43 0.51 A 0.42 0.57 0.49 0000 --- --- --- --- 030284 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 030305 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006219: A 008700: A 012715: A 017100: TTTG 019710: TA 025947: C 026003: TGATGCGATCTCGGCTCACTGCAA 029280: G 029765: ATTC 030105: G