Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000987 AA 0 0 0 AT 0 3 3 TT 19 19 38 0.000 0.118 0.059 001211 AA 0 0 0 AG 0 1 1 GG 19 21 40 0.000 0.012 0.006 001313 CC 19 21 40 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 001433 AA 12 9 21 AG 4 11 15 GG 2 2 4 2.296 0.279 0.287 001526 CC 0 0 0 CT 1 0 1 TT 17 22 39 0.015 0.000 0.006 001863 GG 1 0 1 GT 2 0 2 TT 21 22 43 4.959 0.000 10.478 001875 AA 0 0 0 AC 0 1 1 CC 24 21 45 0.000 0.012 0.006 001972 CC 23 15 38 CT 1 7 8 TT 0 0 0 0.011 0.787 0.417 001988 CC 3 6 9 CT 13 12 25 TT 8 4 12 0.421 0.220 0.386 002085 AA 0 0 0 AG 0 1 1 GG 24 21 45 0.000 0.012 0.006 002138 CC 2 6 8 CT 12 12 24 TT 9 4 13 0.517 0.220 0.288 002173 AA 0 1 1 AG 1 8 9 GG 22 13 35 0.011 0.027 0.207 002330 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 002698 CC 15 11 26 CT 6 10 16 TT 1 2 3 0.153 0.017 0.063 002782 -- 18 22 40 +- 4 0 4 ++ 0 0 0 0.220 0.000 0.100 002845 CC 0 0 0 CT 1 0 1 TT 21 23 44 0.012 0.000 0.006 003004 CC 0 1 1 CG 5 9 14 GG 17 13 30 0.362 0.130 0.185 003077 -- 0 1 1 +- 4 9 13 ++ 20 13 33 0.198 0.130 0.046 003238 AA 16 22 38 AG 3 0 3 GG 0 0 0 0.140 0.000 0.059 003396 AA 0 0 0 AG 1 0 1 GG 17 23 40 0.015 0.000 0.006 003611 AA 0 0 0 AG 1 0 1 GG 17 22 39 0.015 0.000 0.006 003641 AA 17 22 39 AG 1 0 1 GG 0 0 0 0.015 0.000 0.006 005459 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 005926 AA 22 22 44 AG 0 1 1 GG 0 0 0 0.000 0.011 0.006 006054 CC 20 12 32 CT 2 9 11 TT 0 2 2 0.050 0.028 0.648 006979 CC 19 23 42 CT 1 0 1 TT 0 0 0 0.013 0.000 0.006 007231 CC 0 0 0 CG 4 0 4 GG 16 23 39 0.247 0.000 0.102 007679 AA 0 0 0 AG 0 1 1 GG 23 22 45 0.000 0.011 0.006 008338 -- 0 0 0 +- 0 1 1 ++ 23 22 45 0.000 0.011 0.006 008489 AA 21 20 41 AG 0 3 3 GG 0 0 0 0.000 0.112 0.055 008506 AA 19 22 41 AG 0 1 1 GG 0 0 0 0.000 0.011 0.006 009303 CC 19 11 30 CT 2 8 10 TT 0 1 1 0.053 0.089 0.023 009308 AA 0 0 0 AG 0 1 1 GG 20 19 39 0.000 0.013 0.006 009313 AA 15 20 35 AG 3 0 3 GG 0 0 0 0.149 0.000 0.064 009663 CC 0 0 0 CG 5 0 5 GG 18 23 41 0.342 0.000 0.152 009758 CC 19 13 32 CT 4 9 13 TT 0 1 1 0.209 0.130 0.058 010643 AA 23 22 45 AG 0 1 1 GG 0 0 0 0.000 0.011 0.006 011317 AA 20 13 33 AG 4 9 13 GG 0 1 1 0.198 0.130 0.046 011447 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 011478 AA 0 1 1 AG 5 9 14 GG 18 13 31 0.342 0.130 0.161 011497 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 011792 CC 20 23 43 CT 2 0 2 TT 0 0 0 0.050 0.000 0.023 011951 AA 21 23 44 AG 1 0 1 GG 0 0 0 0.012 0.000 0.006 012582 AA 0 1 1 AG 4 9 13 GG 17 13 30 0.233 0.130 0.088 012737 AA 5 4 9 AG 11 13 24 GG 1 6 7 2.327 0.445 1.648 012911 AA 20 23 43 AT 1 0 1 TT 0 0 0 0.012 0.000 0.006 012934 CC 21 22 43 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 013250 AA 21 22 43 AG 0 1 1 GG 0 0 0 0.000 0.011 0.006 013786 CC 21 23 44 CT 2 0 2 TT 0 0 0 0.048 0.000 0.023 013946 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 014390 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 014424 GG 0 0 0 GT 1 0 1 TT 23 23 46 0.011 0.000 0.005 015720 CC 22 22 44 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 017375 AA 0 0 0 AG 1 0 1 GG 17 21 38 0.015 0.000 0.007 018976 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 019162 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 019558 GG 22 23 45 GT 1 0 1 TT 0 0 0 0.011 0.000 0.006 020048 CC 21 23 44 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 020851 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 022729 AA 19 16 35 AG 2 7 9 GG 0 0 0 0.053 0.741 0.571 022875 AA 21 23 44 AC 1 0 1 CC 0 0 0 0.012 0.000 0.006 022921 GG 0 2 2 GT 1 9 10 TT 21 12 33 0.012 0.028 1.069 023271 CC 0 0 0 CT 1 0 1 TT 18 23 41 0.014 0.000 0.006 023382 AA 0 0 0 AG 0 2 2 GG 19 20 39 0.000 0.050 0.026 023840 -- 0 0 0 +- 2 0 2 ++ 17 22 39 0.059 0.000 0.026 024025 CC 21 23 44 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 024334 CC 0 0 0 CG 0 1 1 GG 22 22 44 0.000 0.011 0.006 024621 AA 1 2 3 AC 7 9 16 CC 14 11 25 0.011 0.007 0.040 024707 CC 20 23 43 CT 2 0 2 TT 0 0 0 0.050 0.000 0.023 025018 AA 0 1 1 AT 5 9 14 TT 17 13 30 0.362 0.130 0.185 025400 -- 0 0 0 +- 1 0 1 ++ 21 23 44 0.012 0.000 0.006 025418 CC 20 23 43 CT 2 0 2 TT 0 0 0 0.050 0.000 0.023 025670 CC 0 0 0 CT 2 0 2 TT 22 23 45 0.045 0.000 0.022 025919 AA 3 3 6 AG 8 10 18 GG 12 8 20 0.733 0.002 0.354 025920 AA 3 3 6 AC 8 10 18 CC 11 8 19 0.577 0.002 0.265 025947 CC 23 18 41 CG 0 1 1 GG 0 2 2 0.000 12.547 27.318 027276 AA 9 11 20 AG 10 6 16 GG 1 4 5 0.726 2.679 0.401 027550 AA 17 20 37 AG 4 0 4 GG 1 0 1 1.144 0.000 3.341 027586 AA 0 0 0 AG 1 0 1 GG 20 19 39 0.012 0.000 0.006 027719 AA 12 7 19 AG 5 6 11 GG 1 4 5 0.231 1.252 2.217 028759 AA 18 22 40 AG 1 0 1 GG 0 0 0 0.014 0.000 0.006 028765 GG 0 4 4 GT 7 10 17 TT 12 8 20 0.969 0.079 0.019 028811 -- 18 22 40 +- 1 0 1 ++ 0 0 0 0.014 0.000 0.006 029083 CC 0 0 0 CT 1 0 1 TT 16 22 38 0.016 0.000 0.007 029182 AA 19 23 42 AG 1 0 1 GG 0 0 0 0.013 0.000 0.006 029409 GG 0 0 0 GT 1 0 1 TT 19 22 41 0.013 0.000 0.006 029624 AA 20 21 41 AG 0 1 1 GG 0 0 0 0.000 0.012 0.006 029665 CC 19 22 41 CT 1 0 1 TT 0 0 0 0.013 0.000 0.006 029791 AA 15 7 22 AG 4 10 14 GG 1 5 6 0.930 0.153 2.036 029857 AA 1 0 1 AG 1 0 1 GG 18 22 40 8.183 0.000 17.982 029863 CC 1 5 6 CT 11 10 21 TT 8 7 15 1.286 0.153 0.097 030233 AA 0 0 0 AG 0 2 2 GG 22 21 43 0.000 0.048 0.023 030361 AA 0 0 0 AG 3 1 4 GG 19 22 41 0.118 0.011 0.097 030577 AA 0 0 0 AG 1 0 1 GG 21 23 44 0.012 0.000 0.006 030675 CC 21 23 44 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 030712 AA 21 23 44 AG 1 0 1 GG 0 0 0 0.012 0.000 0.006 030999 CC 1 0 1 CG 6 0 6 GG 13 22 35 0.078 0.000 1.229 031117 AA 1 0 1 AC 6 0 6 CC 14 22 36 0.114 0.000 1.288 031617 AA 5 9 14 AG 8 6 14 GG 6 5 11 0.460 2.812 3.009 031785 AA 0 2 2 AC 5 7 12 CC 18 12 30 0.342 0.399 0.306 031786 -- 0 2 2 +- 5 7 12 ++ 18 12 30 0.342 0.399 0.306 031866 AA 24 20 44 AG 0 2 2 GG 0 0 0 0.000 0.050 0.023 031914 CC 0 0 0 CG 0 1 1 GG 24 21 45 0.000 0.012 0.006 031978 GG 24 20 44 GT 0 1 1 TT 0 1 1 0.000 9.075 19.761 032050 CC 1 1 2 CT 8 5 13 TT 14 16 30 0.011 0.499 0.147 032509 AA 19 23 42 AG 1 0 1 GG 1 0 1 8.629 0.000 18.871 033218 AA 4 10 14 AC 9 6 15 CC 9 6 15 0.414 4.180 4.445 033285 CC 20 22 42 CT 2 0 2 TT 0 0 0 0.050 0.000 0.024 033435 AA 4 9 13 AT 8 6 14 TT 9 7 16 0.777 4.455 5.137 033485 AA 4 9 13 AG 8 6 14 GG 10 7 17 1.010 4.455 5.650 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 002782: G 003077: ttttc 008338: aaa 023840: t 025400: t 028811: A 031786: t