Site      Genotype1 AD-pop    ED-pop    Total-pop Genotype2 AD-pop    ED-pop    Total-pop Genotype3 AD-pop    ED-pop    Total-pop AD-chi2   ED-chi2   Total-chi2
000078    CC        3         5         8         CT        11        10        21        TT        10        8         18        0.000     0.306     0.193     
000132    CC        24        22        46        CT        0         1         1         TT        0         0         0         0.000     0.011     0.005     
000628    CC        0         1         1         CT        0         3         3         TT        22        13        35        0.000     1.495     5.024     
000773    CC        22        23        45        CT        2         0         2         TT        0         0         0         0.045     0.000     0.022     
000801    CC        23        19        42        CG        1         4         5         GG        0         0         0         0.011     0.209     0.148     
000950    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
001386    GG        19        22        41        GT        2         0         2         TT        0         0         0         0.053     0.000     0.024     
001414    AA        23        23        46        AG        1         0         1         GG        0         0         0         0.011     0.000     0.005     
001879    GG        0         0         0         GT        1         0         1         TT        23        23        46        0.011     0.000     0.005     
001899    CC        0         0         0         CT        1         0         1         TT        23        23        46        0.011     0.000     0.005     
002611    AA        20        21        41        AG        2         0         2         GG        0         0         0         0.050     0.000     0.024     
003677    AA        16        9         25        AG        6         9         15        GG        0         4         4         0.548     0.414     0.603     
003890    CC        0         4         4         CT        4         10        14        TT        20        9         29        0.198     0.175     1.345     
004042    AA        0         0         0         AC        3         0         3         CC        21        23        44        0.107     0.000     0.051     
004100    CC        0         0         0         CT        2         0         2         TT        22        23        45        0.045     0.000     0.022     
004271    AA        22        23        45        AG        2         0         2         GG        0         0         0         0.045     0.000     0.022     
004505    AA        0         0         0         AT        2         0         2         TT        21        23        44        0.048     0.000     0.023     
004854    --        0         2         2         +-        0         12        12        ++        24        9         33        0.000     0.517     0.435     
004925    CC        7         10        17        CT        8         5         13        TT        8         4         12        2.112     3.278     5.814     
005301    AA        0         0         0         AG        2         0         2         GG        22        23        45        0.045     0.000     0.022     
005377    AA        0         0         0         AG        2         0         2         GG        21        23        44        0.048     0.000     0.023     
006050    AA        21        23        44        AG        1         0         1         GG        0         0         0         0.012     0.000     0.006     
006077    AA        0         0         0         AT        0         1         1         TT        23        22        45        0.000     0.011     0.006     
006134    CC        22        23        45        CT        1         0         1         TT        0         0         0         0.011     0.000     0.006     
006493    AA        20        23        43        AG        2         0         2         GG        0         0         0         0.050     0.000     0.023     
006572    CC        20        23        43        CT        2         0         2         TT        0         0         0         0.050     0.000     0.023     
006701    AA        0         0         0         AG        3         0         3         GG        21        23        44        0.107     0.000     0.051     
006855    CC        0         0         0         CT        2         0         2         TT        22        21        43        0.045     0.000     0.023     
006864    AA        13        7         20        AG        10        11        21        GG        1         3         4         0.296     0.159     0.211     
007002    CC        0         0         0         CT        0         1         1         TT        24        20        44        0.000     0.012     0.006     
007021    AA        24        20        44        AT        0         1         1         TT        0         0         0         0.000     0.012     0.006     
007303    AA        3         0         3         AG        5         0         5         GG        15        23        38        3.728     0.000     10.764    
007317    AA        0         0         0         AG        0         1         1         GG        24        22        46        0.000     0.011     0.005     
007475    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
007585    AA        0         0         0         AG        2         0         2         GG        21        23        44        0.048     0.000     0.023     

Note:

AD: African_Descent
ED: European_Descent
Total: All_population
pop : population

Diallelic insertion/deletion polymorphisms are represented as:

+ : insertion allele
- : deletion allele

The + (inserted) allele for each site is listed below:

004854: G