Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001601 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001653 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001669 00000 ------------ G 0.50 0.50 0.50 T 0.50 0.50 0.50 0000 --- --- --- --- 001684 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 001715 00014 5' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001728 00027 5' UTR C 0.71 0.69 0.70 A 0.29 0.31 0.30 0000 --- --- --- --- 001744 00043 5' UTR C 0.98 0.97 0.97 T 0.02 0.03 0.03 0000 --- --- --- --- 001851 00150 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002217 00000 ------------ G 0.90 0.85 0.88 T 0.10 0.15 0.12 0000 --- --- --- --- 002251 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002357 00000 ------------ T 0.69 0.55 0.62 C 0.31 0.45 0.38 0000 --- --- --- --- 002961 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003264 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003303 00000 ------------ A 0.71 0.81 0.76 C 0.29 0.19 0.24 0000 --- --- --- --- 003361 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 003373 00000 ------------ T 0.95 0.97 0.96 G 0.05 0.03 0.04 0000 --- --- --- --- 004134 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004160 00000 ------------ T 0.98 0.82 0.90 C 0.02 0.18 0.10 0000 --- --- --- --- 004270 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004707 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004954 00000 ------------ A 0.79 0.86 0.83 G 0.21 0.14 0.17 0000 --- --- --- --- 005067 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005077 00000 ------------ - 0.04 0.07 0.05 + 0.96 0.93 0.95 0000 --- --- --- --- 005114 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005201 00000 ------------ C 0.79 0.68 0.74 T 0.21 0.32 0.26 0000 --- --- --- --- 005202 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006057 00000 ------------ A 0.83 0.72 0.78 C 0.17 0.28 0.22 0000 --- --- --- --- 006213 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 006646 00000 ------------ G 0.75 0.81 0.78 A 0.25 0.19 0.22 0000 --- --- --- --- 006707 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006781 00000 ------------ G 0.85 0.79 0.82 A 0.15 0.21 0.18 0000 --- --- --- --- 006804 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 006859 00000 ------------ G 0.75 0.62 0.69 A 0.25 0.38 0.31 0000 --- --- --- --- 006926 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007110 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007293 00000 ------------ C 0.82 0.66 0.74 G 0.18 0.34 0.26 0000 --- --- --- --- 007527 00000 ------------ G 0.89 0.76 0.83 A 0.11 0.24 0.17 0000 --- --- --- --- 008048 00000 ------------ T 0.86 0.80 0.83 A 0.14 0.20 0.17 0000 --- --- --- --- 008103 00000 ------------ T 0.79 0.80 0.79 C 0.21 0.20 0.21 0000 --- --- --- --- 008255 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 008377 00000 ------------ G 0.85 0.81 0.83 C 0.15 0.19 0.17 0000 --- --- --- --- 008425 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008604 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008807 00000 ------------ G 0.79 0.82 0.80 A 0.21 0.17 0.20 0000 --- --- --- --- 008810 00000 ------------ T 0.76 0.62 0.70 G 0.24 0.38 0.30 0000 --- --- --- --- 008928 00000 ------------ G 0.70 0.62 0.65 A 0.30 0.38 0.35 0000 --- --- --- --- 009367 00000 ------------ A 0.72 0.64 0.68 G 0.28 0.36 0.32 0000 --- --- --- --- 009438 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009910 00000 ------------ C 0.50 0.55 0.52 T 0.50 0.45 0.48 0000 --- --- --- --- 010071 00000 ------------ - 0.11 0.21 0.16 + 0.89 0.79 0.84 0000 --- --- --- --- 010316 00000 ------------ T 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 010417 00000 ------------ - 0.80 0.75 0.78 + 0.20 0.25 0.22 0000 --- --- --- --- 010621 00000 ------------ A 0.79 0.76 0.78 G 0.21 0.24 0.22 0000 --- --- --- --- 010742 00000 ------------ C 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 010744 00000 ------------ G 0.98 0.80 0.89 T 0.02 0.20 0.11 0000 --- --- --- --- 010901 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 010969 00000 ------------ T 0.77 0.62 0.70 C 0.23 0.38 0.30 0000 --- --- --- --- 010995 00000 ------------ C 0.75 0.65 0.70 G 0.25 0.35 0.30 0000 --- --- --- --- 011019 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011132 00000 ------------ A 0.79 0.76 0.78 G 0.21 0.24 0.22 0000 --- --- --- --- 011154 00000 ------------ C 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 011416 00000 ------------ A 0.53 0.50 0.51 G 0.47 0.50 0.49 0000 --- --- --- --- 012571 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 012645 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012677 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 012726 00000 ------------ A 0.76 0.65 0.70 G 0.24 0.35 0.30 0000 --- --- --- --- 012776 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012877 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012971 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 013300 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 013370 00000 ------------ - 0.28 0.31 0.30 + 0.72 0.69 0.70 0000 --- --- --- --- 013392 00000 ------------ C 0.78 0.83 0.81 A 0.22 0.17 0.19 0000 --- --- --- --- 013675 00349 NON-SYN T 0.91 0.88 0.90 C 0.09 0.12 0.10 0008 TTC TCC PHE(F) SER(S) 013680 00354 NON-SYN T 0.74 0.67 0.70 G 0.26 0.33 0.30 0010 TTC GTC PHE(F) VAL(V) 014210 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014259 00000 ------------ A 0.72 0.65 0.69 G 0.28 0.35 0.31 0000 --- --- --- --- 014665 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015157 00000 ------------ G 0.83 0.87 0.85 A 0.17 0.13 0.15 0000 --- --- --- --- 015582 00000 ------------ T 0.80 0.76 0.78 C 0.20 0.24 0.22 0000 --- --- --- --- 015970 00000 ------------ G 0.79 0.67 0.73 A 0.21 0.33 0.27 0000 --- --- --- --- 015974 00000 ------------ A 0.79 0.86 0.82 T 0.21 0.14 0.18 0000 --- --- --- --- 016282 00000 ------------ G 0.80 0.74 0.77 C 0.20 0.26 0.23 0000 --- --- --- --- 016348 00000 ------------ A 0.74 0.71 0.73 C 0.26 0.29 0.27 0000 --- --- --- --- 016499 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016638 00000 ------------ C 0.74 0.71 0.73 T 0.26 0.29 0.27 0000 --- --- --- --- 016672 00000 ------------ - 0.02 0.05 0.03 + 0.98 0.95 0.97 0000 --- --- --- --- 017375 00000 ------------ T 0.71 0.69 0.70 A 0.29 0.31 0.30 0000 --- --- --- --- 017414 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017451 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017454 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017468 00000 ------------ T 0.73 0.67 0.70 A 0.27 0.33 0.30 0000 --- --- --- --- 017514 00000 ------------ C 0.85 0.83 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 017536 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 017585 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017710 00000 ------------ A 0.56 0.52 0.54 G 0.44 0.48 0.46 0000 --- --- --- --- 017738 00000 ------------ G 0.73 0.66 0.70 A 0.27 0.34 0.30 0000 --- --- --- --- 017824 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017864 00000 ------------ G 0.73 0.67 0.70 A 0.27 0.33 0.30 0000 --- --- --- --- 017990 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018079 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018122 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 018870 00000 ------------ G 0.72 0.65 0.68 A 0.28 0.35 0.32 0000 --- --- --- --- 018980 00000 ------------ C 0.50 0.55 0.52 T 0.50 0.45 0.48 0000 --- --- --- --- 018984 00000 ------------ C 0.50 0.55 0.52 T 0.50 0.45 0.48 0000 --- --- --- --- 019347 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 019538 00000 ------------ T 0.91 0.82 0.87 C 0.09 0.18 0.13 0000 --- --- --- --- 019632 00000 ------------ T 0.70 0.68 0.69 C 0.30 0.32 0.31 0000 --- --- --- --- 019745 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 019811 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019834 00000 ------------ A 0.89 0.82 0.86 C 0.11 0.18 0.14 0000 --- --- --- --- 019876 00000 ------------ A 0.70 0.68 0.69 G 0.30 0.32 0.31 0000 --- --- --- --- 020093 00000 ------------ A 0.88 0.82 0.85 G 0.12 0.18 0.15 0000 --- --- --- --- 020186 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020226 00000 ------------ A 0.95 0.86 0.91 G 0.05 0.14 0.09 0000 --- --- --- --- 020350 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020671 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020980 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021373 00000 ------------ C 0.59 0.57 0.58 A 0.41 0.43 0.42 0000 --- --- --- --- 021424 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 021961 00000 ------------ G 0.56 0.48 0.52 A 0.44 0.52 0.48 0000 --- --- --- --- 023276 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023344 00000 ------------ A 0.95 0.88 0.92 G 0.05 0.12 0.08 0000 --- --- --- --- 024241 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 024342 00000 ------------ G 0.74 0.70 0.72 A 0.26 0.30 0.28 0000 --- --- --- --- 024437 00912 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0196 ATC GTC ILE(I) VAL(V) 024838 00000 ------------ G 0.72 0.65 0.68 A 0.28 0.35 0.32 0000 --- --- --- --- 024988 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 025015* 025423 00000 ------------ G 0.60 0.50 0.55 T 0.40 0.50 0.45 0000 --- --- --- --- 026079 00000 ------------ C 0.75 0.77 0.76 A 0.25 0.23 0.24 0000 --- --- --- --- 026237 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026279 00000 ------------ T 0.71 0.65 0.68 C 0.29 0.35 0.32 0000 --- --- --- --- 026280 00000 ------------ G 0.71 0.67 0.69 A 0.29 0.33 0.31 0000 --- --- --- --- 026394 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 026452 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027199 00000 ------------ G 0.59 0.65 0.62 C 0.41 0.35 0.38 0000 --- --- --- --- 027204 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 027459 00000 ------------ C 1.00 0.88 0.94 G 0.00 0.12 0.06 0000 --- --- --- --- 028600 00000 ------------ A 0.61 0.65 0.63 G 0.39 0.35 0.37 0000 --- --- --- --- 028759 00000 ------------ G 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 029277 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 029800 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 029854 00000 ------------ G 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 029907 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 030183 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 030380 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030558 00000 ------------ A 0.52 0.68 0.60 G 0.48 0.32 0.40 0000 --- --- --- --- 030988 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031224 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 031666 00000 ------------ C 0.74 0.72 0.73 T 0.26 0.28 0.27 0000 --- --- --- --- 034480 01356 3' UTR - 0.67 0.66 0.66 + 0.33 0.34 0.34 0000 --- --- --- --- 035359 02235 3' UTR T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 035625 02501 3' UTR G 1.00 0.88 0.94 A 0.00 0.12 0.06 0000 --- --- --- --- 036411 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 036413 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 037068 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001653: CGCCCGC 005077: A 006804: TG 008255: C 010071: AT 010417: T 012571: T 013370: T 016672: TCT 023276: T 024241: ACTT 026394: TTAA 029277: ATTTTACAGAGCGCTGATTGGTGCGTTTTAGAGTGCTGATTGGTGC 034480: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 025015 A 0.85 0.82 0.83 C 0.11 0.18 0.14 T 0.04 0.00 0.02