LOCUS DQ011692 3448 bp DNA linear PRI 27-APR-2005 DEFINITION Homo sapiens intercellular adhesion molecule 4, Landsteiner-Wiener blood group (ICAM4) gene, complete cds. ACCESSION DQ011692 VERSION DQ011692.1 GI:62865490 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3448) AUTHORS Rieder,M.J., Johanson,E.J., da Ponte,S.H., Hastings,N.C., Ahearn,M.O., Bertucci,C.B., Wong,M.W., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (19-APR-2005) Genome Sciences, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA COMMENT To cite this work please use: SeattleSNPs. NHLBI HL66682 Program for Genomic Applications, UW-FHCRC, Seattle, WA (URL: http://pga.gs.washington.edu). FEATURES Location/Qualifiers source 1..3448 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" variation 174 /frequency="0.19" /replace="t" variation 392 /frequency="0.01" /replace="c" gene <451..1969 /gene="ICAM4" mRNA join(<451..853,983..1285,1433..1969) /gene="ICAM4" /product="intercellular adhesion molecule 4, Landsteiner-Wiener blood group" CDS join(460..853,983..1285,1433..1551) /gene="ICAM4" /codon_start=1 /product="intercellular adhesion molecule 4, Landsteiner-Wiener blood group" /protein_id="AAY16986.1" /db_xref="GI:62865491" /translation="MGSLFPLSLLFFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGT SVPFWVRMSPEFVAVQPGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLL DVRAWSSLAHCLVTCAGKTRWATSRITAYKPPHSVILEPPVLKGRKYTLRCHVTQVFP VGYLVVTLRHGSRVIYSESLERFTGLDLANVTLTYEFAAGPRDFWQPVICHARLNLDG LVVRNSSAPITLMLAWSPAPTALASGSIAALVGILLTVGAAYLCKCLAMKSQA" variation 860 /gene="ICAM4" /frequency="0.01" /replace="a" variation 902 /gene="ICAM4" /frequency="0.01" /replace="c" variation 977 /gene="ICAM4" /frequency="0.01" /replace="t" variation 1210 /gene="ICAM4" /frequency="0.01" /replace="c" repeat_region 1613..1921 /rpt_family="Alu" /rpt_type=dispersed variation 2146 /frequency="0.37" /replace="g" variation 2190 /frequency="0.01" /replace="g" variation 2295 /frequency="0.02" /replace="c" variation 2322 /frequency="0.04" /replace="g" variation 2406 /frequency="0.01" /replace="t" variation 2433 /frequency="0.01" /replace="a" variation 2474 /frequency="0.01" /replace="g" variation 2556 /frequency="0.01" /replace="c" variation 2675 /frequency="0.18" /replace="t" variation 2796 /frequency="0.02" /replace="c" variation 2881 /frequency="0.33" /replace="g" variation 3075 /frequency="0.29" /replace="g" variation 3153 /frequency="0.04" /replace="g" variation 3199 /frequency="0.02" /replace="t" ORIGIN 1 cggggtctcg caacattgcc cagacttcct ttgtgttagt taataaagct ttctcaactg 61 cctcagcctt gtgtgagttg aggggaggtg tcacatccag ctggagtcct ttctaagcag 121 ccacagcctg atcctcccac ttcctccccc aagaaaacat tgtgggttga tggccatacc 181 ctgaggttct ggtccaaatc ggactttcta tgaccttctg ggtctctagt gaaaactaaa 241 gactcctctc cagaaaaaaa catttggttt ctaatgaggc ctggaatctt attcttgacc 301 tggggagcgg aatccctttt tgcagtactc ccgggccctc tgttggggcc tccccttcct 361 ctccagggtg gagtcgagga ggcggggctg cgggcctcct tatctctaga gccggccctg 421 gctctctggc gcggggcccc ttagtccggg ctttttgcca tggggtctct gttccctctg 481 tcgctgctgt tttttttggc ggccgcctac ccgggagttg ggagcgcgct gggacgccgg 541 actaagcggg cgcaaagccc caagggtagc cctctcgcgc cctccgggac ctcagtgccc 601 ttctgggtgc gcatgagccc ggagttcgtg gctgtgcagc cggggaagtc agtgcagctc 661 aattgcagca acagctgtcc ccagccgcag aattccagcc tccgcacccc gctgcggcaa 721 ggcaagacgc tcagagggcc gggttgggtg tcttaccagc tgctcgacgt gagggcctgg 781 agctccctcg cgcactgcct cgtgacctgc gcaggaaaaa cacgctgggc cacctccagg 841 atcaccgcct acagtgaggg acaggggctc ggtcccggct ggggtgaggg gagggggctg 901 gaagaggtgg gggaagggta gttgacagtc gctctatagg gagcgcccgc ggacctcact 961 cagaggctcc cccttgcctt agaaccgccc cacagcgtga ttttggagcc tccggtctta 1021 aagggcagga aatacacttt gcgctgccac gtgacgcagg tgttcccggt gggctacttg 1081 gtggtgaccc tgaggcatgg aagccgggtc atctattccg aaagcctgga gcgcttcacc 1141 ggcctggatc tggccaacgt gaccttgacc tacgagtttg ctgctggacc ccgcgacttc 1201 tggcagcccg tgatctgcca cgcgcgcctc aatctcgacg gcctggtggt ccgcaacagc 1261 tcggcaccca ttacactgat gctcggtgag gcacccctgt aaccctgggg actaggagga 1321 agggggcaga gagagttatg accccgagag ggcgcacaga ccaagcgtga gctccacgcg 1381 ggtcgacaga cctccctgtg ttccgttcct aattctcgcc ttctgctccc agcttggagc 1441 cccgcgccca cagctttggc ctccggttcc atcgctgccc ttgtagggat cctcctcact 1501 gtgggcgctg cgtacctatg caagtgccta gctatgaagt cccaggcgta aagggggatg 1561 ttctatgccg gctgagcgag aaaaagagga atatgaaaca atctggggaa atggccatac 1621 atggtggctg acgcctgtaa tcccagcact ttgggaggcc gaggcaggag aatcgcttga 1681 gcccaggagt tcgagaccag cctggacaac atagtgagac cccgtctatg caaaaaatac 1741 acaaattagc ctggtgtggt ggcccgcacc tgtggtccca gctacccggg aggctgagtt 1801 gggaggatcc tttgagccct gaaagtcgag gttgcagtga gccttgatcg tgccactgca 1861 ctccagcctg ggggacagag cacgaccctg tctccaaaaa taaaataaaa ataaaaataa 1921 atattggcgg gggaaccctc tggaatcaat aaaggcttcc ttaaccagcc tctgtcctgt 1981 gacctaaggg tccgcattac tgcccttctt cggaggaact ggtttgtttt tgttgttgtt 2041 gttgtttttg cgatcacttt ctccaagttc cttgtctccc tgagggcacc tgaggtttcc 2101 tcactcaggg cccacctggg gtcccgaagc cccagactct gtgtatcccc agcgggtgtc 2161 acagaaacct ctccttctgc tggccttatc gagtgggatc agcgcgggcc ggggagagcc 2221 acgggcaggg gcggggtggg gttcatggta tggctttcct gattggcgcc gccgccacca 2281 cgcggcagct ctgattggat gttaagtttc ctatcccagc cccaccttca gaccctgtgc 2341 tttcctggag gccaaacaac tgtggagcga gaactcatct ccaaaataac ttaccacgct 2401 ggagtgagac cacgaatggt ggggagggga gggtcccacg gacatattga gggacgtgga 2461 tacgcagaag aggtatccat gtggtggcag ccgggaaggg gtgatcagat ggtccacagg 2521 gaatatcaca aactcgaatt ctgacgatgt tctggtagtc acccagccag atgagcgcat 2581 ggagttgggg gtggggggtg tcaaagcttg gggcccggaa gcggagtcaa aagcatcacc 2641 ctcggtccct tgttctcgcg tggatgtcag ggcccccacc caccgagcag aaggcggact 2701 caggggcgct ccagggtggc tcgagctcac acacgctgag tagacacgtg cccgctgcac 2761 cctgggtaaa tacagacccg gagccgagcg gattctaatt tagacgcccg cgaacgctgc 2821 gcgcacgcac acgtgtcctc ggctcgctgg cactttcgtc ccgccccctc cgtcgcgtgc 2881 cggagctgac ccggaggggt gcttagaggt atggctccgc ggggtcaaaa ggagaaggat 2941 cagtgagaga ggcatcccca caccctcccc tagaactgtc ctttccccat ccagtgcctc 3001 ccaaatctct cttagtcccc aaatgtatcc ccgccctaag gggcgctggt gggaggagct 3061 aaatgtgggg gcggagctcg gagtccagct tattatcatg gcatctcagc cagggctggg 3121 gtaggggttt gggaagggca acccagcatc ccccgatccc agagtcgcgg ccggggatga 3181 cgcgagagag cgtggtcgcc cccagaaggc cctgggccat catgccggcc tccacgtaga 3241 ccccaggggt cgctcactcc tgccagctcg ccttcaccaa ggccaggagc ttagcgcacg 3301 ctcgcctccc gcccccccgc cgcctctgcc gccgccccct ccttggaaac caagttacca 3361 acgttaaacc aatccccaag cgcaactctg cctcccccac accccacccg ccgcgccgcg 3421 cggagccgtc ctctagccca gctcctcg //