Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000084 00000 ------------ G 0.50 0.65 0.58 A 0.50 0.35 0.42 0000 --- --- --- --- 000085 00000 ------------ T 0.78 0.83 0.80 C 0.23 0.17 0.20 0000 --- --- --- --- 000290 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000353 00000 ------------ C 0.91 0.83 0.87 A 0.09 0.17 0.13 0000 --- --- --- --- 000437 00000 ------------ A 0.72 0.87 0.79 G 0.28 0.13 0.21 0000 --- --- --- --- 000870 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001031 00000 ------------ - 0.00 0.12 0.05 + 1.00 0.88 0.95 0000 --- --- --- --- 001037 00000 ------------ - 0.26 0.06 0.17 + 0.74 0.94 0.82 0000 --- --- --- --- 001332 00000 ------------ A 0.74 0.39 0.57 C 0.26 0.61 0.43 0000 --- --- --- --- 001362 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001711 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001728 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001844 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001865 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001999 00029 5' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002207 00000 ------------ G 1.00 0.87 0.94 A 0.00 0.13 0.06 0000 --- --- --- --- 002358 00000 ------------ A 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 002412 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002482 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 002518 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002573 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002801 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002837 00000 ------------ - 0.14 0.00 0.07 + 0.86 1.00 0.93 0000 --- --- --- --- 002856 00000 ------------ C 0.98 0.79 0.88 A 0.02 0.21 0.12 0000 --- --- --- --- 002913 00000 ------------ T 0.98 0.78 0.88 C 0.02 0.23 0.12 0000 --- --- --- --- 003003 00000 ------------ T 0.92 0.17 0.55 C 0.08 0.83 0.45 0000 --- --- --- --- 003394 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003691 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 003902 00000 ------------ G 0.73 1.00 0.86 T 0.27 0.00 0.14 0000 --- --- --- --- 004432 00000 ------------ G 0.93 0.82 0.88 C 0.07 0.18 0.12 0000 --- --- --- --- 004831 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004988 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005142 00000 ------------ G 0.77 0.91 0.84 C 0.23 0.09 0.16 0000 --- --- --- --- 005281 00000 ------------ G 0.95 0.69 0.84 A 0.05 0.31 0.16 0000 --- --- --- --- 006063 00000 ------------ G 0.80 0.54 0.67 A 0.20 0.46 0.33 0000 --- --- --- --- 006126 00000 ------------ G 0.94 0.83 0.88 A 0.06 0.17 0.12 0000 --- --- --- --- 006218 00000 ------------ A 0.98 0.70 0.84 T 0.02 0.30 0.16 0000 --- --- --- --- 006287 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006515 00000 ------------ G 0.96 0.61 0.79 A 0.04 0.39 0.21 0000 --- --- --- --- 006519 00000 ------------ C 0.93 0.82 0.88 T 0.07 0.18 0.12 0000 --- --- --- --- 006529 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006560 00000 ------------ C 0.87 0.82 0.84 G 0.13 0.18 0.16 0000 --- --- --- --- 006707 00000 ------------ T 0.57 0.59 0.58 C 0.43 0.41 0.42 0000 --- --- --- --- 006740 00000 ------------ C 0.96 0.70 0.83 T 0.04 0.30 0.17 0000 --- --- --- --- 006830 00290 SYNON C 1.00 0.87 0.93 T 0.00 0.13 0.07 0067 GCC GCT ALA(A) ALA(A) 007185 00000 ------------ T 0.59 0.67 0.63 C 0.41 0.33 0.37 0000 --- --- --- --- 007207 00000 ------------ C 0.98 0.59 0.77 G 0.02 0.41 0.23 0000 --- --- --- --- 007337 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007631 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007790 00000 ------------ A 0.86 0.70 0.77 G 0.14 0.30 0.23 0000 --- --- --- --- 007827 00000 ------------ C 1.00 0.83 0.91 T 0.00 0.17 0.09 0000 --- --- --- --- 007887 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 008499 00000 ------------ A 0.60 0.52 0.56 G 0.40 0.48 0.44 0000 --- --- --- --- 008696 00000 ------------ A 0.88 0.70 0.79 G 0.12 0.30 0.21 0000 --- --- --- --- 008738 00000 ------------ T 0.89 0.70 0.80 G 0.11 0.30 0.20 0000 --- --- --- --- 009060 00000 ------------ G 0.63 0.95 0.78 A 0.37 0.05 0.22 0000 --- --- --- --- 009412 00000 ------------ A 0.58 0.62 0.60 T 0.42 0.38 0.40 0000 --- --- --- --- 009413 00000 ------------ A 0.59 0.62 0.61 C 0.41 0.38 0.39 0000 --- --- --- --- 009427 00000 ------------ G 0.50 0.78 0.64 A 0.50 0.23 0.36 0000 --- --- --- --- 010031 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 010296 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 010606 00000 ------------ C 0.55 0.67 0.62 A 0.45 0.33 0.38 0000 --- --- --- --- 010675 00000 ------------ C 0.95 0.98 0.96 T 0.05 0.02 0.04 0000 --- --- --- --- 010715 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 010738 00000 ------------ G 0.82 1.00 0.91 T 0.18 0.00 0.09 0000 --- --- --- --- 010751 00000 ------------ C 0.66 0.36 0.50 T 0.34 0.64 0.50 0000 --- --- --- --- 010766 00000 ------------ C 0.95 0.98 0.96 T 0.05 0.02 0.04 0000 --- --- --- --- 010767 00000 ------------ G 0.97 0.81 0.89 A 0.03 0.19 0.11 0000 --- --- --- --- 010991 00000 ------------ C 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 011087 00000 ------------ G 1.00 0.78 0.89 A 0.00 0.22 0.11 0000 --- --- --- --- 011292 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011310 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 011422 00000 ------------ G 0.83 0.78 0.81 A 0.17 0.22 0.19 0000 --- --- --- --- 011484 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 011584 00000 ------------ G 1.00 0.85 0.92 C 0.00 0.15 0.08 0000 --- --- --- --- 011770 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011833 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 011839 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 011898 00000 ------------ C 0.83 0.78 0.81 T 0.17 0.22 0.19 0000 --- --- --- --- 012020 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012052 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012184 00000 ------------ C 0.87 0.80 0.83 T 0.13 0.20 0.17 0000 --- --- --- --- 012223 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 012227 00000 ------------ G 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 012240 00000 ------------ C 0.83 0.80 0.81 A 0.17 0.20 0.19 0000 --- --- --- --- 012253 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012272 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 012326 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 012335 00000 ------------ C 0.65 0.74 0.70 T 0.35 0.26 0.30 0000 --- --- --- --- 012483 00000 ------------ C 1.00 0.82 0.90 T 0.00 0.18 0.10 0000 --- --- --- --- 012774 00000 ------------ G 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 012779 00000 ------------ T 0.77 0.72 0.75 C 0.23 0.28 0.25 0000 --- --- --- --- 013779 00000 ------------ G 0.69 0.73 0.71 A 0.31 0.27 0.29 0000 --- --- --- --- 013961 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014177 00000 ------------ C 0.81 0.77 0.79 G 0.19 0.23 0.21 0000 --- --- --- --- 014281 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 014411 00505 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0139 ACT ATT THR(T) ILE(I) 014627 00000 ------------ C 0.81 0.80 0.80 G 0.19 0.20 0.20 0000 --- --- --- --- 014997 00000 ------------ A 0.85 0.78 0.82 C 0.15 0.22 0.18 0000 --- --- --- --- 015098 00000 ------------ C 0.96 0.78 0.87 G 0.04 0.22 0.13 0000 --- --- --- --- 015142 00000 ------------ G 0.85 0.78 0.82 A 0.15 0.22 0.18 0000 --- --- --- --- 015724 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016074 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016108 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 016254 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 016294 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 016409 00000 ------------ C 0.60 0.46 0.53 T 0.40 0.54 0.47 0000 --- --- --- --- 016867 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017380 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017497 00000 ------------ T 0.88 0.93 0.90 C 0.12 0.07 0.10 0000 --- --- --- --- 017846 00000 ------------ - 0.58 0.43 0.51 + 0.42 0.57 0.49 0000 --- --- --- --- 018077 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 018093 00000 ------------ G 0.44 0.59 0.51 T 0.56 0.41 0.49 0000 --- --- --- --- 018489 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 018529 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019036 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019199 00824 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0245 CTA CTG LEU(L) LEU(L) 019341 00000 ------------ G 0.44 0.57 0.50 A 0.56 0.43 0.50 0000 --- --- --- --- 019396 00000 ------------ G 0.87 0.93 0.90 A 0.13 0.07 0.10 0000 --- --- --- --- 019559 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 019882 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 020183 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 020299 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 020321 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020434 00851 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0254 CAC CAT HIS(H) HIS(H) 020464 00881 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0264 GTG GTA VAL(V) VAL(V) 020733 00000 ------------ G 0.44 0.57 0.50 A 0.56 0.43 0.50 0000 --- --- --- --- 020893 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 021224 00000 ------------ T 0.79 0.50 0.64 A 0.21 0.50 0.36 0000 --- --- --- --- 021366 00000 ------------ G 0.50 0.74 0.62 A 0.50 0.26 0.38 0000 --- --- --- --- 021822 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 021892 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024618 00000 ------------ C 0.46 0.59 0.52 T 0.54 0.41 0.48 0000 --- --- --- --- 024662 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 025188 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 027865 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028197 00000 ------------ G 0.65 0.43 0.54 T 0.35 0.57 0.46 0000 --- --- --- --- 028592 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 028610 00000 ------------ T 0.73 0.93 0.83 C 0.27 0.07 0.17 0000 --- --- --- --- 028654 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 029096 01292 SYNON C 1.00 0.97 0.99 T 0.00 0.03 0.01 0401 AAC AAT ASN(N) ASN(N) 029528 00000 ------------ T 0.60 0.50 0.55 G 0.40 0.50 0.45 0000 --- --- --- --- 029762 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 029868 00000 ------------ A 0.57 0.59 0.58 C 0.42 0.41 0.42 0000 --- --- --- --- 029879 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 029914 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 030060 00000 ------------ A 0.90 0.93 0.92 C 0.10 0.07 0.08 0000 --- --- --- --- 030066 00000 ------------ T 0.57 0.52 0.55 C 0.43 0.48 0.45 0000 --- --- --- --- 030128 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030144 00000 ------------ G 0.62 0.57 0.60 C 0.38 0.43 0.40 0000 --- --- --- --- 030285 01446 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0453 GTC ATC VAL(V) ILE(I) 030520 01681 3' UTR T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 030595 01756 3' UTR T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 030658 01819 3' UTR A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 030745 01906 3' UTR T 0.72 0.93 0.84 G 0.28 0.07 0.16 0000 --- --- --- --- 031010 02171 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 031053 02214 3' UTR T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 031259* 031290 02451 3' UTR - 0.06 0.17 0.12 + 0.94 0.83 0.88 0000 --- --- --- --- 031400 02561 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031485 02646 3' UTR C 0.52 0.89 0.70 T 0.48 0.11 0.30 0000 --- --- --- --- 031652 02813 3' UTR - 0.00 0.15 0.07 + 1.00 0.85 0.93 0000 --- --- --- --- 031726 02887 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032328 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032719 00000 ------------ G 0.70 0.89 0.79 C 0.30 0.11 0.21 0000 --- --- --- --- 032886 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 033439 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 033878 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001031: AGG 001037: GGG 002837: TG 017846: C 021822: AT 031290: AAGAATGGTGTGGGAGAGG 031652: TCCTCCCT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 031259 02420 3' UTR A 0.38 0.20 0.29 C 0.54 0.70 0.62 T 0.08 0.11 0.10 0000 --- --- --- --- --- ---